Information report for LYP6;OsLYP6
Gene Details
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Functional Descriptions
- Here we further demonstrated the important roles of OsLYP4 and OsLYP6 in rice defense signaling, as silencing of either LYP impaired the defense marker gene activation induced by either bacterial pathogen Xanthomonas oryzaecola or fungal pathogen Magnaporthe oryzae.
- OsLYP4 and OsLYP6 play critical roles in rice defense signal transduction.
Functional Keywords
Literature and News
- Lysin motif-containing proteins LYP4 and LYP6 play dual roles in peptidoglycan and chitin perception in rice innate immunity . DOI: 10.1105/tpc.112.102475 ; PMID: 22872757
- OsLYP4 and OsLYP6 play critical roles in rice defense signal transduction . DOI: 10.4161/psb.22980 ; PMID: 23299421
- Identification and fine mapping of qGR6.2, a novel locus controlling rice seed germination under salt stress . DOI: 10.1186/s12870-020-02820-7 ; PMID: 33422012
Gene Resources
- UniProt: A0A678SDN3
- EMBL: MG460786
- AlphaFoldDB: A0A678SDN3
- EnsemblPlants: Os06t0208800-01
- Gramene: Os06t0208800-01
- KEGG: osa:4340448
- InterPro: IPR018392, IPR036393, IPR036779
- PANTHER: PTHR33734, PTHR33734:SF35
- SUPFAM: SSF53633, SSF54106
- PROSITE: PS51782
- Gene3D: 3.10.350.10
- OrthoDB: A0A678SDN3
- SWISS-MODEL: A0A678SDN3
- Conserved Domain Database: cd00118
Sequences
cDNA Sequence
- >LOC_Os06g10660.1
GCTTCACGGTGACTGAGACGCGCCGAACAGCTCACGCTTCTCCCGAAGCAAAGCCACAGCGGCCCAAACCCTAAACCCCCTCGAAGCTCCATCCAATGGCGGGGTGGCCGGCGGCGGAGGCCGCGGGGGCGCTGGTGGTGGCGATCCTCGCGGCGGCGGCGGGCGGCGCGGCGGGGAAGACGACGATCGAGCCGTGCGCGGGGGCGGACACGTGCGCCGCGCTGCTCGGGTACACGCTGTACGCGGACATGAAGGTGTCGGAGGTGGCGGCGCTGTTCGGCGCCGACCCGAGGGCCGTGCTCGCCGCGAACGCGCTCGACTTCGCCTCCCCCGGCGCCGCCAACCGCATCCTCCCCGCGGGGCTCCCGCTCCGCGTCCCCACCCGGTGCGCCTGCTCCGACGGCGTCCGCAAGTCCGTCGCCGTGCGCTACTCCGCGCGCCCCGCCGACACGCTGGCGTCCGTCGCCGACGTCGTCTTCGCCGGGCTCGCCTCCGCCGACCAGATCCGCACCGCCAACGGGCTCTCCGCCGAGGACCCCGACGCGCCGCTCGACGCCGGCGCCACGCTCGTCGTCCCGCTCCCCTGCGCCTGCTTCAACTCCACGGACAACAACCTCCCCGCCGTGTACCTCTCCTATGTCGTGCGGGTCGGGGACACCGTGCAGTCCATCGCCGCGACCCACGCCACCACCGTTACGGACATCAGCAATGTGAACGCCATGGGGAGCCCCATTGTCGCACCTGGTGACATCCTTGCAATCCCACTGCCAGCCTGTGCATCAATGTTTCCCAACTCTGCTTCGGACTATGGATTGCTTGTGGCAAATGGGACCTATGCACTAACTGCTGGAAACTGTGTGCAGTGCAGCTGTGGACCAGGAGATCTCAAATTGTATTGCACACCAGCTTCATTAACAGCATCATGTTCAAGTATGCAGTGCCCCAATAGCAACCTCATGCTTGGGAATGTGACTGCCCAATCCACCAGTGGTGGATGCAATGTCTCATCTTGCAGCTATGCTGGACTTGTTAATGGAACCATTGCCACGTCGCTCTCCTCTGGTCTTCAACCCACATGCCCAGGACCACATCAGTTCCCCCCACTCAGGGCGACACCAATTGCAGTAAACCAAGGATCATACCTTGCTCCATCACCTGCACCAGGAGCTGGGGAGGCTGGCGGCGATATTCCGGGCTTCCCTGGGAGCTCCAACGTTTCTCCTGCAAACGGCCCTTCTGGGAGTGTCTCCCAAGCGGCTTCGGTGAATCGGCCACACCAAATCGTCGCCCTCATTCTTTCTGTAGCCTTGTACTTCCAGATGTGAATTCGTGTGCAGAGTATTGTTGTTGTTGCTGGCTGTGTGTATTGAACAGGGGGCCCTCATTTGGGCCTGGTGGAACCCTAATGTCAAGGTCCTTTCTATCGCCGTCGTGGTGTCTCGCAGCGATCCAATTCTTAACTGCGTCAAACGGAAGCCCCAATTGGGGCGGGCTTATTCAGTTTGTAACCACATGGGCGTTCAAATTCAAAACCTATTGCTTGAGATAGTTAAATTTGTGGAAAGTAAAAAATAGAGTGAGTTCACTCTCAA
CDS Sequence
- >LOC_Os06g10660.1
ATGGCGGGGTGGCCGGCGGCGGAGGCCGCGGGGGCGCTGGTGGTGGCGATCCTCGCGGCGGCGGCGGGCGGCGCGGCGGGGAAGACGACGATCGAGCCGTGCGCGGGGGCGGACACGTGCGCCGCGCTGCTCGGGTACACGCTGTACGCGGACATGAAGGTGTCGGAGGTGGCGGCGCTGTTCGGCGCCGACCCGAGGGCCGTGCTCGCCGCGAACGCGCTCGACTTCGCCTCCCCCGGCGCCGCCAACCGCATCCTCCCCGCGGGGCTCCCGCTCCGCGTCCCCACCCGGTGCGCCTGCTCCGACGGCGTCCGCAAGTCCGTCGCCGTGCGCTACTCCGCGCGCCCCGCCGACACGCTGGCGTCCGTCGCCGACGTCGTCTTCGCCGGGCTCGCCTCCGCCGACCAGATCCGCACCGCCAACGGGCTCTCCGCCGAGGACCCCGACGCGCCGCTCGACGCCGGCGCCACGCTCGTCGTCCCGCTCCCCTGCGCCTGCTTCAACTCCACGGACAACAACCTCCCCGCCGTGTACCTCTCCTATGTCGTGCGGGTCGGGGACACCGTGCAGTCCATCGCCGCGACCCACGCCACCACCGTTACGGACATCAGCAATGTGAACGCCATGGGGAGCCCCATTGTCGCACCTGGTGACATCCTTGCAATCCCACTGCCAGCCTGTGCATCAATGTTTCCCAACTCTGCTTCGGACTATGGATTGCTTGTGGCAAATGGGACCTATGCACTAACTGCTGGAAACTGTGTGCAGTGCAGCTGTGGACCAGGAGATCTCAAATTGTATTGCACACCAGCTTCATTAACAGCATCATGTTCAAGTATGCAGTGCCCCAATAGCAACCTCATGCTTGGGAATGTGACTGCCCAATCCACCAGTGGTGGATGCAATGTCTCATCTTGCAGCTATGCTGGACTTGTTAATGGAACCATTGCCACGTCGCTCTCCTCTGGTCTTCAACCCACATGCCCAGGACCACATCAGTTCCCCCCACTCAGGGCGACACCAATTGCAGTAAACCAAGGATCATACCTTGCTCCATCACCTGCACCAGGAGCTGGGGAGGCTGGCGGCGATATTCCGGGCTTCCCTGGGAGCTCCAACGTTTCTCCTGCAAACGGCCCTTCTGGGAGTGTCTCCCAAGCGGCTTCGGTGAATCGGCCACACCAAATCGTCGCCCTCATTCTTTCTGTAGCCTTGTACTTCCAGATGTGA
Protein Sequence
- >LOC_Os06g10660.1
MAGWPAAEAAGALVVAILAAAAGGAAGKTTIEPCAGADTCAALLGYTLYADMKVSEVAALFGADPRAVLAANALDFASPGAANRILPAGLPLRVPTRCACSDGVRKSVAVRYSARPADTLASVADVVFAGLASADQIRTANGLSAEDPDAPLDAGATLVVPLPCACFNSTDNNLPAVYLSYVVRVGDTVQSIAATHATTVTDISNVNAMGSPIVAPGDILAIPLPACASMFPNSASDYGLLVANGTYALTAGNCVQCSCGPGDLKLYCTPASLTASCSSMQCPNSNLMLGNVTAQSTSGGCNVSSCSYAGLVNGTIATSLSSGLQPTCPGPHQFPPLRATPIAVNQGSYLAPSPAPGAGEAGGDIPGFPGSSNVSPANGPSGSVSQAASVNRPHQIVALILSVALYFQM*