Gene Details:
- MSU gene ID: LOC_Os06g42700
- RAPdb gene ID: Os06g0633500
- Gene Symbol: OsCLR1 DSNP1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- These results indicate the positive regulation of OsCLR1 in response to salt and drought in an ABA-dependent manner.
- Accompanying the decreased foci of HEI10, ZIP4, and MER3 on meiotic chromosomes, the number of crossovers (COs) decreases dramatically in DSNP1 meiocytes.
- The E3 ubiquitin ligase DESYNAPSIS1 regulates synapsis and recombination in rice meiosis.
- Here, we reveal that a functional RING finger E3 ubiquitin ligase, DESYNAPSIS1 (DSNP1), plays significant roles in SC assembly and homologous recombination during rice meiosis.
Function-related keywords:
- drought , salt , meiotic , synapsis , recombination , meiosis , homologous-recombination
Literature:
- Molecular Functions of Rice Cytosol-Localized RING Finger Protein 1 in Response to Salt and Drought and Comparative Analysis of Its Grass Orthologs . DOI: 10.1093/pcp/pcz133 ; PMID: 31292649
- The E3 ubiquitin ligase DESYNAPSIS1 regulates synapsis and recombination in rice meiosis . DOI: 10.1016/j.celrep.2021.109941 ; PMID: 34731625
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g42700.1
GACTGACCCCGCCGGGCCCAACCTAACCAAACTCGAGACGGGGACGCCACGCCTCCCTCCCACGCGGTCGCGACCCATGGAGGAGGAGATCGCCGCCGACGACCTCTTCCTCGACGCCGCCGCCGACCACCACCCCGCCGGCTTCTCCTCTTCCTCCTCCTCCTACTTCGCCTCCTTCTCCGAGGTGGTCGAGGAGGAGGACGAGGAGCGCCACCCCCACCCCCACCACCGCCTCCTCCTCGACGACGACGCGGCGGGGTTCGACCACGACGAAACCCTAGCCGCCCCCGCGCCCGCCCCGGGCTCCCCGTTCTCCTTCGCCTCCGACCCCGACCCCGACCCCGACATCGACCTCGAGCTCCGCCTCTCCTCCCGCTCCCCTCCCTTCTGGGACTGCCTCGAGGACGACCTCGCCGACGAGGAGATGGTCGGGGGCGGATTCGAGTGGGAGGAGATCGCCGACGCCGCTGTCCCTGCCCCCGGAGCCGTCGCTGCTGGTGGTGGTGGTGGTGGTGGAGGAGGAGATGGGGGCCTTGTTGGGGACGGCGACGTGTTCGGGTTCCTCGACGAGAGGGAGATCCTCGGCGCGATGGAGGGGCTCGACAGCGGCGACGACGAATCGGGGTTCTCCGACGAGCCGTTCGACTTCGGCGACGAGGGGGACGACATAGGGGACATCTTCCGGAGCGTGGGGTGGGAGGTGCTCCCGGTGCCGCTGGACGAGGACGACTTCGAGGTGCTGCCGGGGCACGTCGCGGACGCCGCGGCGGGAGGGGCGCCCCCCGCGGCGCGCGCGGCGGTGGAGCGGCTCCAGGTGGTGGCGGTCGGCGGCGGCGGGGAGGAGGCGGCGGCGGCGTCGCGGGGTTGCGCTGTGTGCAAGGACGGGATCGCGCAGGGGGAGCTCGCCACGCAGCTGCCGTGCGCGCACTTGTACCACGGGGCGTGCATCGAACCGTGGCTCGCCATCCGGAACTCGTGTCCGGTGTGCCGTTACGAGCTGCCCACCGATGACCCCGAGTACGAGAAGCGGCGGGTGAAGCGGCGTTCTTCTGGTGACTCCGTGGCGCAATTGGGTACTCCTATGCAAATTTGAGCTAGGATTGCTTGGTGATATGTGTTGGTTGCAATTCCGTGGAATTGAGAAACTTCACTCTCTAACTGCTCATTGGGATGCTTCGAGAGTGTCATACCTCTTTGATCTCAAAACTTTTTAGTGCGTAGCTGTCATGATTGGTAATTGAACGGTAAGAACAATTGCTAGAATTTAGAACTGCTGTAAATACGTTGTGCTGCTCCAATAATACAGAAAATTGTTTCAATGTTTCCCCAGAA
CDS Sequence
- >LOC_Os06g42700.1
ATGGAGGAGGAGATCGCCGCCGACGACCTCTTCCTCGACGCCGCCGCCGACCACCACCCCGCCGGCTTCTCCTCTTCCTCCTCCTCCTACTTCGCCTCCTTCTCCGAGGTGGTCGAGGAGGAGGACGAGGAGCGCCACCCCCACCCCCACCACCGCCTCCTCCTCGACGACGACGCGGCGGGGTTCGACCACGACGAAACCCTAGCCGCCCCCGCGCCCGCCCCGGGCTCCCCGTTCTCCTTCGCCTCCGACCCCGACCCCGACCCCGACATCGACCTCGAGCTCCGCCTCTCCTCCCGCTCCCCTCCCTTCTGGGACTGCCTCGAGGACGACCTCGCCGACGAGGAGATGGTCGGGGGCGGATTCGAGTGGGAGGAGATCGCCGACGCCGCTGTCCCTGCCCCCGGAGCCGTCGCTGCTGGTGGTGGTGGTGGTGGTGGAGGAGGAGATGGGGGCCTTGTTGGGGACGGCGACGTGTTCGGGTTCCTCGACGAGAGGGAGATCCTCGGCGCGATGGAGGGGCTCGACAGCGGCGACGACGAATCGGGGTTCTCCGACGAGCCGTTCGACTTCGGCGACGAGGGGGACGACATAGGGGACATCTTCCGGAGCGTGGGGTGGGAGGTGCTCCCGGTGCCGCTGGACGAGGACGACTTCGAGGTGCTGCCGGGGCACGTCGCGGACGCCGCGGCGGGAGGGGCGCCCCCCGCGGCGCGCGCGGCGGTGGAGCGGCTCCAGGTGGTGGCGGTCGGCGGCGGCGGGGAGGAGGCGGCGGCGGCGTCGCGGGGTTGCGCTGTGTGCAAGGACGGGATCGCGCAGGGGGAGCTCGCCACGCAGCTGCCGTGCGCGCACTTGTACCACGGGGCGTGCATCGAACCGTGGCTCGCCATCCGGAACTCGTGTCCGGTGTGCCGTTACGAGCTGCCCACCGATGACCCCGAGTACGAGAAGCGGCGGGTGAAGCGGCGTTCTTCTGGTGACTCCGTGGCGCAATTGGGTACTCCTATGCAAATTTGA
Protein Sequence
- >LOC_Os06g42700.1
MEEEIAADDLFLDAAADHHPAGFSSSSSSYFASFSEVVEEEDEERHPHPHHRLLLDDDAAGFDHDETLAAPAPAPGSPFSFASDPDPDPDIDLELRLSSRSPPFWDCLEDDLADEEMVGGGFEWEEIADAAVPAPGAVAAGGGGGGGGGDGGLVGDGDVFGFLDEREILGAMEGLDSGDDESGFSDEPFDFGDEGDDIGDIFRSVGWEVLPVPLDEDDFEVLPGHVADAAAGGAPPAARAAVERLQVVAVGGGGEEAAAASRGCAVCKDGIAQGELATQLPCAHLYHGACIEPWLAIRNSCPVCRYELPTDDPEYEKRRVKRRSSGDSVAQLGTPMQI*