Gene Details:
- MSU gene ID: LOC_Os06g39960
- RAPdb gene ID: Os06g0601500
- Gene Symbol: OsbZIP48
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Moreover, OsbZIP48 protein does not degrade in dark grown rice and Athy5 seedlings complemented with OsbZIP48, which is in striking contrast to AtHY5.
- The RNAi lines and T-DNA insertional mutant of OsbZIP48 showed seedling lethal phenotype despite the fact that roots were more proliferative during early stages of development.
- In comparison to AtHY5, which does not cause any change in hypocotyl length when over-expressed in Arabidopsis, the over-expression of full-length OsbZIP48 in rice transgenics reduced the plant height considerably.
- OsbZIP48 and OsbZIP50, but not OsbZIP49, complement the zinc deficiency-hypersensitive Arabidopsis bzip19bzip23 double mutant.
- Our results suggest that regulation of the zinc deficiency response in rice is conserved, with OsbZIP48 being a functional homolog of AtbZIP19 and AtbZIP23.
Function-related keywords:
- seedlings , seedling , development , height , plant-height , zinc
Literature:
- OsbZIP48, a HY5 Transcription Factor Ortholog, Exerts Pleiotropic Effects in Light-Regulated Development . DOI: 10.1104/pp.17.00478 ; PMID: 28775143
- Rice F-bZIP transcription factors regulate the zinc deficiency response . DOI: 10.1093/jxb/eraa115 ; PMID: 32133499
- Comparative transcriptome profile analysis of rice varieties with different tolerance to zinc deficiency . DOI: 10.1111/plb.13227 ; PMID: 33296551
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g39960.1
CAGAGAAACGTGCCCACAATTACTAGTTCCCTGCTATCTAGCTTGCTTGCTATCTCAGCTCCCAGACGATCGATCGAGCGATCGAGCTAGCTAGTGTCTGCATATAGACTGATAGCGAGTGGGATAAGCTGGACAGCGAGGGAAGAGAATGCAACGAGATCACCGGAGGAGCTCGCCGCCGGCGGCCGCCTCCAGCAGCGAGAGGTCGTCGGACTCCGCCCCAAACACCGACGACGGCAAGGAAGGGGTGGATAGCGACGACGAGGAGATAGTAGGGAGGGTGCCGGAGTTCGGGCTGGCGCTGCCGGGGACGTCGACGTCGGGCAGAGGTAGTGTTCGGGTTGCAGGTGACGCGGCGGCGACGGCGGCCGGGACGTCGTCGTCGTCGCCCGCGGCGCAGGCCGGCGTCGCCGGCAGCAGCAGCAGCGGGCGCCGCCGCGGACGCAGCCCCGCCGACAAGGAGCACCGGCGCCTCAAAAGATTGCTGAGGAACCGGGTGTCAGCGCAGCAGGCTCGGGAGAGGAAGAAGGCGTACATGAGTGAGCTGGAGGCGAGGGTGAAGGACCTGGAGAGGAGCAACTCAGAGCTGGAGGAGAGGCTCTCTACCCTGCAAAACGAGAACCAGATGCTTAGGCAGGTGCTGAAGAACACAACAGCAAACAGAAGAGGGCCAGACAGCAGTGCCGGCGGAGACAGCTAGTAACCGCAATCTGTAGTCTGGAATCTGGAGTTCGATTAATTTTGTTAGCTTGGCTAGCTCCATTTGGCAGAGTCACAACTAAGACTCAAAGGGAAGCTGCTCCCTTTTGATTGATTTGTAGTTTCTTAGATAAAATTAATTACTACATTAAATACAACCATTCTTGGCTATGCACCTGAATAAGTACTCGTTAGTGCTAGCCAGATCGAGACAAATGAACTTACCTATTTATGCCTTCTCGAATCAACTCTGGAAGGCATATAATTGTTTCCATGTCTACCTCCTATTGGCGGATTGGCCGAGCCCTGCAAAAGTGTAATAAATGTATGTAATTCCGCCATTCCGGCCGTCAAATGGTGCGCACAAACGTCTACTGTTGAAGATGACAGTGTCAGTACGGTATATTGTTGAAGAACAGTAGCCGGTATTCAGTAGGAATGTGATTATGTGAGTGTAATGCATGATGGAAATGCAACTTCTTTCAGAGCTCGCATGATCGCATCGGATTTAATTTTCTATGTTTCCCTATATGATTTGTATTTACCTGTAAGAGATCGAAGATTAAGCACCGGATTGTTCCGCTTGTAAGTCGATCAGGTTTGTCCCTGCACAAACACCGGTAAGAAATAAG
CDS Sequence
- >LOC_Os06g39960.1
ATGCAACGAGATCACCGGAGGAGCTCGCCGCCGGCGGCCGCCTCCAGCAGCGAGAGGTCGTCGGACTCCGCCCCAAACACCGACGACGGCAAGGAAGGGGTGGATAGCGACGACGAGGAGATAGTAGGGAGGGTGCCGGAGTTCGGGCTGGCGCTGCCGGGGACGTCGACGTCGGGCAGAGGTAGTGTTCGGGTTGCAGGTGACGCGGCGGCGACGGCGGCCGGGACGTCGTCGTCGTCGCCCGCGGCGCAGGCCGGCGTCGCCGGCAGCAGCAGCAGCGGGCGCCGCCGCGGACGCAGCCCCGCCGACAAGGAGCACCGGCGCCTCAAAAGATTGCTGAGGAACCGGGTGTCAGCGCAGCAGGCTCGGGAGAGGAAGAAGGCGTACATGAGTGAGCTGGAGGCGAGGGTGAAGGACCTGGAGAGGAGCAACTCAGAGCTGGAGGAGAGGCTCTCTACCCTGCAAAACGAGAACCAGATGCTTAGGCAGGTGCTGAAGAACACAACAGCAAACAGAAGAGGGCCAGACAGCAGTGCCGGCGGAGACAGCTAG
Protein Sequence
- >LOC_Os06g39960.1
MQRDHRRSSPPAAASSSERSSDSAPNTDDGKEGVDSDDEEIVGRVPEFGLALPGTSTSGRGSVRVAGDAAATAAGTSSSSPAAQAGVAGSSSSGRRRGRSPADKEHRRLKRLLRNRVSAQQARERKKAYMSELEARVKDLERSNSELEERLSTLQNENQMLRQVLKNTTANRRGPDSSAGGDS*