Information report for OsSNF7
Gene Details
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Functional Descriptions
- The LRD6-6 protein co-localizes with the MVBs marker protein RabF1/ARA6 and interacts with ESCRT-III components OsSNF7 and OsVPS2.
Functional Keywords
Literature and News
Gene Resources
- UniProt: A3BDG1
- EMBL: AP004279, AP008212, CM000143
- AlphaFoldDB: A3BDG1
- EnsemblPlants: Os06t0608500-01
- Gramene: Os06t0608500-01
- KEGG: dosa:Os06g0608500, osa:4341494
- Orthologous matrix: RCPKEGL
- InterPro: IPR005024
- PANTHER: PTHR22761, PTHR22761:SF10
- Gene3D: 1.10.287.1060, 6.10.250.1710
- OrthoDB: A3BDG1
- SWISS-MODEL: A3BDG1
Sequences
cDNA Sequence
- >LOC_Os06g40620.2
GAACGAAACTTCCTTGTCATGCCGGTAACGACTCCCACCACCGCATCCTCCCCGCTTTTCCCACTCCCAACCACGACCGCGGCCGGCCGGCGAATCGCCTCGATTCCGGCGTGCGAATTCCTCCACCTCGCCGCCGCCGCTGCTCGCGACCGATCTTCACCTTCCGCTTCCCCCCCCCTGCAGCCGATTGGACTCGATCCTATCCTATCCTATCCTATCCCCGAACGGGCGATCTGGTAGGCGAGAGAGACCAGCCATGTCGGGGGTGTTCGGCAAGGTGTTCGGGAAGTCCAAGGCGCAGAGCCAGGCCACCGCGCTGGCCTCCATCGACAAGCTCAGCGAGACTCTTGAAATGCTGGAAAAGAAAGAAAATTTGCTAGTGAAGAAAGCGAATCTTGAGGTTGAGAAGGCCAAGACCTTCACTAAAGCGAAGAATAAAAGAGCTGCAATACAATGCTTAAAGAGGAAGAGATTATATGAGCAACAGATTGAGCAGCTTGGTAATTTCCAATTAAGGATACATGATCAGATGATAATGCTGGAAGGTGCAAAGGCTACAACAGAGACTGTTGATGCATTGAGAACTGGAGCATCGGCGATGAAAGCAATGCACAAAGCGACAAATATTGACGACGTTGACAAGACAATGGATGAAATTAATGACAATATGGAGAATATGAGGCAGATCCAGGATCTACTATCTGCTCCTATTGGAGCTGCAGCTGATTTTGATGAAGATGAGCTGGAAGCTGAATTAGCAGATCTGGAGGGGGAGGAATTGGAGGCAGAGCTTCTAGCACCTACAACGACTGCCCCTACTGCTCCAGTGCGTGTACAGCAACCAACTCGGCCTTCTGCCCAGAGCAGCAAAACTGAAGATGACGAGTTGGCAGCTTTGCAGGCAGAGATGGCTATGTAATTAGGCTTTGATAGGGTCATGCCAAAAGATCAGATACTTCAAATACTCCTATATTGGACTCTGGTGTACTCATGAAGATCTTCCTAGGAAGATGTCAGAGACACAGAAGCAAGCTGCATGCCAGCCTAACCCGTTATGTATGGTATCATGTCATGTTACTGCCTTGTAAATCAAACAGAGCTATTTGAGCACATTATGAGCTAATAAAATGTACTACCCGTGATGGCGTCATTATGATGTGTTTCAGTCTGTACCATATCGTTTTGACGTTTTTAGTGTAGGTCAATTTATAGTTTCTCTTGATTCGAATCTGAAGTACTACATTGATGGTCGAATATAGACAGTTCTCTAAATAATGTGAATGATGATTGTATAGGGTGCTGTACATTCCTTCAGTTGTTGGTACTGTCGACCTGTAATAAATTATTAACCTAGGCTTTGTAGCTGTCTAAACAGTGATGTATATTAGTCGTGATAATTGGACACATTT - >LOC_Os06g40620.1
GAACGAAACTTCCTTGTCATGCCGGTAACGACTCCCACCACCGCATCCTCCCCGCTTTTCCCACTCCCAACCACGACCGCGGCCGGCCGGCGAATCGCCTCGATTCCGGCGTGCGAATTCCTCCACCTCGCCGCCGCCGCTGCTCGCGACCGATCTTCACCTTCCGCTTCCCCCCCCCTGCAGCCGATTGGACTCGATCCTATCCTATCCTATCCTATCCCCGAACGGGCGATCTGGTAGGCGAGAGAGACCAGCCATGTCGGGGGTGTTCGGCAAGGTGTTCGGGAAGTCCAAGGCGCAGAGCCAGGCCACCGCGCTGGCCTCCATCGACAAGCTCAGCGAGACTCTTGAAATGCTGGAAAAGAAAGAAAATTTGCTAGTGAAGAAAGCGAATCTTGAGGTTGAGAAGGCCAAGACCTTCACTAAAGCGAAGAATAAAAGAGCTGCAATACAATGCTTAAAGAGGAAGAGATTATATGAGCAACAGATTGAGCAGCTTGGTAATTTCCAATTAAGGATACATGATCAGATGATAATGCTGGAAGGTGCAAAGGCTACAACAGAGACTGTTGATGCATTGAGAACTGGAGCATCGGCGATGAAAGCAATGCACAAAGCGACAAATATTGACGACGTTGACAAGACAATGGATGAAATTAATGACAATATGGAGAATATGAGGCAGATCCAGGATCTACTATCTGCTCCTATTGGAGCTGCAGCTGATTTTGATGAAGATGAGCTGGAAGCTGAATTAGCAGATCTGGAGGGGGAGGAATTGGAGGCAGAGCTTCTAGCACCTACAACGACTGCCCCTACTGCTCCAGTGCGTGTACAGCAACCAACTCGGCCTTCTGCCCAGAGCAGCAAAACTGAAGATGACGAGTTGGCAGCTTTGCAGGCAGAGATGGCTATGTAATTAGGCTTTGATAGGGTCATGCCAAAAGATCAGATACTTCAAATACTCCTATATTGGACTCTGGTGTACTCATGAAGATCTTCCTAGGAAGATGTCAGAGACACAGAAGCAAGCTGCATGCCAGCCTAACCCGTTATGTATGGTATCATGTCATGTTACTGCCTTGTAAATCAAACAGAGCTATTTGAGCACATTATGAGCTAATAAAATGTACTACCCGTGATGGCGTCATTATGATGTGTTTCAGTCTGTACCATATCGTTTTGACGTTTTTAGTGTAGGTCAATTTATAGTTTCTCTTGATTCGAATCTGAAGTACTACATTGATGGTCGAATATAGACAGTTCTCTAAATAATGTGAATGATGATTGTATAGGGTGCTGTACATTCCTTCAGTTGTTGGTACTGTCGACCTGTAATAAATTATTAACCTAGGCTTTGTAGCTGTCTAAACAGTGATGTATATTAGTCGTGATAATTGGACACATTT
CDS Sequence
- >LOC_Os06g40620.2
ATGTCGGGGGTGTTCGGCAAGGTGTTCGGGAAGTCCAAGGCGCAGAGCCAGGCCACCGCGCTGGCCTCCATCGACAAGCTCAGCGAGACTCTTGAAATGCTGGAAAAGAAAGAAAATTTGCTAGTGAAGAAAGCGAATCTTGAGGTTGAGAAGGCCAAGACCTTCACTAAAGCGAAGAATAAAAGAGCTGCAATACAATGCTTAAAGAGGAAGAGATTATATGAGCAACAGATTGAGCAGCTTGGTAATTTCCAATTAAGGATACATGATCAGATGATAATGCTGGAAGGTGCAAAGGCTACAACAGAGACTGTTGATGCATTGAGAACTGGAGCATCGGCGATGAAAGCAATGCACAAAGCGACAAATATTGACGACGTTGACAAGACAATGGATGAAATTAATGACAATATGGAGAATATGAGGCAGATCCAGGATCTACTATCTGCTCCTATTGGAGCTGCAGCTGATTTTGATGAAGATGAGCTGGAAGCTGAATTAGCAGATCTGGAGGGGGAGGAATTGGAGGCAGAGCTTCTAGCACCTACAACGACTGCCCCTACTGCTCCAGTGCGTGTACAGCAACCAACTCGGCCTTCTGCCCAGAGCAGCAAAACTGAAGATGACGAGTTGGCAGCTTTGCAGGCAGAGATGGCTATGTAA - >LOC_Os06g40620.1
ATGTCGGGGGTGTTCGGCAAGGTGTTCGGGAAGTCCAAGGCGCAGAGCCAGGCCACCGCGCTGGCCTCCATCGACAAGCTCAGCGAGACTCTTGAAATGCTGGAAAAGAAAGAAAATTTGCTAGTGAAGAAAGCGAATCTTGAGGTTGAGAAGGCCAAGACCTTCACTAAAGCGAAGAATAAAAGAGCTGCAATACAATGCTTAAAGAGGAAGAGATTATATGAGCAACAGATTGAGCAGCTTGGTAATTTCCAATTAAGGATACATGATCAGATGATAATGCTGGAAGGTGCAAAGGCTACAACAGAGACTGTTGATGCATTGAGAACTGGAGCATCGGCGATGAAAGCAATGCACAAAGCGACAAATATTGACGACGTTGACAAGACAATGGATGAAATTAATGACAATATGGAGAATATGAGGCAGATCCAGGATCTACTATCTGCTCCTATTGGAGCTGCAGCTGATTTTGATGAAGATGAGCTGGAAGCTGAATTAGCAGATCTGGAGGGGGAGGAATTGGAGGCAGAGCTTCTAGCACCTACAACGACTGCCCCTACTGCTCCAGTGCGTGTACAGCAACCAACTCGGCCTTCTGCCCAGAGCAGCAAAACTGAAGATGACGAGTTGGCAGCTTTGCAGGCAGAGATGGCTATGTAA
Protein Sequence
- >LOC_Os06g40620.2
MSGVFGKVFGKSKAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKATNIDDVDKTMDEINDNMENMRQIQDLLSAPIGAAADFDEDELEAELADLEGEELEAELLAPTTTAPTAPVRVQQPTRPSAQSSKTEDDELAALQAEMAM* - >LOC_Os06g40620.1
MSGVFGKVFGKSKAQSQATALASIDKLSETLEMLEKKENLLVKKANLEVEKAKTFTKAKNKRAAIQCLKRKRLYEQQIEQLGNFQLRIHDQMIMLEGAKATTETVDALRTGASAMKAMHKATNIDDVDKTMDEINDNMENMRQIQDLLSAPIGAAADFDEDELEAELADLEGEELEAELLAPTTTAPTAPVRVQQPTRPSAQSSKTEDDELAALQAEMAM*