Information report for GPA5
Gene Details
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Functional Descriptions
- Furthermore, we demonstrated that GPA5 physically interacts with a class C core vacuole/endosome tethering (CORVET) complex and a seed plant-specific VAMP727-containing R-soluble NSF attachment protein receptor (SNARE) complex.
- We show that GPA5 is a membrane-associated protein capable of forming homodimers and that it is specifically localized to DVs in developing endosperm.
- Collectively, our results suggest that GPA5 functions as a plant-specific effector of Rab5a required for mediating tethering and membrane fusion of DVs with PSVs in rice endosperm.
Literature and News
Gene Resources
- UniProt: Q0DAN4
- EMBL: AP014962, CM000143
- EnsemblPlants: Os06t0643000-01
- Gramene: Os06t0643000-01
- KEGG: osa:4341636
- Orthologous matrix: SMSNHRK
- InterPro: IPR001683, IPR036871, IPR044588
- PANTHER: PTHR46856, PTHR46856:SF1
- SUPFAM: SSF64268
- PROSITE: PS50195
- Gene3D: 3.30.1520.10
- OrthoDB: Q0DAN4
- SWISS-MODEL: Q0DAN4
- eggNOG: ENOG502QVII
Sequences
cDNA Sequence
- >LOC_Os06g43560.1
GCTTGGCTGCCACCGCCGCGCGTTGACGGTTAGACGCCACCGCGGGAGGAGAGCCCCTCCCTCCCCGTCCGCGTCCGCGTCCGCCTCATCTCCGCCGCCCTCTTACTCCCCCTCCCCTTCCTCCACTCCGTCCACCTCGGAATCGTCGGCGCGACGCCTCCAAACCCCCGCATCGATTCCTCCCTCCCACCTCACCCCACCCTTCCGCCCGCTCGATCCACCGCCGAAGCGGGCGGCGATGGCGACGCCGTCGTCGTTTTCGTCGGCGAGGAAGAAGGCGCCGAGCCCGCCGAAGCACCGCCACGACGGCACCTCCGGGCTGCCGTTCGGCATGGACTGGAGCCCGCCCCCGAAGAGATGGGAGGGAAGGAACACCATATGGCCACATAACCCTCAAACCGGATGGAGTTACTGTGTGATGATTCCTTCTTGGATCGCTCAGACACCTGAAGCTAGTGCGACTGCTGACAACTTCTTGAAATCCATAGTTTTTTACAGGATACATGTTGGTATACAATCTCCAGAAGGCATCAGCTCTAGCCACGGAGTTCTTCGAAGGTTTAGTGACTTTCTAAAGTTATCTTCTGATCTTAAGCAGGAATTTCCCAGAAAAGGAATCCCCCCTGCTCCACCGAAGCATGCCTTTTCAAGAATAAATTCAAGCAGGGTGCTTCTAGAAGAGAGAAGGAACGCTTTGGAGGAGTGGATGCAAAAGCTACTTTCTGACATTGAGTTGTCGAGAAGTGCACCTGTTGCTGCTTTTCTTGAGCTGGAAGCTGCTGCACGCTCATATTACCAAGATTGGAATCAGCGCCCTTCTGAAGTGGGTTCTTCAGCAAAAAGTAGTGCAGATTCTTCTCCGCGTCCTGATGAACATGGTTCAGGTGTTCTCTCTGAGTCCAGTCAAATGAATTCAGCCTTTGCTCATGGTAACGGTCCGACAGGAGCAACTGGTAATGGTATGCTGGGAGAGTCTATCTTAGATCAGCCCAATGAGCGGGCTAGTAGCATGTCAAATCACAGGAAAAAGAACCATGTCTTTTTGGAACATGGTGTTAGGAATGGTTCCATAGATACTTATAAGGGAGTGGTTTCCGAAGAGGATCACGATTCTAACCCTGGCCATGCCAGGAAGGACTCTGCTGAAAGTATAGGAAGTGATTTGAGTTCTTTGAGGGGCAGTGAATTATCGGTTCCTGGAGTTAGTAGTTCCCTTTGGGATGGTCCTGTGGATCTTCCAAGTGGAATTGATGGACATAGCCAAACAGAACAATTTACAGGTTTAGATATGCAGCTTTTATATGATATGGATGCACAAATCATCCTTCCTGCTGATCAAAGGCCGAAGTTGACTAGACTTTTGATCAGCATGGACAGAAGACAGGTGACAGCAAAAACTGATATGGAGGATCTCATAGCACGACTAAATCAGGAAGTGGCTGTCAAAGAATATCTTGCGACAAAGGTCAAAGATTTGGAGGTTGAGTTGGAAGCTACGAAGAAAAAAGACAAAGAGATTCTACATCAGGCTGTTTTGACCGAAAGAGAGAAAATTACCCAACTTCAATGGGATAAGGATGAGCTCTACAGGAAGTACTCTGAAATGGAGTCAAACCTGAAGATTGAACAAAATGAGAAAACTCGTGTGCAGTCAGAGAAAACAACTGCTAGCGGTGAAAAAGAAATGTTACTGGAAGAGCTAGAAACTAAACGAAAAGAAGTTGAGAGTTTGCAGCAACATATTGGAGAATTCGAGGCAAAGTCTAAAGCAGATATAAAAGTTCTTGTTAAAGAGGTGAAATCTCTTCGGAACTCCCAAAAAGAGATGAAGAAAGTGCTGAATCAGTATCATGAGGAGAAGACTGAATTAGAGAGGATTGTTAACAGGGAGAAACAGCGGTCAACACGTGCAAGGTTCTCCCGTGAAAAAATTCTTCACGAATGCAGACTGCTCCGTGAGCGTCTACAGGAATGTACTGCCAAGTTTGTTGCAGATGAGCAAGACACTATGACTATTGATTTATCATCTTTGCCTGATGCTTTAGATCTTGTGACGACATCAGACAATAGAATACGTTTGCTTGTTGCTGAGGCTCAACTTCTGTCACGAGATGATGAACAGGGCTCTTCTGATGATGGTGATAATTCTGATGGTAAATCCTCAGTTACCATGAGCAGTGAAGATGCATATGTTACTGATGAAGAGACAACAAAAATGTTATCTGATCTGCTTATTGACAATGCACAACTGAGGTTGCGCTTGAATTCTCTCATCCGTAATGCTGTAAATACTGCTGTGAAGACGGAGAAAGAAGGTAGTGATGGAACCGTGCCAAAAAAGACGGTGCTTAATTGGTTATTGGACAGATAGAAAAACCAGTATATATTCTTGTGAATTAGCTCTTCTAGTTATGCGGCCTTCTCAAAGTTATATGATGAGTATTGTTATAATGTGGGAGTAACAGGAGTGGAGAAAAAAAAATCAAAATCTTCCTTACATGCAGATCAAGCATGTGGTGGTGTTGTATCTCTTATTTACAAAGATTGATCAAGGATAATATATTTAGGAGGCTTCTGAGCCTGGCCTCCTAGCGGGAGAACGGTAGGGCTCATATGGTTTTGGGGAGGCTTGCAACTGGAGTGGTAGAGAACATGGGTCCCCCTTTTTTGCACCATACTTCAATTTGTAATTGCCGAGCTGATGGATAGCTGCATGGTTGTATCTTTGTACAGATGTTTCAGATGGTGAGTTCCCAGCAGGAAAGCATTGTACACTATAGTTAAACTCTGGATTAATCTTCTTCACCCATAGAGTGCTCAACTGTTAAATCAGTACTTCTTACTCATGCAGTTGCACCTCTTCCAGACTGAAAACTTCTCAAAGTTCTCATGTTGCATACAGCTGGTAATAAGAGCGTAATTTACTCAGGCATGGACACCTGACCCTGCCTGATGTTTAGATC
CDS Sequence
- >LOC_Os06g43560.1
ATGGCGACGCCGTCGTCGTTTTCGTCGGCGAGGAAGAAGGCGCCGAGCCCGCCGAAGCACCGCCACGACGGCACCTCCGGGCTGCCGTTCGGCATGGACTGGAGCCCGCCCCCGAAGAGATGGGAGGGAAGGAACACCATATGGCCACATAACCCTCAAACCGGATGGAGTTACTGTGTGATGATTCCTTCTTGGATCGCTCAGACACCTGAAGCTAGTGCGACTGCTGACAACTTCTTGAAATCCATAGTTTTTTACAGGATACATGTTGGTATACAATCTCCAGAAGGCATCAGCTCTAGCCACGGAGTTCTTCGAAGGTTTAGTGACTTTCTAAAGTTATCTTCTGATCTTAAGCAGGAATTTCCCAGAAAAGGAATCCCCCCTGCTCCACCGAAGCATGCCTTTTCAAGAATAAATTCAAGCAGGGTGCTTCTAGAAGAGAGAAGGAACGCTTTGGAGGAGTGGATGCAAAAGCTACTTTCTGACATTGAGTTGTCGAGAAGTGCACCTGTTGCTGCTTTTCTTGAGCTGGAAGCTGCTGCACGCTCATATTACCAAGATTGGAATCAGCGCCCTTCTGAAGTGGGTTCTTCAGCAAAAAGTAGTGCAGATTCTTCTCCGCGTCCTGATGAACATGGTTCAGGTGTTCTCTCTGAGTCCAGTCAAATGAATTCAGCCTTTGCTCATGGTAACGGTCCGACAGGAGCAACTGGTAATGGTATGCTGGGAGAGTCTATCTTAGATCAGCCCAATGAGCGGGCTAGTAGCATGTCAAATCACAGGAAAAAGAACCATGTCTTTTTGGAACATGGTGTTAGGAATGGTTCCATAGATACTTATAAGGGAGTGGTTTCCGAAGAGGATCACGATTCTAACCCTGGCCATGCCAGGAAGGACTCTGCTGAAAGTATAGGAAGTGATTTGAGTTCTTTGAGGGGCAGTGAATTATCGGTTCCTGGAGTTAGTAGTTCCCTTTGGGATGGTCCTGTGGATCTTCCAAGTGGAATTGATGGACATAGCCAAACAGAACAATTTACAGGTTTAGATATGCAGCTTTTATATGATATGGATGCACAAATCATCCTTCCTGCTGATCAAAGGCCGAAGTTGACTAGACTTTTGATCAGCATGGACAGAAGACAGGTGACAGCAAAAACTGATATGGAGGATCTCATAGCACGACTAAATCAGGAAGTGGCTGTCAAAGAATATCTTGCGACAAAGGTCAAAGATTTGGAGGTTGAGTTGGAAGCTACGAAGAAAAAAGACAAAGAGATTCTACATCAGGCTGTTTTGACCGAAAGAGAGAAAATTACCCAACTTCAATGGGATAAGGATGAGCTCTACAGGAAGTACTCTGAAATGGAGTCAAACCTGAAGATTGAACAAAATGAGAAAACTCGTGTGCAGTCAGAGAAAACAACTGCTAGCGGTGAAAAAGAAATGTTACTGGAAGAGCTAGAAACTAAACGAAAAGAAGTTGAGAGTTTGCAGCAACATATTGGAGAATTCGAGGCAAAGTCTAAAGCAGATATAAAAGTTCTTGTTAAAGAGGTGAAATCTCTTCGGAACTCCCAAAAAGAGATGAAGAAAGTGCTGAATCAGTATCATGAGGAGAAGACTGAATTAGAGAGGATTGTTAACAGGGAGAAACAGCGGTCAACACGTGCAAGGTTCTCCCGTGAAAAAATTCTTCACGAATGCAGACTGCTCCGTGAGCGTCTACAGGAATGTACTGCCAAGTTTGTTGCAGATGAGCAAGACACTATGACTATTGATTTATCATCTTTGCCTGATGCTTTAGATCTTGTGACGACATCAGACAATAGAATACGTTTGCTTGTTGCTGAGGCTCAACTTCTGTCACGAGATGATGAACAGGGCTCTTCTGATGATGGTGATAATTCTGATGGTAAATCCTCAGTTACCATGAGCAGTGAAGATGCATATGTTACTGATGAAGAGACAACAAAAATGTTATCTGATCTGCTTATTGACAATGCACAACTGAGGTTGCGCTTGAATTCTCTCATCCGTAATGCTGTAAATACTGCTGTGAAGACGGAGAAAGAAGGTAGTGATGGAACCGTGCCAAAAAAGACGGTGCTTAATTGGTTATTGGACAGATAG
Protein Sequence
- >LOC_Os06g43560.1
MATPSSFSSARKKAPSPPKHRHDGTSGLPFGMDWSPPPKRWEGRNTIWPHNPQTGWSYCVMIPSWIAQTPEASATADNFLKSIVFYRIHVGIQSPEGISSSHGVLRRFSDFLKLSSDLKQEFPRKGIPPAPPKHAFSRINSSRVLLEERRNALEEWMQKLLSDIELSRSAPVAAFLELEAAARSYYQDWNQRPSEVGSSAKSSADSSPRPDEHGSGVLSESSQMNSAFAHGNGPTGATGNGMLGESILDQPNERASSMSNHRKKNHVFLEHGVRNGSIDTYKGVVSEEDHDSNPGHARKDSAESIGSDLSSLRGSELSVPGVSSSLWDGPVDLPSGIDGHSQTEQFTGLDMQLLYDMDAQIILPADQRPKLTRLLISMDRRQVTAKTDMEDLIARLNQEVAVKEYLATKVKDLEVELEATKKKDKEILHQAVLTEREKITQLQWDKDELYRKYSEMESNLKIEQNEKTRVQSEKTTASGEKEMLLEELETKRKEVESLQQHIGEFEAKSKADIKVLVKEVKSLRNSQKEMKKVLNQYHEEKTELERIVNREKQRSTRARFSREKILHECRLLRERLQECTAKFVADEQDTMTIDLSSLPDALDLVTTSDNRIRLLVAEAQLLSRDDEQGSSDDGDNSDGKSSVTMSSEDAYVTDEETTKMLSDLLIDNAQLRLRLNSLIRNAVNTAVKTEKEGSDGTVPKKTVLNWLLDR*