Information report for OsWHY1
Gene Details
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Functional Descriptions
- OsWHY1 Interacts with OsTRX z and is Essential for Early Chloroplast Development in Rice.
- What's more, OsWHY1 was found to be preferentially expressed in young leaves and was involved in chloroplast RNA editing and splicing.
- Mutation of OsWHY1 significantly affected the expression of chloroplast and ribosome development-related and chlorophyll synthesis-related genes.
- In conclusion, OsWHY1 contributes to early chloroplast development and normal seedling survival in rice.
Functional Keywords
Literature and News
Gene Resources
- UniProt: B9FRG7
- EMBL: AP003487, AP003767
- EnsemblPlants: Os06t0145800-00
- Gramene: Os06t0145800-00
- KEGG: osa:4340109
- Orthologous matrix: DYFEPQQ
- InterPro: IPR009044, IPR013742
- PANTHER: PTHR31745, PTHR31745:SF2
- SUPFAM: SSF54447
- Gene3D: 2.30.31.10
- OrthoDB: B9FRG7
- SWISS-MODEL: B9FRG7
Homologs
- Brachypodium distachyon: Bradi1g51040.1.p
- Hordeum vulgare: MLOC_11586.2, MLOC_11586.1
- Panicum virgatum: Pavir.4NG050500.2.p, Pavir.4NG050500.1.p, Pavir.4KG032400.1.p
- Setaria italica: Seita.4G033800.1.p
- Setaria viridis: Sevir.4G032700.1.p
- Triticum aestivum: Traes_4AL_FE94301FD.1
- Zea mays: GRMZM2G155662_P01
Sequences
cDNA Sequence
- >LOC_Os06g05350.1
CTCTGCTCCTCCCCAATCCAAACCCGCTCCCCCACCACACCACAACCTGTTCGACGAAATGCCGCCACCGTCGCCGCCGCTCTTCCTCTCGCTCCCCTCGCCGCCGCCGCCGCCGCTGCCGCACCTCCTGCCTAGCCACAGGCCGGCGGCTGCACTGACGCTAGCCCCGGCGCTGTCCAGCAGGAGGGTTTCTTCCGTCTGCCCCGTGGCCTCCCAGCGCCACTCCGACTACTTCGACCCCCGTGCCCCGCCGCCTCCGCCGCCGCGCGACGGGTACGGGGGCCCGGCGTACTCGCCTCCTGCGGCGCAAGGTGGGCAGCAGAATGGGAGGGTGTTCTCTACGTACAGCATCTACAAGGGCAAGGCGGCGATGTCGCTCGACCCCAGGCCGCCGCAGTTCGTGCCGCTCGATTCTGGGGCTTACAAGGTTGTGAAGGAGGGATTCGTGCTGCTACAGTTCGCGCCCGCTGTGGCGACTCGTCAGTATGATTGGACTCGCAAGCAGGTGTTCTCATTATCTGTGTGGGAGATGGGTAGCTTGCTTACTCTAGGTCCAACTGATTCTTGCGAGTTCTTCCATGACCCTTTCAAGGGGAGGAGTGATGAAGGTAAAGTGCGGAAGGTTCTAAAAGTTGAGCCAACACCAGATGGCAACAGTCGCTTTTTCAATCTCAGTGTTCAAAACCGTCTCCTGAACATCGATGAGAATATTTACATCCCTATAACCAAAGGAGAATTTGCTGTGATTGTATCGACTTTCAATTATATCATACCACATCTTATGGGCTGGAGCACATTTACAAATTCTATAAAACCTGAAGATTCACGGGCGTACACTAGGCCACAATCCGGGCCTGAATATGAATGGCGGAGGTGACCAAAGGGTGTCTGAAGGGAGATGGCAACTGTCCAAAGGATAGTTCTTGGTGGCTTTGTTAGAAAGTACTTGGTCCACAATTTGGACGGGCAATCTCTGATCTAGTTAGTTAGCGAATGAACTTTCATTTCTTGCCTTTGTTACATTTCTTCTTAGAGCAGGTGGGTGGAAGCCGTTTTATGTAAAATGTTTCTCTGCTGTCTAGATTTGGAGGTCTTGATATGGTAGACAACTGCTAGGATCTGGCATTTTGGGGGCAATGACATTGTGACCCAATCAGGTCTGATGGACAAAGATGGGAGGAATTGCAGAAGCCCTAATTAACGAACGTTCGTGCAGTTTGGTTACTAGTGAACACCTTATCCACTCCCGCCCCCCAACTTTCAGCTTTGCTCCGGGGCTCTGTTTTCATTTAGGGATGAAAGTGCTTGCCTTCGTTGCTTTTTGTGTTAATATAATTCAGCCGCCGTTCCTTTATTGACCGGGGAAAAAGAGACAAGATTCTATTCTAGCAGTGCTCCACCATGGACCGGTGCTACGGGGGCGCCACGGAGGATTTTGTCCGACGTGTCGTGTGGAACCGGGACCAAACTTGGTCGCTCGTCCCCAAGCAGAGCAACGCGCAACCTTGCTCGGTCGAATCCACGCGCCGCCAAAAAAACGCGAGGAGCGAGCGCTGTGGGCGTCGGTGCTTGGCCGCCCGTGACCTCGCGCACGCAGCACTCGTAGAAATTCCAGATTCGCCCATGGAAAAATCCCTTCCCACGCCTGCAATTCATCCTCCCACCACCGAGTCCTTTCTCCCGCGCCGGCATCAGCCTCGCCGCCATGAGGACCAAATCCATGGCGGCCTCGGCATCGATTGGAACGGCGCCGGAGCAGCTAC
CDS Sequence
- >LOC_Os06g05350.1
ATGCCGCCACCGTCGCCGCCGCTCTTCCTCTCGCTCCCCTCGCCGCCGCCGCCGCCGCTGCCGCACCTCCTGCCTAGCCACAGGCCGGCGGCTGCACTGACGCTAGCCCCGGCGCTGTCCAGCAGGAGGGTTTCTTCCGTCTGCCCCGTGGCCTCCCAGCGCCACTCCGACTACTTCGACCCCCGTGCCCCGCCGCCTCCGCCGCCGCGCGACGGGTACGGGGGCCCGGCGTACTCGCCTCCTGCGGCGCAAGGTGGGCAGCAGAATGGGAGGGTGTTCTCTACGTACAGCATCTACAAGGGCAAGGCGGCGATGTCGCTCGACCCCAGGCCGCCGCAGTTCGTGCCGCTCGATTCTGGGGCTTACAAGGTTGTGAAGGAGGGATTCGTGCTGCTACAGTTCGCGCCCGCTGTGGCGACTCGTCAGTATGATTGGACTCGCAAGCAGGTGTTCTCATTATCTGTGTGGGAGATGGGTAGCTTGCTTACTCTAGGTCCAACTGATTCTTGCGAGTTCTTCCATGACCCTTTCAAGGGGAGGAGTGATGAAGGTAAAGTGCGGAAGGTTCTAAAAGTTGAGCCAACACCAGATGGCAACAGTCGCTTTTTCAATCTCAGTGTTCAAAACCGTCTCCTGAACATCGATGAGAATATTTACATCCCTATAACCAAAGGAGAATTTGCTGTGATTGTATCGACTTTCAATTATATCATACCACATCTTATGGGCTGGAGCACATTTACAAATTCTATAAAACCTGAAGATTCACGGGCGTACACTAGGCCACAATCCGGGCCTGAATATGAATGGCGGAGGTGA
Protein Sequence
- >LOC_Os06g05350.1
MPPPSPPLFLSLPSPPPPPLPHLLPSHRPAAALTLAPALSSRRVSSVCPVASQRHSDYFDPRAPPPPPPRDGYGGPAYSPPAAQGGQQNGRVFSTYSIYKGKAAMSLDPRPPQFVPLDSGAYKVVKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEMGSLLTLGPTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNSRFFNLSVQNRLLNIDENIYIPITKGEFAVIVSTFNYIIPHLMGWSTFTNSIKPEDSRAYTRPQSGPEYEWRR*