Gene Details:
- MSU gene ID: LOC_Os06g41050
- RAPdb gene ID: Os06g0613400
- Gene Symbol: OsCOM1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Several key meiotic proteins, including ZEP1 and OsMER3, were not loaded normally onto chromosomes in OsCOM1 mutants, whereas the localization of OsREC8, PAIR2 and PAIR3 seemed to be normal.
- Moreover, OsCOM1 was loaded normally onto meiotic chromosomes in Osrec8, zep1 and Osmer3 mutants, but could not be properly loaded in Osam1, pair2 and OsSPO11-1(RNAi) plants.
- These results provide direct evidence for the functions of OsCOM1 in promoting homologous synapsis and recombination in rice meiosis.
- The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis.
Function-related keywords:
Literature:
- The role of OsCOM1 in homologous chromosome synapsis and recombination in rice meiosis . DOI: 10.1111/j.1365-313X.2012.05025.x ; PMID: 22507309
- COM1, a factor of alternative non-homologous end joining, lagging behind the classic non-homologous end joining pathway in rice somatic cells . DOI: 10.1111/tpj.14715 ; PMID: 32022972
Related News:
Gene Resources:
- NCBI ID: AK119314
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os06g41050.1
GAAAAGCTTTCTCCCCCATTTCAAGCGGCGCGAACGGCGGCGGCGGCCGGCGAGGAGGGCGACGGCTAGGGTTTTTCTCTCTCTCCGCCGCCGAAATCGAATCCCCGAGGTGAGCTCCATCTCATACCCACCGAGTCTCACCGTCCCGACCCATCTCCTTCACCCGCCGCCGCCGCCTGCGCTGCCCCGCCGATCACCGTGAGCTGCTGCAGCTTCCGCCTCCGAGATGAATGCGAATGTGTTGGGCGGCGATGTGGTGGCGGACGATTTCAACTACTTCTCCGGTGTGAGCACCATCTTTGTGGCCAACATCCAGGAGGTGAAGGACCGGGTTTCCCAGATCGAGCTCCTCTTCTGCAGCCAGCTCTTCCCTCATGTCCAGGCCATGTGGAAGGCGGCCAAGGATGCGTGGATGGAGAGGGAGGCCGCCCTATTGAGCCAATTGGAGGAGCTGAGCAGCGGGAAGCGGCACGCGGAGGAGAAGGCGCTGCAGCTGGGGTGCTCCCTTGATGAGATGAAGGGGAAGCTTGCGGATGCCGAGCGATCGGTCGCGGGGCATGAGGTTGAGAAGAAGCGGCTTCTGGGGAGATTGGAGGAGGAAATTGGGAACAAAGATGAGGTTATTCGCCGGCTAGAGAGGGAGATTGCGGAGAAGGCTGCTGATTTTTCCAGGGAGAGAGATGCCCATCAGAGGCTTTTGCAGCTGGTTGAGTTGAAGGACAAGAATTTGCTTCTCGAGCAGAATAAACGGAGGGATGCGGAGGAGATGGCACTGCAGCTGGGGAACTCTCTTGAGGATATGAAGGGGAACTTTGAGCGATTGATCGCGAGGCATGAGGTTGAGAAGGAGCGAATTCCGGGGAGGTTGGAGGAGGAAATGGGGAAAAAGGATGAGGTTATTGGGCGGCTAGAGAGCGAGATTGCGGAGAAGGCTGCTGATGTCTCTAGGGAAAGAGATGCCCATCAGAGGATGCTGCAGCAGGTTGAGTTGAAGGATAAGGATCTGCTTCTCGAGCAGAATAAGCGGAAGGACCTGATCGAGGATTACACTAAGCTGAAGACACTCTACAAGGATTTGAAGTCTCAGTACAACTTTCTTGTTGGAAAGATTGGCCAGAATGAAGGCTCCAAGTCTCCTGTAGTCAATGTGGTGGATCGGAAAACCTCCGGAAGCCCTCCAAGCAAGAGAAAGCTCAAAGATCTGGTGGACACTAAAAAGGAGAACAATCAGGCAGTATCTAAGACTGTAGATGAGAAAAATGGTCCTGCTTCAAGTGCAAAGGCACAAGGTACCCACCATGCTAGCTCAGTCAGGAGTCCATTCAGTAACTCGCGCCTTTGTCTACCGTCTCGTACAACCAATCCTCCACCAAAGAATGCTACTAGCAATTCAAAAACAGAGGCAGCATCTAGTTTCACCCGCCCAAGTCTACACTGGAGGGAGACTCGCGCGCGTAAAGAACCAGGCGTTGTAGATCCACATGATGATTTCCTTGACACACCTCTGGAGGCTGTCAAAAATATGATCAGGAATCCTAAAACGCCAGAAGAAGCACAAGCCCTTGCTGCCTCTCCTCCTAAAGATATGGACTTCAATAACTCTGATGATGAGACTCAAGATGTCAATATTGCCACCCAGGGCCAGAAAAACATGCCAGTTCCCAAGCAGCAAAGTACAATTTCAATCCAACCACCAAATAAAGGTTTCAAATACACAGAACCTGTAAGAAAAAAGGCTGACCGGGAGAATCTGAAAGGCGTTGAGTGCAAGCAGTGCAAGAAATTCTATGATGCTGTTCTTCCAGATGGCCGCACAAATGGTGACGGTGTGGACTCTACAAGCATGAGGTGTGAGCATCATGATGGCGTATCCAGACATCGCTACAGGTACGCGCCGCCGCTGACACCTGAAGGGTTTTGGAACATTGGGTTTGAATCAGAAATGTAGCACATGAAGTATGATGCGCTCTTCATTGATTAGTGCAGTGTCGTGCCCTAACATAGGTTCTCAGTCACCCCCCAGATACTGTTAATAATGTCAGTAGTAAATCTCATGCTGGGGAAATGATCATTTCTTTTTTTAAGATTATATGTTTGGATAGAATGCCAATTTGTTGAAGATAGAATGTACTTACTGTCACATCGATTCTATGTAAATGACATCTGACATTGAAAAGCAGTCGAATAATCTTGAATAACAAGCGTTATAACGTTACTTG
CDS Sequence
- >LOC_Os06g41050.1
ATGAATGCGAATGTGTTGGGCGGCGATGTGGTGGCGGACGATTTCAACTACTTCTCCGGTGTGAGCACCATCTTTGTGGCCAACATCCAGGAGGTGAAGGACCGGGTTTCCCAGATCGAGCTCCTCTTCTGCAGCCAGCTCTTCCCTCATGTCCAGGCCATGTGGAAGGCGGCCAAGGATGCGTGGATGGAGAGGGAGGCCGCCCTATTGAGCCAATTGGAGGAGCTGAGCAGCGGGAAGCGGCACGCGGAGGAGAAGGCGCTGCAGCTGGGGTGCTCCCTTGATGAGATGAAGGGGAAGCTTGCGGATGCCGAGCGATCGGTCGCGGGGCATGAGGTTGAGAAGAAGCGGCTTCTGGGGAGATTGGAGGAGGAAATTGGGAACAAAGATGAGGTTATTCGCCGGCTAGAGAGGGAGATTGCGGAGAAGGCTGCTGATTTTTCCAGGGAGAGAGATGCCCATCAGAGGCTTTTGCAGCTGGTTGAGTTGAAGGACAAGAATTTGCTTCTCGAGCAGAATAAACGGAGGGATGCGGAGGAGATGGCACTGCAGCTGGGGAACTCTCTTGAGGATATGAAGGGGAACTTTGAGCGATTGATCGCGAGGCATGAGGTTGAGAAGGAGCGAATTCCGGGGAGGTTGGAGGAGGAAATGGGGAAAAAGGATGAGGTTATTGGGCGGCTAGAGAGCGAGATTGCGGAGAAGGCTGCTGATGTCTCTAGGGAAAGAGATGCCCATCAGAGGATGCTGCAGCAGGTTGAGTTGAAGGATAAGGATCTGCTTCTCGAGCAGAATAAGCGGAAGGACCTGATCGAGGATTACACTAAGCTGAAGACACTCTACAAGGATTTGAAGTCTCAGTACAACTTTCTTGTTGGAAAGATTGGCCAGAATGAAGGCTCCAAGTCTCCTGTAGTCAATGTGGTGGATCGGAAAACCTCCGGAAGCCCTCCAAGCAAGAGAAAGCTCAAAGATCTGGTGGACACTAAAAAGGAGAACAATCAGGCAGTATCTAAGACTGTAGATGAGAAAAATGGTCCTGCTTCAAGTGCAAAGGCACAAGGTACCCACCATGCTAGCTCAGTCAGGAGTCCATTCAGTAACTCGCGCCTTTGTCTACCGTCTCGTACAACCAATCCTCCACCAAAGAATGCTACTAGCAATTCAAAAACAGAGGCAGCATCTAGTTTCACCCGCCCAAGTCTACACTGGAGGGAGACTCGCGCGCGTAAAGAACCAGGCGTTGTAGATCCACATGATGATTTCCTTGACACACCTCTGGAGGCTGTCAAAAATATGATCAGGAATCCTAAAACGCCAGAAGAAGCACAAGCCCTTGCTGCCTCTCCTCCTAAAGATATGGACTTCAATAACTCTGATGATGAGACTCAAGATGTCAATATTGCCACCCAGGGCCAGAAAAACATGCCAGTTCCCAAGCAGCAAAGTACAATTTCAATCCAACCACCAAATAAAGGTTTCAAATACACAGAACCTGTAAGAAAAAAGGCTGACCGGGAGAATCTGAAAGGCGTTGAGTGCAAGCAGTGCAAGAAATTCTATGATGCTGTTCTTCCAGATGGCCGCACAAATGGTGACGGTGTGGACTCTACAAGCATGAGGTGTGAGCATCATGATGGCGTATCCAGACATCGCTACAGGTACGCGCCGCCGCTGACACCTGAAGGGTTTTGGAACATTGGGTTTGAATCAGAAATGTAG
Protein Sequence
- >LOC_Os06g41050.1
MNANVLGGDVVADDFNYFSGVSTIFVANIQEVKDRVSQIELLFCSQLFPHVQAMWKAAKDAWMEREAALLSQLEELSSGKRHAEEKALQLGCSLDEMKGKLADAERSVAGHEVEKKRLLGRLEEEIGNKDEVIRRLEREIAEKAADFSRERDAHQRLLQLVELKDKNLLLEQNKRRDAEEMALQLGNSLEDMKGNFERLIARHEVEKERIPGRLEEEMGKKDEVIGRLESEIAEKAADVSRERDAHQRMLQQVELKDKDLLLEQNKRKDLIEDYTKLKTLYKDLKSQYNFLVGKIGQNEGSKSPVVNVVDRKTSGSPPSKRKLKDLVDTKKENNQAVSKTVDEKNGPASSAKAQGTHHASSVRSPFSNSRLCLPSRTTNPPPKNATSNSKTEAASSFTRPSLHWRETRARKEPGVVDPHDDFLDTPLEAVKNMIRNPKTPEEAQALAASPPKDMDFNNSDDETQDVNIATQGQKNMPVPKQQSTISIQPPNKGFKYTEPVRKKADRENLKGVECKQCKKFYDAVLPDGRTNGDGVDSTSMRCEHHDGVSRHRYRYAPPLTPEGFWNIGFESEM*