Information report for OsCOM1
Gene Details
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Functional Descriptions
- Several key meiotic proteins, including ZEP1 and OsMER3, were not loaded normally onto chromosomes in OsCOM1 mutants, whereas the localization of OsREC8, PAIR2 and PAIR3 seemed to be normal.
- Moreover, OsCOM1 was loaded normally onto meiotic chromosomes in Osrec8, zep1 and Osmer3 mutants, but could not be properly loaded in Osam1, pair2 and OsSPO11-1(RNAi) plants.
- These results provide direct evidence for the functions of OsCOM1 in promoting homologous synapsis and recombination in rice meiosis.
- The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis.
Literature and News
- The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis . DOI: 10.1111/j.1365-313X.2012.05025.x ; PMID: 22507309
- COM1, a factor of alternative non-homologous end joining, lagging behind the classic non-homologous end joining pathway in rice somatic cells . DOI: 10.1111/tpj.14715 ; PMID: 32022972
Gene Resources
- UniProt: B9FU48
- EMBL: AP014962
- AlphaFoldDB: B9FU48
- EnsemblPlants: Os06t0613400-01
- Gramene: Os06t0613400-01
- KEGG: osa:4341524
Sequences
cDNA Sequence
- >LOC_Os06g41050.1
GAAAAGCTTTCTCCCCCATTTCAAGCGGCGCGAACGGCGGCGGCGGCCGGCGAGGAGGGCGACGGCTAGGGTTTTTCTCTCTCTCCGCCGCCGAAATCGAATCCCCGAGGTGAGCTCCATCTCATACCCACCGAGTCTCACCGTCCCGACCCATCTCCTTCACCCGCCGCCGCCGCCTGCGCTGCCCCGCCGATCACCGTGAGCTGCTGCAGCTTCCGCCTCCGAGATGAATGCGAATGTGTTGGGCGGCGATGTGGTGGCGGACGATTTCAACTACTTCTCCGGTGTGAGCACCATCTTTGTGGCCAACATCCAGGAGGTGAAGGACCGGGTTTCCCAGATCGAGCTCCTCTTCTGCAGCCAGCTCTTCCCTCATGTCCAGGCCATGTGGAAGGCGGCCAAGGATGCGTGGATGGAGAGGGAGGCCGCCCTATTGAGCCAATTGGAGGAGCTGAGCAGCGGGAAGCGGCACGCGGAGGAGAAGGCGCTGCAGCTGGGGTGCTCCCTTGATGAGATGAAGGGGAAGCTTGCGGATGCCGAGCGATCGGTCGCGGGGCATGAGGTTGAGAAGAAGCGGCTTCTGGGGAGATTGGAGGAGGAAATTGGGAACAAAGATGAGGTTATTCGCCGGCTAGAGAGGGAGATTGCGGAGAAGGCTGCTGATTTTTCCAGGGAGAGAGATGCCCATCAGAGGCTTTTGCAGCTGGTTGAGTTGAAGGACAAGAATTTGCTTCTCGAGCAGAATAAACGGAGGGATGCGGAGGAGATGGCACTGCAGCTGGGGAACTCTCTTGAGGATATGAAGGGGAACTTTGAGCGATTGATCGCGAGGCATGAGGTTGAGAAGGAGCGAATTCCGGGGAGGTTGGAGGAGGAAATGGGGAAAAAGGATGAGGTTATTGGGCGGCTAGAGAGCGAGATTGCGGAGAAGGCTGCTGATGTCTCTAGGGAAAGAGATGCCCATCAGAGGATGCTGCAGCAGGTTGAGTTGAAGGATAAGGATCTGCTTCTCGAGCAGAATAAGCGGAAGGACCTGATCGAGGATTACACTAAGCTGAAGACACTCTACAAGGATTTGAAGTCTCAGTACAACTTTCTTGTTGGAAAGATTGGCCAGAATGAAGGCTCCAAGTCTCCTGTAGTCAATGTGGTGGATCGGAAAACCTCCGGAAGCCCTCCAAGCAAGAGAAAGCTCAAAGATCTGGTGGACACTAAAAAGGAGAACAATCAGGCAGTATCTAAGACTGTAGATGAGAAAAATGGTCCTGCTTCAAGTGCAAAGGCACAAGGTACCCACCATGCTAGCTCAGTCAGGAGTCCATTCAGTAACTCGCGCCTTTGTCTACCGTCTCGTACAACCAATCCTCCACCAAAGAATGCTACTAGCAATTCAAAAACAGAGGCAGCATCTAGTTTCACCCGCCCAAGTCTACACTGGAGGGAGACTCGCGCGCGTAAAGAACCAGGCGTTGTAGATCCACATGATGATTTCCTTGACACACCTCTGGAGGCTGTCAAAAATATGATCAGGAATCCTAAAACGCCAGAAGAAGCACAAGCCCTTGCTGCCTCTCCTCCTAAAGATATGGACTTCAATAACTCTGATGATGAGACTCAAGATGTCAATATTGCCACCCAGGGCCAGAAAAACATGCCAGTTCCCAAGCAGCAAAGTACAATTTCAATCCAACCACCAAATAAAGGTTTCAAATACACAGAACCTGTAAGAAAAAAGGCTGACCGGGAGAATCTGAAAGGCGTTGAGTGCAAGCAGTGCAAGAAATTCTATGATGCTGTTCTTCCAGATGGCCGCACAAATGGTGACGGTGTGGACTCTACAAGCATGAGGTGTGAGCATCATGATGGCGTATCCAGACATCGCTACAGGTACGCGCCGCCGCTGACACCTGAAGGGTTTTGGAACATTGGGTTTGAATCAGAAATGTAGCACATGAAGTATGATGCGCTCTTCATTGATTAGTGCAGTGTCGTGCCCTAACATAGGTTCTCAGTCACCCCCCAGATACTGTTAATAATGTCAGTAGTAAATCTCATGCTGGGGAAATGATCATTTCTTTTTTTAAGATTATATGTTTGGATAGAATGCCAATTTGTTGAAGATAGAATGTACTTACTGTCACATCGATTCTATGTAAATGACATCTGACATTGAAAAGCAGTCGAATAATCTTGAATAACAAGCGTTATAACGTTACTTG
CDS Sequence
- >LOC_Os06g41050.1
ATGAATGCGAATGTGTTGGGCGGCGATGTGGTGGCGGACGATTTCAACTACTTCTCCGGTGTGAGCACCATCTTTGTGGCCAACATCCAGGAGGTGAAGGACCGGGTTTCCCAGATCGAGCTCCTCTTCTGCAGCCAGCTCTTCCCTCATGTCCAGGCCATGTGGAAGGCGGCCAAGGATGCGTGGATGGAGAGGGAGGCCGCCCTATTGAGCCAATTGGAGGAGCTGAGCAGCGGGAAGCGGCACGCGGAGGAGAAGGCGCTGCAGCTGGGGTGCTCCCTTGATGAGATGAAGGGGAAGCTTGCGGATGCCGAGCGATCGGTCGCGGGGCATGAGGTTGAGAAGAAGCGGCTTCTGGGGAGATTGGAGGAGGAAATTGGGAACAAAGATGAGGTTATTCGCCGGCTAGAGAGGGAGATTGCGGAGAAGGCTGCTGATTTTTCCAGGGAGAGAGATGCCCATCAGAGGCTTTTGCAGCTGGTTGAGTTGAAGGACAAGAATTTGCTTCTCGAGCAGAATAAACGGAGGGATGCGGAGGAGATGGCACTGCAGCTGGGGAACTCTCTTGAGGATATGAAGGGGAACTTTGAGCGATTGATCGCGAGGCATGAGGTTGAGAAGGAGCGAATTCCGGGGAGGTTGGAGGAGGAAATGGGGAAAAAGGATGAGGTTATTGGGCGGCTAGAGAGCGAGATTGCGGAGAAGGCTGCTGATGTCTCTAGGGAAAGAGATGCCCATCAGAGGATGCTGCAGCAGGTTGAGTTGAAGGATAAGGATCTGCTTCTCGAGCAGAATAAGCGGAAGGACCTGATCGAGGATTACACTAAGCTGAAGACACTCTACAAGGATTTGAAGTCTCAGTACAACTTTCTTGTTGGAAAGATTGGCCAGAATGAAGGCTCCAAGTCTCCTGTAGTCAATGTGGTGGATCGGAAAACCTCCGGAAGCCCTCCAAGCAAGAGAAAGCTCAAAGATCTGGTGGACACTAAAAAGGAGAACAATCAGGCAGTATCTAAGACTGTAGATGAGAAAAATGGTCCTGCTTCAAGTGCAAAGGCACAAGGTACCCACCATGCTAGCTCAGTCAGGAGTCCATTCAGTAACTCGCGCCTTTGTCTACCGTCTCGTACAACCAATCCTCCACCAAAGAATGCTACTAGCAATTCAAAAACAGAGGCAGCATCTAGTTTCACCCGCCCAAGTCTACACTGGAGGGAGACTCGCGCGCGTAAAGAACCAGGCGTTGTAGATCCACATGATGATTTCCTTGACACACCTCTGGAGGCTGTCAAAAATATGATCAGGAATCCTAAAACGCCAGAAGAAGCACAAGCCCTTGCTGCCTCTCCTCCTAAAGATATGGACTTCAATAACTCTGATGATGAGACTCAAGATGTCAATATTGCCACCCAGGGCCAGAAAAACATGCCAGTTCCCAAGCAGCAAAGTACAATTTCAATCCAACCACCAAATAAAGGTTTCAAATACACAGAACCTGTAAGAAAAAAGGCTGACCGGGAGAATCTGAAAGGCGTTGAGTGCAAGCAGTGCAAGAAATTCTATGATGCTGTTCTTCCAGATGGCCGCACAAATGGTGACGGTGTGGACTCTACAAGCATGAGGTGTGAGCATCATGATGGCGTATCCAGACATCGCTACAGGTACGCGCCGCCGCTGACACCTGAAGGGTTTTGGAACATTGGGTTTGAATCAGAAATGTAG
Protein Sequence
- >LOC_Os06g41050.1
MNANVLGGDVVADDFNYFSGVSTIFVANIQEVKDRVSQIELLFCSQLFPHVQAMWKAAKDAWMEREAALLSQLEELSSGKRHAEEKALQLGCSLDEMKGKLADAERSVAGHEVEKKRLLGRLEEEIGNKDEVIRRLEREIAEKAADFSRERDAHQRLLQLVELKDKNLLLEQNKRRDAEEMALQLGNSLEDMKGNFERLIARHEVEKERIPGRLEEEMGKKDEVIGRLESEIAEKAADVSRERDAHQRMLQQVELKDKDLLLEQNKRKDLIEDYTKLKTLYKDLKSQYNFLVGKIGQNEGSKSPVVNVVDRKTSGSPPSKRKLKDLVDTKKENNQAVSKTVDEKNGPASSAKAQGTHHASSVRSPFSNSRLCLPSRTTNPPPKNATSNSKTEAASSFTRPSLHWRETRARKEPGVVDPHDDFLDTPLEAVKNMIRNPKTPEEAQALAASPPKDMDFNNSDDETQDVNIATQGQKNMPVPKQQSTISIQPPNKGFKYTEPVRKKADRENLKGVECKQCKKFYDAVLPDGRTNGDGVDSTSMRCEHHDGVSRHRYRYAPPLTPEGFWNIGFESEM*