Information report for OsIAA23
Gene Details
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Functional Descriptions
- Expression of OsIAA23 is specific to the QC of the root tip during the development of primary, lateral and crown roots.
- Consistent with OsIAA23 expression in the QC, the auxin signaling marked by DR5p::GUS (ss-glucuronidase) was absent in the QC region of OsIAA23.
- These results indicate that the maintenance of the QC is dependent on OsIAA23-mediated auxin signaling in the QC.
- OsIAA23-mediated auxin signaling defines postembryonic maintenance of QC in rice.
- The mutant is characterized by a loss of QC identity during postembryonic development, and the displayed defects result from a stabilizing mutation in domain II of OsIAA23 (Os06g39590).
- Transgenic rice plants harboring OsIAA23 under the control of the QHB promoter mimic partially the defects of OsIAA23.
- In rice, the gene OsIAA23 (Os06t0597000) is known to affect development of roots and shoots, but previous knockouts in OsIAA23 have been sterile and difficult for research continuously.
Functional Keywords
- crown-root , crown , auxin , root , iaa , development , sterile
Literature and News
Gene Resources
- UniProt: Q69VE0
- EMBL: AK069376, AP004236, AP008212
- AlphaFoldDB: Q69VE0
- EnsemblPlants: Os06t0597000-01
- Gramene: Os06t0597000-01
- KEGG: dosa:Os06g0597000
- InterPro: IPR003311, IPR033389, IPR053793
- PANTHER: PTHR31734, PTHR31734:SF92
- SUPFAM: SSF54277
- PROSITE: PS51745
- Gene3D: 3.10.20.90
- OrthoDB: Q69VE0
- SWISS-MODEL: Q69VE0
Sequences
cDNA Sequence
- >LOC_Os06g39590.2
ACCACCACACCCCTCGTCTCCGCAAACTCGACGCGCCACTCGACAGCGACCCCGCAGCCGATCCATCCCGCCGCCGAAGCAGCAGCAACCGCCACGGTGCGCCGCCGCCGCCGGTACCGATGTCGACGAGCTCCGGCGCCGACTCGTCCCCGCCCGTCTCGGGCCTCGACTACGACGACACCGCCCTCACCCTCGCCCTCCCCGGCTCCTCCTCCTCCTCCTCCTCCACCGCCGACCCCGAACGCAAGCGCGCCGCCCACGCCGACCACGCCGACGCCAAGCCGCCTTCCCCAAAGGCGCGGGCGGTGGGGTGGCCGCCGGTGAGGGCGTACAGGCGGAACGCGCTGCGGGAGGACTCCGCGAGGGCGAAGCTGGTCAAGGTGGCCGTGGACGGCGCGCCGTACCTGCGCAAGGTGGACCTCGCGGCGCACGCCGGCTACGCGCCCCTCCTCCGCGCGCTCCACGGCATGTTCGCCTCCTGCCTCGCCGTCCGCGGCGGCGGCGGCGGCGACGGCGAGGGTACAAAGCTCGTCGACTTGGTCACCGGCGCCGAGTACGTGCCCACCTACGAGGACAAGGACGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGTAAGCAACGCGTGTACACATCTCAATCAGTTCTTGCCGATTAATTCACCGAAATCAAATGCAAAATCTGATCCGATCAATCAACACAGGATGTTCGTCGAGTCCTGCAAGCGGATCCGTCTCATGAAGAGCTCCGAGGCCGTCAACTTATCGCCAAGACGATCATCCAGATAATCGATCCTACCACACGCAACGATGCAATGCCGCAATTGATCTGTCTGTCTGTCTGTCTGTCTGAATTAGTTCGTCTGAAAGTGTGTGCAATGGAAGAGGCTTGGCTGTACAGGTCCTCCATGCATATGTACCTATACCGTAGTAGGATCAGTGATCGATGAGCCAAATTGGTGTGTGTACTGTACAGGCCACAAGAACGAAAATATCCTCTCTCTTTAATTCAGGTGTGCTCCCTGCTGCCGGATCACGGCCGGCCCGGTTTGGTTTTTGGACGACGGCGGCGAGGATCGATCCAAGGGAGGCGCCGCCACGCCGCCGCGGCGGTGTACTTTAATTTTCAAGTTGTCAGCTACTTTCTGTAATTTGTTTCATGATGGTTCGGTTTCCTGTGACAGCCAGCACTTTTGTTGTATGTCAAATGCAATGTATACATGATATACCGGTTGTTATCGTTGTTGTTGCTGTTGTTGACTTTGTTCTGTCCATTGATGCATTGCAAGGTCAAATATAGGAGCACAATAATCTGTC - >LOC_Os06g39590.1
ACCACCACACCCCTCGTCTCCGCAAACTCGACGCGCCACTCGACAGCGACCCCGCAGCCGATCCATCCCGCCGCCGAAGCAGCAGCAACCGCCACGGTGCGCCGCCGCCGCCGGTACCGATGTCGACGAGCTCCGGCGCCGACTCGTCCCCGCCCGTCTCGGGCCTCGACTACGACGACACCGCCCTCACCCTCGCCCTCCCCGGCTCCTCCTCCTCCTCCTCCTCCACCGCCGACCCCGAACGCAAGCGCGCCGCCCACGCCGACCACGCCGACGCCAAGCCGCCTTCCCCAAAGGCGCGGGCGGTGGGGTGGCCGCCGGTGAGGGCGTACAGGCGGAACGCGCTGCGGGAGGACTCCGCGAGGGCGAAGCTGGTCAAGGTGGCCGTGGACGGCGCGCCGTACCTGCGCAAGGTGGACCTCGCGGCGCACGCCGGCTACGCGCCCCTCCTCCGCGCGCTCCACGGCATGTTCGCCTCCTGCCTCGCCGTCCGCGGCGGCGGCGGCGGCGACGGCGAGGGTACAAAGCTCGTCGACTTGGTCACCGGCGCCGAGTACGTGCCCACCTACGAGGACAAGGACGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGTAAGCAACGCGTGTACACATCTCAATCAGTTCTTGCCGATTAATTCACCGAAATCAAATGCAAAATCTGATCCGATCAATCAACACAGGATGTTCGTCGAGTCCTGCAAGCGGATCCGTCTCATGAAGAGCTCCGAGGCCGTCAACTTATCGCCAAGACGATCATCCAGATAATCGATCCTACCACACGCAACGATGCAATGCCGCAATTGATCTGTCTGTCTGTCTGTCTGTCTGAATTAGTTCGTCTGAAAGTGTGTGCAATGGAAGAGGCTTGGCTGTACAGGTCCTCCATGCATATGTACCTATACCGTAGTAGGATCAGTGATCGATGAGCCAAATTGGTGTGTGTACTGTACAGGCCACAAGAACGAAAATATCCTCTCTCTTTAATTCAGGTGTGCTCCCTGCTGCCGGATCACGGCCGGCCCGGTTTGGTTTTTGGACGACGGCGGCGAGGATCGATCCAAGGGAGGCGCCGCCACGCCGCCGCGGCGGTGTACTTTAATTTTCAAGTTGTCAGCTACTTTCTGTAATTTGTTTCATGATGGTTCGGTTTCCTGTGACAGCCAGCACTTTTGTTGTATGTCAAATGCAATGTATACATGATATACCGGTTGTTATCGTTGTTGTTGCTGTTGTTGACTTTGTTCTGTCCATTGATGCATTGCAAGGTCAAATATAGGAGCACAATAATCTGTC
CDS Sequence
- >LOC_Os06g39590.2
ATGTCGACGAGCTCCGGCGCCGACTCGTCCCCGCCCGTCTCGGGCCTCGACTACGACGACACCGCCCTCACCCTCGCCCTCCCCGGCTCCTCCTCCTCCTCCTCCTCCACCGCCGACCCCGAACGCAAGCGCGCCGCCCACGCCGACCACGCCGACGCCAAGCCGCCTTCCCCAAAGGCGCGGGCGGTGGGGTGGCCGCCGGTGAGGGCGTACAGGCGGAACGCGCTGCGGGAGGACTCCGCGAGGGCGAAGCTGGTCAAGGTGGCCGTGGACGGCGCGCCGTACCTGCGCAAGGTGGACCTCGCGGCGCACGCCGGCTACGCGCCCCTCCTCCGCGCGCTCCACGGCATGTTCGCCTCCTGCCTCGCCGTCCGCGGCGGCGGCGGCGGCGACGGCGAGGGTACAAAGCTCGTCGACTTGGTCACCGGCGCCGAGTACGTGCCCACCTACGAGGACAAGGACGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGTAA - >LOC_Os06g39590.1
ATGTCGACGAGCTCCGGCGCCGACTCGTCCCCGCCCGTCTCGGGCCTCGACTACGACGACACCGCCCTCACCCTCGCCCTCCCCGGCTCCTCCTCCTCCTCCTCCTCCACCGCCGACCCCGAACGCAAGCGCGCCGCCCACGCCGACCACGCCGACGCCAAGCCGCCTTCCCCAAAGGCGCGGGCGGTGGGGTGGCCGCCGGTGAGGGCGTACAGGCGGAACGCGCTGCGGGAGGACTCCGCGAGGGCGAAGCTGGTCAAGGTGGCCGTGGACGGCGCGCCGTACCTGCGCAAGGTGGACCTCGCGGCGCACGCCGGCTACGCGCCCCTCCTCCGCGCGCTCCACGGCATGTTCGCCTCCTGCCTCGCCGTCCGCGGCGGCGGCGGCGGCGACGGCGAGGGTACAAAGCTCGTCGACTTGGTCACCGGCGCCGAGTACGTGCCCACCTACGAGGACAAGGACGGCGACTGGATGCTCGTCGGCGACGTCCCCTGGAAGTAA
Protein Sequence
- >LOC_Os06g39590.2
MSTSSGADSSPPVSGLDYDDTALTLALPGSSSSSSSTADPERKRAAHADHADAKPPSPKARAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWK* - >LOC_Os06g39590.1
MSTSSGADSSPPVSGLDYDDTALTLALPGSSSSSSSTADPERKRAAHADHADAKPPSPKARAVGWPPVRAYRRNALREDSARAKLVKVAVDGAPYLRKVDLAAHAGYAPLLRALHGMFASCLAVRGGGGGDGEGTKLVDLVTGAEYVPTYEDKDGDWMLVGDVPWK*