Information report for YPD1
Gene Details
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Functional Descriptions
- YPD1 was preferentially expressed in the leaf and encodes an LRR-Like1 (LRRL1) protein.
- These findings revealed that the novel rice LRRL1 protein YPD1 affects rice chloroplast development and leaf senescence.
- YPD1 localized on the chloroplast membrane.
- The YPD1 mutants exhibited a yellow and dwarf phenotype from germination, and premature senescence starting at tillering.
- Moreover, the YPD1 mutants were sensitive to high light, which accelerated cell death and senescence.
- Trypan blue staining, TUNEL experiments, NBT staining, and DAB staining demonstrated that the YPD1 mutants showed cell death and accumulated reactive oxygen species.
Functional Keywords
Literature and News
Sequences
cDNA Sequence
- >LOC_Os06g13050.1
ATGGACACTCACCTCGTCGTCGTCCTGGCATTGCTCGCCGCCGCCGCCGCGGCGGAGGCCAAGATGTCGGCGGACTACTACAGCAAGACGTGCCCGCGCGCGGACCGGATCATCGCCGACGTGCTGGCGCAGAAGCAGATCTCCAACCCTACGACGGCGGCGGGCGTCCTCCGCCTCTTCTTCCACGACTGCTTCGTCGGCGGCTGCGACGCGTCCGTGCTGGTCGCGTCCACCGCCGCGGCGCGCTCCGAGCGCGACGCCGACGTGAACCTGTCGCTCCCGGGTGACGCCTTCGACGCCCTGGCGCGCGCCAAGGCGGCGCTGGAGGTGGAGTGCCCGGGCGTCGTCTCCTGCGCCGACCTCCTCGCCGTCGCGGCGCGCGACCTCGTCACCATGACGGGGGGGCCCTACTACCCGCTCCGCCTCGGCCGCAAGGACGGGCTCTCCTCCTCGCCGTCGGCGCCCGACGCCGAGATCCCGCACGCCAACCTCACCGTCTCCCGCCTCGTCGCCGTGTTCGCCGCCAAGGGCTTCACCGTCCAGGACCTCGTCGCGCTCTCCGGCGCACACACCCTCGGCTTCTCCCATTGCAAGGAGTTCGCCGCCCGCATCTACGGCGGCGGCGGTGGCGGCGCCGACCCGACCATGAACCCGGCGCTCGCGAAGCGGCTGCAGGAGGCGTGCAGGGACTACCGGAGGGGCCCGACCATCGCGGCGTTCAACGACGTGATGACGCCGGGGAGGTTCGACAACATGTACTTCGTCAACCTCCGGCGAGGCCTCGGCCTCCTCGCCACCGACCAGGAGCTCTACGGCGACGCGCGGACGCGGCCGCACGTGGAGCGGTACGCCGCCAACGAGACGGCGTTCTTCGCCGACTTCGCGCGCGCCGCCCGGAGGCTCAGCCACCACGGCGTCAAGAACGGCGCCAACGGCGAGATTGGGGGCGGCGTGAACTTGCCTGATCTGTGGGTGATGTGGCTAGGCTTGGCAGCTAGAGGGACAACGCGATGGTCTGGTGACGATGTTGTGCAGAGGACAGTCATATGGAGGGTGGTTCAGAATTTGCTTCCCGGGAAGACAAAGGACCAGAGTTCTGGAGAATCTACCCCTTCTGGGATCATGTGGTCCTTTGCCGCTGGTTCCAATTTGTCAACATCTGCAAGCTTTAATGCTGAAAAGGAATCAAGGAAGAATTTAAATAAGTTCTATAAGGAAATCAGGACTCTGAAAAATGTTAACATGGCAGGTCGTCAATTTGGGGATGAGGGTCTGTTTTTTCTAGCAGAAAGCTTAGCCTATAACAAGAGTGCAGAAGAGGTAGACTTTTCTGGCAATGGGATAACAGCTGTGGGGATAGAAGCCTTTGATGGCATTCTTCAGATAAATACAGCCTTAAAATCTCTCAACTTATCTGGAAATGCCATTGGAGACGAAGGAGCTAAGTGTCTTTCAGATATATTGGTAGAGAATGTAGGTATCCAGAAGCTCCTATTGAACAGTACAAATATTGGAGACGAGGGGGCAAAAGCAATTTCGGATATGTTGAAAAAGAACAAGACGATACGTACTTTACAACTCAGCAACAACACAATAGAATACAGCGGTTTTGCAAGTATTGCAGAAGCACTCCTTGAGAATAATGTGCTACGGAGCTTATTTGTCAATGGCAACTATGGTGGTCCTCTTGGTGCATCCAGCCTAGCAAAAGGAATTCTAGGGAACAAAACTTTGAGGGAACTTCATTTGCATGGCAATGGTTTTGGGAATGAGGGAGTACGTGCATTGATGTCAGCGTTGTCTGCTCACAAAGGGAAGATCACTGTTTTGGATATTGGTAACAACAACATTACCTCTGAAGGTTCTCTTCATGTTGCTGAGTTCATCAAAAGGACAAAGTCTTTACTATGGCTCAGTCTATACATGAACGATATAAGTGATGAGGGAGCTGAAAAGGTTGCAGATGCTCTGAAACAGAATAAAACAATTTCTACTGTAGACTTGGGTGGTAATAACATTCACTCTAAAGGGGTAAGTGCAATAGCTGAAACTCTGAAGGATAATTCAGTGGTGACAACATTGGAGTTGAGCTATAATCCGATTGGGCCAGAGGGGGTAAAGGCTCTTTGTGATGTTCTCAAGTTCAATGGGAAAATCCAAACCCTTAAACTTGGTTGGTGCCAGATAGGTGTATCAGGTGCAGAATTTGTTGCTGATTGTTTGAAGTACAACACAACATTATCTACATTGGATTTGAGGGCAAATGGACTTGGAGATGATGGTGCTATCTGCTTGGCTCGAAGTTTCAAGATCATCAATGAATCTTTGACTTCACTTGACCTGGGCTTTAATGAGATTAGAGATGATGGAGCATTTGCATTGGCACAAGCACTTAAAGCTAATGAAGATCTTGCAGTCACATCATTAAATCTTGCAAACAACTTCTTCACTAAATTTGGACAGGTTGCTCTGTCTGAGGCACGGGATCATGTATATGAGATGAGCGAAAAGGAAATAGACATTTTCTTTTAG
CDS Sequence
- >LOC_Os06g13050.1
ATGGACACTCACCTCGTCGTCGTCCTGGCATTGCTCGCCGCCGCCGCCGCGGCGGAGGCCAAGATGTCGGCGGACTACTACAGCAAGACGTGCCCGCGCGCGGACCGGATCATCGCCGACGTGCTGGCGCAGAAGCAGATCTCCAACCCTACGACGGCGGCGGGCGTCCTCCGCCTCTTCTTCCACGACTGCTTCGTCGGCGGCTGCGACGCGTCCGTGCTGGTCGCGTCCACCGCCGCGGCGCGCTCCGAGCGCGACGCCGACGTGAACCTGTCGCTCCCGGGTGACGCCTTCGACGCCCTGGCGCGCGCCAAGGCGGCGCTGGAGGTGGAGTGCCCGGGCGTCGTCTCCTGCGCCGACCTCCTCGCCGTCGCGGCGCGCGACCTCGTCACCATGACGGGGGGGCCCTACTACCCGCTCCGCCTCGGCCGCAAGGACGGGCTCTCCTCCTCGCCGTCGGCGCCCGACGCCGAGATCCCGCACGCCAACCTCACCGTCTCCCGCCTCGTCGCCGTGTTCGCCGCCAAGGGCTTCACCGTCCAGGACCTCGTCGCGCTCTCCGGCGCACACACCCTCGGCTTCTCCCATTGCAAGGAGTTCGCCGCCCGCATCTACGGCGGCGGCGGTGGCGGCGCCGACCCGACCATGAACCCGGCGCTCGCGAAGCGGCTGCAGGAGGCGTGCAGGGACTACCGGAGGGGCCCGACCATCGCGGCGTTCAACGACGTGATGACGCCGGGGAGGTTCGACAACATGTACTTCGTCAACCTCCGGCGAGGCCTCGGCCTCCTCGCCACCGACCAGGAGCTCTACGGCGACGCGCGGACGCGGCCGCACGTGGAGCGGTACGCCGCCAACGAGACGGCGTTCTTCGCCGACTTCGCGCGCGCCGCCCGGAGGCTCAGCCACCACGGCGTCAAGAACGGCGCCAACGGCGAGATTGGGGGCGGCGTGAACTTGCCTGATCTGTGGGTGATGTGGCTAGGCTTGGCAGCTAGAGGGACAACGCGATGGTCTGGTGACGATGTTGTGCAGAGGACAGTCATATGGAGGGTGGTTCAGAATTTGCTTCCCGGGAAGACAAAGGACCAGAGTTCTGGAGAATCTACCCCTTCTGGGATCATGTGGTCCTTTGCCGCTGGTTCCAATTTGTCAACATCTGCAAGCTTTAATGCTGAAAAGGAATCAAGGAAGAATTTAAATAAGTTCTATAAGGAAATCAGGACTCTGAAAAATGTTAACATGGCAGGTCGTCAATTTGGGGATGAGGGTCTGTTTTTTCTAGCAGAAAGCTTAGCCTATAACAAGAGTGCAGAAGAGGTAGACTTTTCTGGCAATGGGATAACAGCTGTGGGGATAGAAGCCTTTGATGGCATTCTTCAGATAAATACAGCCTTAAAATCTCTCAACTTATCTGGAAATGCCATTGGAGACGAAGGAGCTAAGTGTCTTTCAGATATATTGGTAGAGAATGTAGGTATCCAGAAGCTCCTATTGAACAGTACAAATATTGGAGACGAGGGGGCAAAAGCAATTTCGGATATGTTGAAAAAGAACAAGACGATACGTACTTTACAACTCAGCAACAACACAATAGAATACAGCGGTTTTGCAAGTATTGCAGAAGCACTCCTTGAGAATAATGTGCTACGGAGCTTATTTGTCAATGGCAACTATGGTGGTCCTCTTGGTGCATCCAGCCTAGCAAAAGGAATTCTAGGGAACAAAACTTTGAGGGAACTTCATTTGCATGGCAATGGTTTTGGGAATGAGGGAGTACGTGCATTGATGTCAGCGTTGTCTGCTCACAAAGGGAAGATCACTGTTTTGGATATTGGTAACAACAACATTACCTCTGAAGGTTCTCTTCATGTTGCTGAGTTCATCAAAAGGACAAAGTCTTTACTATGGCTCAGTCTATACATGAACGATATAAGTGATGAGGGAGCTGAAAAGGTTGCAGATGCTCTGAAACAGAATAAAACAATTTCTACTGTAGACTTGGGTGGTAATAACATTCACTCTAAAGGGGTAAGTGCAATAGCTGAAACTCTGAAGGATAATTCAGTGGTGACAACATTGGAGTTGAGCTATAATCCGATTGGGCCAGAGGGGGTAAAGGCTCTTTGTGATGTTCTCAAGTTCAATGGGAAAATCCAAACCCTTAAACTTGGTTGGTGCCAGATAGGTGTATCAGGTGCAGAATTTGTTGCTGATTGTTTGAAGTACAACACAACATTATCTACATTGGATTTGAGGGCAAATGGACTTGGAGATGATGGTGCTATCTGCTTGGCTCGAAGTTTCAAGATCATCAATGAATCTTTGACTTCACTTGACCTGGGCTTTAATGAGATTAGAGATGATGGAGCATTTGCATTGGCACAAGCACTTAAAGCTAATGAAGATCTTGCAGTCACATCATTAAATCTTGCAAACAACTTCTTCACTAAATTTGGACAGGTTGCTCTGTCTGAGGCACGGGATCATGTATATGAGATGAGCGAAAAGGAAATAGACATTTTCTTTTAG
Protein Sequence
- >LOC_Os06g13050.1
MDTHLVVVLALLAAAAAAEAKMSADYYSKTCPRADRIIADVLAQKQISNPTTAAGVLRLFFHDCFVGGCDASVLVASTAAARSERDADVNLSLPGDAFDALARAKAALEVECPGVVSCADLLAVAARDLVTMTGGPYYPLRLGRKDGLSSSPSAPDAEIPHANLTVSRLVAVFAAKGFTVQDLVALSGAHTLGFSHCKEFAARIYGGGGGGADPTMNPALAKRLQEACRDYRRGPTIAAFNDVMTPGRFDNMYFVNLRRGLGLLATDQELYGDARTRPHVERYAANETAFFADFARAARRLSHHGVKNGANGEIGGGVNLPDLWVMWLGLAARGTTRWSGDDVVQRTVIWRVVQNLLPGKTKDQSSGESTPSGIMWSFAAGSNLSTSASFNAEKESRKNLNKFYKEIRTLKNVNMAGRQFGDEGLFFLAESLAYNKSAEEVDFSGNGITAVGIEAFDGILQINTALKSLNLSGNAIGDEGAKCLSDILVENVGIQKLLLNSTNIGDEGAKAISDMLKKNKTIRTLQLSNNTIEYSGFASIAEALLENNVLRSLFVNGNYGGPLGASSLAKGILGNKTLRELHLHGNGFGNEGVRALMSALSAHKGKITVLDIGNNNITSEGSLHVAEFIKRTKSLLWLSLYMNDISDEGAEKVADALKQNKTISTVDLGGNNIHSKGVSAIAETLKDNSVVTTLELSYNPIGPEGVKALCDVLKFNGKIQTLKLGWCQIGVSGAEFVADCLKYNTTLSTLDLRANGLGDDGAICLARSFKIINESLTSLDLGFNEIRDDGAFALAQALKANEDLAVTSLNLANNFFTKFGQVALSEARDHVYEMSEKEIDIFF*