Gene Details:
- MSU gene ID: LOC_Os06g04090
- RAPdb gene ID: Os06g0131700
- Gene Symbol: OsSWN1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsSWN1 triggers the induction of polysaccharide and lignin biosynthetic gene expressions, however resulting in no significant impact on the lignin content in the transgenic plants.
Function-related keywords:
Literature:
- Transcriptional activation of secondary wall biosynthesis by rice and maize NAC and MYB transcription factors . DOI: 10.1093/pcp/pcr123 ; PMID: 21908441
- Change in lignin structure, but not in lignin content, in transgenic poplar overexpressing the rice master regulator of secondary cell wall biosynthesis . DOI: 10.1111/ppl.12684 ; PMID: 29266248
- Lodging variation of weedy rice in China and its epigenetic influencing mechanisms . DOI: 10.1093/jxb/erac480 ; PMID: 36478231
Related News:
Gene Resources:
- NCBI ID: JN634070
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os06g04090.1
TTGTACCCCATCCGAGATCAATATCCATCCATCCATCACCACCTAGCAGCTCTACACCTCTCTCTTATATTAGCTCTCTCTCTCTCTCTACCCCCATTCATGCTCATCTCCTTCTAGCTTCCAGCTTAATCCCTTCCTTGTCAATGTTAATGGACAAACTCTGAGCATTGCACTACCCATCATCTCCTAGCTAGACTCACCTTAGCTTGTCTCTCTGCTGCTCCAGTGTGTGATTCTTTCTCCCATTTCCTGTTTGGTTTGCACTGAGTGAACAAGCAATTAAGCTTGGTAGTAGTAGTAGTTGTTGTATTGATCGATCGATCGATCTAGAGACGACGATGAGCATATCGGTGAACGGGCAGTCGGTGGTGCCACCGGGGTTCCGGTTCCACCCAACGGAGGAGGAGCTCCTGACATACTACCTGAAGAAGAAGGTGGCCTCGGAGCGCATCGACCTCGACGTCATCCGCGACGTCGACCTCAACAAGCTCGAGCCATGGGACATCCAAGAGAGGTGCAGGATTGGGTCAGGGCCGCAAAACGACTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACGGGGACGAGGACGAACCGGGCAACGGCGGCCGGCTTCTGGAAGGCCACCGGCCGCGACAAGGCCATCTACTCCAGCTCCAACCGCATCGGCATGCGCAAAACCCTCGTCTTCTACAAGGGCCGTGCCCCCCACGGCCAGAAATCAGACTGGATCATGCACGAGTACCGCCTCGACGACCCCTCCTCCGCCTCCGCCTCCGTCTCCGTCAACCTCCCCTCCTACTACTCTTCCTCCTCATCGTCATCTTCCCCAATGCACGGTGTCGCCGGAGACCAAGGAGCTCAGGAGGAAGGCTGGGTGATCTGCAGGGTGTTCAAGAAGAAGAACCTCGTGCACCACGGCGGCGGCGCCGCCGCGGCGAGCCACCACGCGGCGGCCAAGCTCGCGGCGGCGGCCATGGAGGGCAGCCCGAGCAACTGCTCGACGGTGACCGTTAGCGACCACGTCAAGGCGCAGATGCTGCACTCGTCCGCCAGCGACGACGCCCTCGACCACATCCTCCAGTACATGGGCCGCTCCGGCTGCAAGCAGGAGACCAAGCCGGCGGCGATGTCGGCGTCGTCGGCGGCAGCGGCGGCGGCGCTGGAGCAGCACCTCAGTACGCCTCAGTACGGCAAGTTCATGAAGCTTCCGCCGCTCGAGCACGTCGCCGGCGGCGTGGGCCTCCTGGCGGCGGCCGGCGGCGGCGGCGAGTACTGCTCCGCCGCCGACGCGTCGGGGATCGCCGACTGGGACACGCTGGACCGGCTCGCGGCGTCGTACGAGCTCAACGGCGCCCTCTCCGACGTCGCCTCCGGCAAGAACATGGCCGGCTTCTTCGACGTCGTCGATCAGCCCGCCGGCGCCGCCGCCTTCTCCTCCGGCGACGGCGACCTGTGGAGCCTTGCGCGGTCGGTGTCATCGTCGCTACACGCAGACTTGACGACCATGAATAACGTATAATAATTGGAGACAAGAGGTGACGATGGAGATGATGCATCTAGACGTGGATGGCGTATGCGTGCACTAACTCTACTCTTAATCTGGTCGGTCTACGCATATTGCATGCATGCATGGACGACGGTATTGTACGTACGTGATCAATAATTAATTACTAGTTAGGGTTCCAGCGAGAGTACAAGACGACGACGACGACACAATAGCTAGCTGAGCTGGCCATGTGAGCAAGCTCTAGACACTAGGTCAAGATCTAACCGTCGATCGATCTGAGCCGTTGATCGATCGATCGACGATGATGGTGTTGATCGATCGAATTATAGTGCAGTGGTCGAGCGAGTTGTTGTGTCGATCTGAAACAAGAGAGAGGAAAAAAAGAATTAAAAGGACGTACGGCGTGGTAGGAGAGAGAGAGAGAGAGCATATATAAATATTATGTATCTATATATTGTTATATATTGTACCTATAGCTTATTATATATCAAAGACATTTTTCTAGTGCAGCGAGGTGTGATTTCTTTTCTGATGATCATATCATATATATCATCATCGATCACTGATCACCGTGTGAGTGTACTAATTATTGTGTGATCGATCGCTCGATGGATGGATTAATAAACTAGTTGTGTGCCTGTGCGCGTGTTTTTTCAGA
CDS Sequence
- >LOC_Os06g04090.1
ATGAGCATATCGGTGAACGGGCAGTCGGTGGTGCCACCGGGGTTCCGGTTCCACCCAACGGAGGAGGAGCTCCTGACATACTACCTGAAGAAGAAGGTGGCCTCGGAGCGCATCGACCTCGACGTCATCCGCGACGTCGACCTCAACAAGCTCGAGCCATGGGACATCCAAGAGAGGTGCAGGATTGGGTCAGGGCCGCAAAACGACTGGTACTTCTTCAGCCACAAGGACAAGAAGTACCCGACGGGGACGAGGACGAACCGGGCAACGGCGGCCGGCTTCTGGAAGGCCACCGGCCGCGACAAGGCCATCTACTCCAGCTCCAACCGCATCGGCATGCGCAAAACCCTCGTCTTCTACAAGGGCCGTGCCCCCCACGGCCAGAAATCAGACTGGATCATGCACGAGTACCGCCTCGACGACCCCTCCTCCGCCTCCGCCTCCGTCTCCGTCAACCTCCCCTCCTACTACTCTTCCTCCTCATCGTCATCTTCCCCAATGCACGGTGTCGCCGGAGACCAAGGAGCTCAGGAGGAAGGCTGGGTGATCTGCAGGGTGTTCAAGAAGAAGAACCTCGTGCACCACGGCGGCGGCGCCGCCGCGGCGAGCCACCACGCGGCGGCCAAGCTCGCGGCGGCGGCCATGGAGGGCAGCCCGAGCAACTGCTCGACGGTGACCGTTAGCGACCACGTCAAGGCGCAGATGCTGCACTCGTCCGCCAGCGACGACGCCCTCGACCACATCCTCCAGTACATGGGCCGCTCCGGCTGCAAGCAGGAGACCAAGCCGGCGGCGATGTCGGCGTCGTCGGCGGCAGCGGCGGCGGCGCTGGAGCAGCACCTCAGTACGCCTCAGTACGGCAAGTTCATGAAGCTTCCGCCGCTCGAGCACGTCGCCGGCGGCGTGGGCCTCCTGGCGGCGGCCGGCGGCGGCGGCGAGTACTGCTCCGCCGCCGACGCGTCGGGGATCGCCGACTGGGACACGCTGGACCGGCTCGCGGCGTCGTACGAGCTCAACGGCGCCCTCTCCGACGTCGCCTCCGGCAAGAACATGGCCGGCTTCTTCGACGTCGTCGATCAGCCCGCCGGCGCCGCCGCCTTCTCCTCCGGCGACGGCGACCTGTGGAGCCTTGCGCGGTCGGTGTCATCGTCGCTACACGCAGACTTGACGACCATGAATAACGTATAA
Protein Sequence
- >LOC_Os06g04090.1
MSISVNGQSVVPPGFRFHPTEEELLTYYLKKKVASERIDLDVIRDVDLNKLEPWDIQERCRIGSGPQNDWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAIYSSSNRIGMRKTLVFYKGRAPHGQKSDWIMHEYRLDDPSSASASVSVNLPSYYSSSSSSSSPMHGVAGDQGAQEEGWVICRVFKKKNLVHHGGGAAAASHHAAAKLAAAAMEGSPSNCSTVTVSDHVKAQMLHSSASDDALDHILQYMGRSGCKQETKPAAMSASSAAAAAALEQHLSTPQYGKFMKLPPLEHVAGGVGLLAAAGGGGEYCSAADASGIADWDTLDRLAASYELNGALSDVASGKNMAGFFDVVDQPAGAAAFSSGDGDLWSLARSVSSSLHADLTTMNNV*