Gene Details:
- MSU gene ID: LOC_Os06g06900
- RAPdb gene ID: Os06g0164400
- Gene Symbol: SD6
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- SD6 and another bHLH factor inducer of C-repeat binding factors expression 2 (ICE2) function antagonistically in controlling seed dormancy by directly regulating the ABA catabolism gene ABA8OX3, and indirectly regulating the ABA biosynthesis gene NCED2 via OsbHLH048, in a temperature-dependent manner.
- Notably, by genome editing SD6 and its wheat homologs, we demonstrated that SD6 is a useful breeding target for alleviating PHS in cereals under field conditions.
Function-related keywords:
- seed , ABA , breeding , ABA-biosynthesis , dormancy , ABA-catabolism , seed-dormancy
Literature:
- Antagonistic control of seed dormancy in rice by two bHLH transcription factors . DOI: 10.1038/s41588-022-01240-7 ; PMID: 36471073
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g06900.1
TCCACCTCCTCCTCTTCACCTTCTTCTCTTCTCCTCTCCACTTCTCCCCACCACCACCACCACCTCGATCGCATCCTCCGTTCTTGGCTGCGGCGCGCGTGGAGGAGGAGGAGGATGGACGAGCAGCGGGGACGCGGGGGGTTCGACGAACTGGTGCTCTTGCATCAGCAGCAGGAGCAGCGGAGGCGGAGGGAGCAGCAGCAGGAGGAGGAGGAGGAAGAGGAGGTGCGGCGCCAGATGTTCGGCGCGGTGGTCGGTGGGCTAGCCGCGTTCCCTGCGGCGGCGGCGGCTCTGGGACAGCAGCAGGTGGACTGCGGCGGGGAGCTGGGCGGGTTCTGCGACAGCGAGGCGGGCGGGTCGTCGGAGCCGGAGGCGGCGGCGGGGGCGCGCCCGCGCGGGGGATCCGGCAGCAAGCGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAAGAGGAGGAGGAGCAAGATCAACGAGAAGATGAAGGCATTGCAGAGCCTGATACCGAATTCCAACAAGACTGACAAGGCATCCATGCTTGACGAAGCCATCGAGTACCTGAAGCAACTGCAGCTCCAAGTGCAGATGCTCTCAATGAGAAACGGTGTTTACTTGAACCCATCTTATTTATCTGGAGCACTTGAGCCTGCGCAAGCATCACAGATGTTTGCAGCCCTTGGTGGTAACAACGTCACAGTGGTGCACCCCGGGACAGTGATGCCACCAGTGAACCAAAGCTCAGGAGCTCATCATTTGTTTGATCCATTGAACTCTCCTCCACAAAATCAACCACAATCTCTAATCCTACCAAGTGTTCCTAGCACAGCCATTCCTGAGCCTCCATTTCACCTGGAGTCATCACAGTCCCACCTTCGACAATTTCAGTTGCCTGGATCCTCTGAGATGGTGTTTCATGGAGAGATAATGCCAAAGCACCACCTATCATCACATCAAGAAAGTCTGCCAGGAAACGAGATGAACTCCATCAGGAAAGAATCATCCATGTTGAACACCAATAATTTTGATGGTGTCTCACTTAGCAAAGAGCAATCATAGGATATGGTACCAAAAAGTACAAGACATGCATAGCTTAGGACGTGGTTGCTGGTGGCATTGAAATCAGGTGCGAAAGAAGGATGACGTGACCTAGTTCAGTAGTCTAACAGACAGGCAGACTTTCAGAATTGCTTACCTCTATCAATAGTGCTATTATTCTTGAAGCGACCTGAATGCTTCACAAAACTAGCATGTAATCGTAATCGTTTTAATGAAGTCCATTCGAAAACTAGCATATAGATGAGATCATGAGACCATGTAATCATCTACGAAATGTTTAGTGAAGAGCAGCACGAGCAAAGTCCTCTTTGTACTGGTCTAAGCATCTAGTAGCACTCCTGTGAAGGATCAGAGATTCACAGAATATAGTCGTCTACTGAAACTTTTTAAGACTGAAGAAATCTTCGTGGTCCCCCTTTTGTC
CDS Sequence
- >LOC_Os06g06900.1
ATGGACGAGCAGCGGGGACGCGGGGGGTTCGACGAACTGGTGCTCTTGCATCAGCAGCAGGAGCAGCGGAGGCGGAGGGAGCAGCAGCAGGAGGAGGAGGAGGAAGAGGAGGTGCGGCGCCAGATGTTCGGCGCGGTGGTCGGTGGGCTAGCCGCGTTCCCTGCGGCGGCGGCGGCTCTGGGACAGCAGCAGGTGGACTGCGGCGGGGAGCTGGGCGGGTTCTGCGACAGCGAGGCGGGCGGGTCGTCGGAGCCGGAGGCGGCGGCGGGGGCGCGCCCGCGCGGGGGATCCGGCAGCAAGCGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAAGAGGAGGAGGAGCAAGATCAACGAGAAGATGAAGGCATTGCAGAGCCTGATACCGAATTCCAACAAGACTGACAAGGCATCCATGCTTGACGAAGCCATCGAGTACCTGAAGCAACTGCAGCTCCAAGTGCAGATGCTCTCAATGAGAAACGGTGTTTACTTGAACCCATCTTATTTATCTGGAGCACTTGAGCCTGCGCAAGCATCACAGATGTTTGCAGCCCTTGGTGGTAACAACGTCACAGTGGTGCACCCCGGGACAGTGATGCCACCAGTGAACCAAAGCTCAGGAGCTCATCATTTGTTTGATCCATTGAACTCTCCTCCACAAAATCAACCACAATCTCTAATCCTACCAAGTGTTCCTAGCACAGCCATTCCTGAGCCTCCATTTCACCTGGAGTCATCACAGTCCCACCTTCGACAATTTCAGTTGCCTGGATCCTCTGAGATGGTGTTTCATGGAGAGATAATGCCAAAGCACCACCTATCATCACATCAAGAAAGTCTGCCAGGAAACGAGATGAACTCCATCAGGAAAGAATCATCCATGTTGAACACCAATAATTTTGATGGTGTCTCACTTAGCAAAGAGCAATCATAG
Protein Sequence
- >LOC_Os06g06900.1
MDEQRGRGGFDELVLLHQQQEQRRRREQQQEEEEEEEVRRQMFGAVVGGLAAFPAAAAALGQQQVDCGGELGGFCDSEAGGSSEPEAAAGARPRGGSGSKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLSMRNGVYLNPSYLSGALEPAQASQMFAALGGNNVTVVHPGTVMPPVNQSSGAHHLFDPLNSPPQNQPQSLILPSVPSTAIPEPPFHLESSQSHLRQFQLPGSSEMVFHGEIMPKHHLSSHQESLPGNEMNSIRKESSMLNTNNFDGVSLSKEQS*