Gene Details:

Functional Descriptions:

  • NA.
  • The expression of SDG711 and SDG718 is induced by LD and SD, respectively.
  • OsFIE1 specifically expressed in endosperm, and mRNA of OsFIE1 also enriched in inner seed coat with the corresponding PcG members of OsiEZ1 and OsCLF.
  • Reduced cell expansion and cell division of stem caused significant reduction of stem length during mature period of OsEMF2b, OsFIE2 and OsCLF RNAi transgenic plants.
  • To determine how PcG genes regulate plant height, we investigated the phenotypes of the emf2b mutant and OsEMF2b, OsFIE2 and OsCLF RNAi transgenic plants; they all exhibited dwarf phenotype.
  • Therefore, we speculated that these PcG genes, OsFIE2, OsCLF and OsEMF2b, may work as a PRC2 to regulate rice height.
  • SDG711 Is Involved in Rice Seed Development through Regulation of Starch Metabolism Gene Expression in Coordination with Other HistoneModifications.
  • SDG711 is a histone H3K27me2/3 transmethylase in rice, a homolog of CLF in Arabidopsis, and plays key roles in regulating flowering time and panicle development.
  • In this work, we investigated the role of SDG711 in rice seed development.
  • Overexpression and downregulation of SDG711 lead to a decrease and increase in the expression level of genes related to starch accumulation, resulting in smaller seeds or even seed abortion.
  • ChIP assay showed that SDG711-mediated H3K27me3 changed significantly in genes related to endosperm development, and SDG711 can directly bind to the gene body region of several starch synthesis genes and amylase genes.

Literature:

Gene Resources:

Sequences:

cDNA Sequence
  • >LOC_Os06g16390.1
    CTTCCCTTTCCTCCACCCACGCCGCGACGACGAGTCGCCGCCGCGGCCTCGCCGGCGACCAGGTCTCCGGCGGCCCCGCCGCCCGCCGTGACGGGGCTCCGGCCTTCCGCCCTCCTCCCCGCACCGCCCGCTATCTCGGCTCCCCGACTCCTGCATTCCCCCGACTCTCCCCCGGCCGCCGCCGCCGCCATTTCTGACTCTTTCTCCGCGGCGCGTCTCTCCTCCGAGAGCACGCCGACCGCCTCCCGAAGCGGCGTCGCGGCCGCGGCGGCCGCCGCCTTCTCCCGCCCCTGATGGCTGGCGATTCCCGAAATGAGCCGATGTTTTGCGAGGAAGGGAGCAGTGAATCGGGCTATGTTCTATGTGTTATTGATTCGCTGAAGAAGAAAATCACATCGGACCGCTTTGTTTACATCCAGAAAAGGGTAGAGGAGAATAGCATTAAGCTTAGCCCGATTACACTGCACTCTCACAATTTGTCAAAAAATAGGCAAACTAGTACATCCAACAGTACAGATTTAGTCTCGAATTTGCTCACAAAGAGGAAAGAAGATGCCCTGTGTGCTGTGAATAGTCGTGAGTCATCTCCTGATGAAAGTGAAGGTGCCAATTGCCAAGATGAGTGTTCATCGACTGTTATTGTGGGTGGAAATCTATCCGCGAGGAATTCTGTCCGTCCGATTAGACTACCAGAAGTGGCAACACTCCCTCCATATACAACTTGGATATTTTTGGACAGGAACCAGCGGATGCAAGAAGACCAATCTGTACTTGGTCGTCGAAGGATTTACTATGATACAAACTGTGGCGAAGCTTTAATTTGCAGTGATAGTGAAGATGAAGCTGTTGAGGACGAGGAAGAGAAAAAGGAGTTCAAGGATTCTGAAGATTGCATAATTCGGATGACCATTCAAGAATGTGGCATGTCTGATGCTGTGCTTGAAACTCTAGCTCGAGATATCGAAAGGGCTCCTGATGATATAAAGGCCAGGTATGAGATCCTACAAGGGGAGAAACCTGAGGGTTCTTCCAAGAAAGTGTCTGAACTTAATGTCAAAATGGAAGACGTGTACGGTGATAAAGATCTGGATGCAGCATTGGATTCCTTTGACAATCTCTTTTGTCGCCGATGTTTGGTTTTTGATTGCAAGCTACATGGGTGTTCTCAAGATTTAGTATTTCCGACTGAAAAGCAGGCACCATTGTGCAGCTCGGATGAGGGTACACCATGTGGTATTCACTGTTACAAACTGGTCTCTAAACCAGATGCTATCATGGAGATTGATTCTCATTTGCTTGTTGATGTTGAGGAGCCAACATCGGACAATCTAAAGGATCAGATAGGGTCAAATAAGAAAAAGCTTGGTTCTAGTGGGCAGAAAACAAAATCTCAACAAAGTGAAAGTTCTTCAACTGCAAGGGTTTCCTCAGAAAGCAGTGAGTCTGAAGTACAACTGTTAAGCAATAAATCCCCGCAACACTCTCCTGGCCTCTCAAAAAATAAGCTTGGCGCAAAAGGTGGAATCAAGAAAAGTACTAACAGAAGAATTGCTGAGAGAATTCTAATGAGTGTGAAAAAGGGGCAACAGGAAATGTCACCGGACTCTAATTCTATTGTTAATGGATGCCATTGGCCTAGGGATATGAAGCTTAGATCTGATACTAGGAGTGGAATTAAGGATTCTGTTGTATCCTCACAGTGTAATTCTCCAAGCACAAGGAGTTTTAGAAAGAAGGGCACACTTCAAATGGAGAATAACTCATCTTTTGTGGATGCTCAGAGTGATTCAATGGAGGATACAAATAATGAACATTCAGCAACAGATGGTTGTGATAGTTCAAGGAAAGAGGAATGTGTTGATGAGAGTATATGCAGGCAAGAAGCTCATGGCAGGTCCTGGAAAGTGATTGAGCAAGGGCTTCTATTGAAAGGATTAGAGATTTTTGGAAAGAACAGTTGTTTAATTGCTCGGAACCTTCTGGGTGGGATGAAAACATGCACAGATGTTTTTCAGTATATGAATTACATTGAAAACAGCAGTGCATCTGGAGCTCTTAGTGGTGTTGATTCTCTTGTTAAAGGATATATGAAGGGTAATGAATTACGGACAAGATCAAGATTTGTGAGAAGGCGAGGAAGGGTCCGCCGTTTGAAGTACACCTGGAAAACTGCAGGCTACCATTTTATAAGGAAAAGGATTACAGAAAGGAAGGATCAGCCTTGTCGACAATACACTCCTTGTGGTTGCCAGTCTGCATGTGGGAAGCAATGTCCATGTCTCACAAATGGTACCTGCTGTGAGAAATACTGTGGGTGCCCGAAAATGTGCAAGAATCGCTTCCGAGGTTGCCATTGCGCAAAGAGTCAGTGTCGCAGCCGGCAGTGTCCATGCTTTGCTGCTGACAGGGAATGTGATCCTGATGTGTGTAGAAACTGCTGGGTAGGGTGCGGTGATGGTACATTGGGAGTCCCTAACCAAAGAGGTGATAATTATGAATGCCGGAACATGAAACTGCTGCTTAAACAGCAACAAAGGGTCTTACTTGGGAGATCTGATGTTTCTGGCTGGGGAGCTTTCCTCAAGAATAGTGTTGGGAAGCACGAGTATCTTGGCGAGTACACTGGGGAGCTTATCTCCCATAAAGAAGCTGACAAGCGTGGAAAGATATATGACCGTGAGAATTCATCGTTCCTTTTCAACTTGAACAATGAGTACGTTCTTGATGCCTACAGAATGGGCGACAAGCTGAAGTTCGCCAACCATTCCCCTGATCCAAACTGCTACGCCAAGGTCATCATGGTAGCAGGCGATCACAGGGTGGGGATCTTCGCCAAAGAGCGGATCAGCGCGGGCGAGGAGCTGTTCTACGACTACCGCTACGAGCCCGACCGGGCCCCGGCGTGGGCTCGCAAGCCCGAGGGGCCCGGTGCCAAGGACGACGCCCAGCCTTCCACCGGGAGAGCAAAGAAGCTCGCCCACTGAAGAAGAAGAAGAAGAAGAAGATCAGCCGTTGATTCTTTTGTTGTCTTGGTTGATTCTTTCGTTATTGGTGAGGGGGACCGAGAACTCTGACGGTGATTAGCGCCGTAAGGAAAACTTTCCTGCCATTCGTTGGCCCCCTCGATTCGATTCGTTGATTTTCCCTGAATTCTGTAACTGCTGCACCTGTCGCCAGTTCAACTTCAAAAGATTTTTCTGATTCTGGATCAGTTGTTGTGTTCTTATGTGTTACTTTTCGAAAATACAATCACCATCTAAAATGCATGCATGACAC
CDS Sequence
  • >LOC_Os06g16390.1
    ATGGCTGGCGATTCCCGAAATGAGCCGATGTTTTGCGAGGAAGGGAGCAGTGAATCGGGCTATGTTCTATGTGTTATTGATTCGCTGAAGAAGAAAATCACATCGGACCGCTTTGTTTACATCCAGAAAAGGGTAGAGGAGAATAGCATTAAGCTTAGCCCGATTACACTGCACTCTCACAATTTGTCAAAAAATAGGCAAACTAGTACATCCAACAGTACAGATTTAGTCTCGAATTTGCTCACAAAGAGGAAAGAAGATGCCCTGTGTGCTGTGAATAGTCGTGAGTCATCTCCTGATGAAAGTGAAGGTGCCAATTGCCAAGATGAGTGTTCATCGACTGTTATTGTGGGTGGAAATCTATCCGCGAGGAATTCTGTCCGTCCGATTAGACTACCAGAAGTGGCAACACTCCCTCCATATACAACTTGGATATTTTTGGACAGGAACCAGCGGATGCAAGAAGACCAATCTGTACTTGGTCGTCGAAGGATTTACTATGATACAAACTGTGGCGAAGCTTTAATTTGCAGTGATAGTGAAGATGAAGCTGTTGAGGACGAGGAAGAGAAAAAGGAGTTCAAGGATTCTGAAGATTGCATAATTCGGATGACCATTCAAGAATGTGGCATGTCTGATGCTGTGCTTGAAACTCTAGCTCGAGATATCGAAAGGGCTCCTGATGATATAAAGGCCAGGTATGAGATCCTACAAGGGGAGAAACCTGAGGGTTCTTCCAAGAAAGTGTCTGAACTTAATGTCAAAATGGAAGACGTGTACGGTGATAAAGATCTGGATGCAGCATTGGATTCCTTTGACAATCTCTTTTGTCGCCGATGTTTGGTTTTTGATTGCAAGCTACATGGGTGTTCTCAAGATTTAGTATTTCCGACTGAAAAGCAGGCACCATTGTGCAGCTCGGATGAGGGTACACCATGTGGTATTCACTGTTACAAACTGGTCTCTAAACCAGATGCTATCATGGAGATTGATTCTCATTTGCTTGTTGATGTTGAGGAGCCAACATCGGACAATCTAAAGGATCAGATAGGGTCAAATAAGAAAAAGCTTGGTTCTAGTGGGCAGAAAACAAAATCTCAACAAAGTGAAAGTTCTTCAACTGCAAGGGTTTCCTCAGAAAGCAGTGAGTCTGAAGTACAACTGTTAAGCAATAAATCCCCGCAACACTCTCCTGGCCTCTCAAAAAATAAGCTTGGCGCAAAAGGTGGAATCAAGAAAAGTACTAACAGAAGAATTGCTGAGAGAATTCTAATGAGTGTGAAAAAGGGGCAACAGGAAATGTCACCGGACTCTAATTCTATTGTTAATGGATGCCATTGGCCTAGGGATATGAAGCTTAGATCTGATACTAGGAGTGGAATTAAGGATTCTGTTGTATCCTCACAGTGTAATTCTCCAAGCACAAGGAGTTTTAGAAAGAAGGGCACACTTCAAATGGAGAATAACTCATCTTTTGTGGATGCTCAGAGTGATTCAATGGAGGATACAAATAATGAACATTCAGCAACAGATGGTTGTGATAGTTCAAGGAAAGAGGAATGTGTTGATGAGAGTATATGCAGGCAAGAAGCTCATGGCAGGTCCTGGAAAGTGATTGAGCAAGGGCTTCTATTGAAAGGATTAGAGATTTTTGGAAAGAACAGTTGTTTAATTGCTCGGAACCTTCTGGGTGGGATGAAAACATGCACAGATGTTTTTCAGTATATGAATTACATTGAAAACAGCAGTGCATCTGGAGCTCTTAGTGGTGTTGATTCTCTTGTTAAAGGATATATGAAGGGTAATGAATTACGGACAAGATCAAGATTTGTGAGAAGGCGAGGAAGGGTCCGCCGTTTGAAGTACACCTGGAAAACTGCAGGCTACCATTTTATAAGGAAAAGGATTACAGAAAGGAAGGATCAGCCTTGTCGACAATACACTCCTTGTGGTTGCCAGTCTGCATGTGGGAAGCAATGTCCATGTCTCACAAATGGTACCTGCTGTGAGAAATACTGTGGGTGCCCGAAAATGTGCAAGAATCGCTTCCGAGGTTGCCATTGCGCAAAGAGTCAGTGTCGCAGCCGGCAGTGTCCATGCTTTGCTGCTGACAGGGAATGTGATCCTGATGTGTGTAGAAACTGCTGGGTAGGGTGCGGTGATGGTACATTGGGAGTCCCTAACCAAAGAGGTGATAATTATGAATGCCGGAACATGAAACTGCTGCTTAAACAGCAACAAAGGGTCTTACTTGGGAGATCTGATGTTTCTGGCTGGGGAGCTTTCCTCAAGAATAGTGTTGGGAAGCACGAGTATCTTGGCGAGTACACTGGGGAGCTTATCTCCCATAAAGAAGCTGACAAGCGTGGAAAGATATATGACCGTGAGAATTCATCGTTCCTTTTCAACTTGAACAATGAGTACGTTCTTGATGCCTACAGAATGGGCGACAAGCTGAAGTTCGCCAACCATTCCCCTGATCCAAACTGCTACGCCAAGGTCATCATGGTAGCAGGCGATCACAGGGTGGGGATCTTCGCCAAAGAGCGGATCAGCGCGGGCGAGGAGCTGTTCTACGACTACCGCTACGAGCCCGACCGGGCCCCGGCGTGGGCTCGCAAGCCCGAGGGGCCCGGTGCCAAGGACGACGCCCAGCCTTCCACCGGGAGAGCAAAGAAGCTCGCCCACTGA
Protein Sequence
  • >LOC_Os06g16390.1
    MAGDSRNEPMFCEEGSSESGYVLCVIDSLKKKITSDRFVYIQKRVEENSIKLSPITLHSHNLSKNRQTSTSNSTDLVSNLLTKRKEDALCAVNSRESSPDESEGANCQDECSSTVIVGGNLSARNSVRPIRLPEVATLPPYTTWIFLDRNQRMQEDQSVLGRRRIYYDTNCGEALICSDSEDEAVEDEEEKKEFKDSEDCIIRMTIQECGMSDAVLETLARDIERAPDDIKARYEILQGEKPEGSSKKVSELNVKMEDVYGDKDLDAALDSFDNLFCRRCLVFDCKLHGCSQDLVFPTEKQAPLCSSDEGTPCGIHCYKLVSKPDAIMEIDSHLLVDVEEPTSDNLKDQIGSNKKKLGSSGQKTKSQQSESSSTARVSSESSESEVQLLSNKSPQHSPGLSKNKLGAKGGIKKSTNRRIAERILMSVKKGQQEMSPDSNSIVNGCHWPRDMKLRSDTRSGIKDSVVSSQCNSPSTRSFRKKGTLQMENNSSFVDAQSDSMEDTNNEHSATDGCDSSRKEECVDESICRQEAHGRSWKVIEQGLLLKGLEIFGKNSCLIARNLLGGMKTCTDVFQYMNYIENSSASGALSGVDSLVKGYMKGNELRTRSRFVRRRGRVRRLKYTWKTAGYHFIRKRITERKDQPCRQYTPCGCQSACGKQCPCLTNGTCCEKYCGCPKMCKNRFRGCHCAKSQCRSRQCPCFAADRECDPDVCRNCWVGCGDGTLGVPNQRGDNYECRNMKLLLKQQQRVLLGRSDVSGWGAFLKNSVGKHEYLGEYTGELISHKEADKRGKIYDRENSSFLFNLNNEYVLDAYRMGDKLKFANHSPDPNCYAKVIMVAGDHRVGIFAKERISAGEELFYDYRYEPDRAPAWARKPEGPGAKDDAQPSTGRAKKLAH*