Gene Details:

Functional Descriptions:

  • In the OsATM3 T-DNA insertion mutant, the fourth leaf fails to develop and the lateral roots are short.
  • Promoter-β-glucuronidase staining of the transgenic line indicated that OsATM3 is highly expressed in lateral root primordia, root tip meristem zones, and shoot apical meristem regions.
  • Massive cell death occurred in the OsATM3 root tip meristem zone.
  • Quantitative RT-PCR revealed transcriptional reprogramming of the genes in the OsATM3 and RNAi lines involved in DNA repair and cell cycle arrest.
  • Cytosolic iron-sulfur protein activities were significantly reduced in both OsATM3 and RNA interference (RNAi) transgenic lines.
  • The expression profiles of many iron metabolism genes were altered in the OsATM3 and RNAi lines.
  • Glutathione metabolism was impaired and reactive oxygen species (ROS), particularly superoxide, accumulated in OsATM3.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os06g03770.1
    CACAAAAAAACAAAAAACAAAAAACGTAGCACCAGTAGCCGCCTTTTCCCCATCTCCACTGGCCGCCGCCGGCGACATCGCCGGCGCCGCCGAGCTCCACCGCTCCGATCCCACTCCGAACAGCCGAGCTGCGGTTTCCAAGGAACCGCGGGCGAGCCGAGCCCGACCCGTTATCAGCCCCGTTTTTTTAACGGGGCAGTGTCCAAGTCCAACTCCGCCTCTTCCACGCTTCGGCTTCCATCCAATCATCTGCATCGTCGTCGCCGGCGAGCGCCATGAGGCCGACCTCCCGCATACTGGCCGCGGGCCACCTCCTCCGCGGCTCACGCTCACGCTACGACCCCTCGCCGGTCGCCGCTGCCGCCCCCATATTCCGGCGGCCGCCGACCGTGCCGAGGCCTCTCCCGAGCCCTCTGCTCGGAGGCTTCGGGCCGAATTGTTGGGTTTATCCCGGCGACGGGAAGTATGCCCCCTTTGGTCGCCTCAGCTGCTTCATGTCGGACTCCACCTACCCGCCGCCTCCCCGCGATGTGAGAGGACATGCATTTTCCACATCTGCCAATGCTGTGGCAGTTGGGAAATCATCTGATGACAAAGTGAAGAAAGATATCTCCAAAAAGGATGTTGATGATCAGATAGCAGATACACAGATACTGAAAAACCTTGGGAAATACTTATTGTTGAATGATAGCCCGGATTTCCGCTTCAGGCTTATATTGTCATTGGGCCTCTTAGTTGGGGCAAAGGTTATAAATGTTCAAGTGCCTTTCTTGTTTAAGCTTGCTGTCGATTGGCTTGCAGCCCTTGCTGGTGCTGAAACTTCACTTGCATCATTCACAGAGGCTAATGCTACCCTATTGGCTCTCTTTGCAAGCCCAGCAGCTGTTCTGATTGGATATGGAATTGCACGATCGGGAGTATCAGCCTGTACAGAACTGCGAAATGCTGTCTTTTCTAAAGTGACATTGAGAGCCATCCGTTCAGTCTCCAGTACGGTATTTTCGCACTTGCATGAGCTTGATCTTCGTTATCATCTAAGCCGGCAAACTGGTGCCCTAAATCGCATAATTGATCGAGGTAGTCGTGCGATAAATTACATCCTTACAGTGATGGTGTTCAATGTTGTTCCCACAATATTGGAGATTGGTATGGTGTCAAGTATACTTGCATACAAATTTGGTTCCACCTTTGCTTGGATTACTTCAGTTTCTGTTGCTACTTATATTGCTTTCACCTTGGCTGTGACGCAGTGGCGGACCAAATTCAGGACAGCCATGAATAAAGCTGATAACGCTTCTAGCACAGTGGCAGTTGACTCCCTTCTGAACTATGAGACTGTCAAGTACTTCAACAATGAACAATTTGAAGTTGAGAAGTATGACAAATATTTAAAGAAGTATGAGGATGCTGCACTGAAAACCCAAAGTAGCCTTGCCTACCTGAACTTTGGACAAAATATCATATTTAGCTCGGCTTTATCCACGGCTATGGTTTTGAGTTCATACGGTGTAATGAGTGGTGCTCTGACTGTCGGTGATTTGGTTATGGTTAATGGTCTTCTATTCCAACTTTCTTTGCCTCTGAACTTCCTTGGAAGTGTCTATCGAGAATCTAGGCAAAGCCTGATTGACATGAAGTCTATGTTTCAATTGCTTGAGGAAAAACCTGGAATAAAGGATGAACCACATGCACAGCCTTTGCAGTTCAAGGGAGGACGCATTGAATTTGAGAACGTGCATTTTGGGTACGTACCAGAAAGGAAGATTCTTAAGGGTGCCACGTTCACTGTACCTGCAGGAAAGAGTGTTGCAATCGTTGGAACTAGTGGCAGCGGAAAGTCAACCATACTTAGGCTTCTCTTCAGATTTTTTGACTCCTCTTCAGGATCTATTCGAATAGATGGGCAAGATATCCGAGAGGTGACACTGGATAGTCTCCGGAAGTGTATTGGTGTTGTACCGCAAGATACGGTACTTTTTAATGACACAATTAAGCATAATATACAATATGGGCGGTTATCAGCAACAGATGAGGAGGTTTATGACGTTGCCCGCCGGGCTGCTATTCATGATACAATTATGAACTTTCCTGACAAGTACAACACAGTTGTGGGAGAGCGAGGATTAAAGTTAAGCGGTGGGGAGAAACAACGAGTATCAATTGCTCGTGTATTCTTGAAGGAACCTTCCATTCTATTGTGTGATGAAGCTACAAGCGCTCTTGATAGCACCACCGAAGCGTCAATTTTAAATTCTCTGAAGACTTTGTCCGTTGACCGTACCTCTATCTTTATTGCACATCGACTGACAACTGCAATGCAATGTGATGAGATTATTGTTTTGGAGAATGGGGAGGTAGTGGAACAAGGACCACATGATTTTCTGCTGTCAAAGGGTGGCCGATATGCTGAATTGTGGTCACAGCAGAATAACAGTGATGCCATCGATGCTGCCGCGGTTAGCTTAGAGGTTTCATAGACTATATACATAATTCCCTTTTGCAAGGGAAAATGCAAACCATATTTGAATGAAAGAAGGCTTCCCCATATCTGCATTGTAAATTGAATGGTTAGGTTTTTAGATATCGGGGAACAGAAATTTATAGCTTAGGAGCAAATAACTCCGTTTGAAAGAAAGCCAGGAGGCAAAATTTTCCTCTTTGAGGAAACACCCAACAGTTCGACATGTTTCCATGATGTAAGCATTTTTTTTACTAATCCAAGTAAATATTTTTTCCCACTAAATCCTATGACCGTGATCTGATCGA
CDS Sequence
  • >LOC_Os06g03770.1
    ATGAGGCCGACCTCCCGCATACTGGCCGCGGGCCACCTCCTCCGCGGCTCACGCTCACGCTACGACCCCTCGCCGGTCGCCGCTGCCGCCCCCATATTCCGGCGGCCGCCGACCGTGCCGAGGCCTCTCCCGAGCCCTCTGCTCGGAGGCTTCGGGCCGAATTGTTGGGTTTATCCCGGCGACGGGAAGTATGCCCCCTTTGGTCGCCTCAGCTGCTTCATGTCGGACTCCACCTACCCGCCGCCTCCCCGCGATGTGAGAGGACATGCATTTTCCACATCTGCCAATGCTGTGGCAGTTGGGAAATCATCTGATGACAAAGTGAAGAAAGATATCTCCAAAAAGGATGTTGATGATCAGATAGCAGATACACAGATACTGAAAAACCTTGGGAAATACTTATTGTTGAATGATAGCCCGGATTTCCGCTTCAGGCTTATATTGTCATTGGGCCTCTTAGTTGGGGCAAAGGTTATAAATGTTCAAGTGCCTTTCTTGTTTAAGCTTGCTGTCGATTGGCTTGCAGCCCTTGCTGGTGCTGAAACTTCACTTGCATCATTCACAGAGGCTAATGCTACCCTATTGGCTCTCTTTGCAAGCCCAGCAGCTGTTCTGATTGGATATGGAATTGCACGATCGGGAGTATCAGCCTGTACAGAACTGCGAAATGCTGTCTTTTCTAAAGTGACATTGAGAGCCATCCGTTCAGTCTCCAGTACGGTATTTTCGCACTTGCATGAGCTTGATCTTCGTTATCATCTAAGCCGGCAAACTGGTGCCCTAAATCGCATAATTGATCGAGGTAGTCGTGCGATAAATTACATCCTTACAGTGATGGTGTTCAATGTTGTTCCCACAATATTGGAGATTGGTATGGTGTCAAGTATACTTGCATACAAATTTGGTTCCACCTTTGCTTGGATTACTTCAGTTTCTGTTGCTACTTATATTGCTTTCACCTTGGCTGTGACGCAGTGGCGGACCAAATTCAGGACAGCCATGAATAAAGCTGATAACGCTTCTAGCACAGTGGCAGTTGACTCCCTTCTGAACTATGAGACTGTCAAGTACTTCAACAATGAACAATTTGAAGTTGAGAAGTATGACAAATATTTAAAGAAGTATGAGGATGCTGCACTGAAAACCCAAAGTAGCCTTGCCTACCTGAACTTTGGACAAAATATCATATTTAGCTCGGCTTTATCCACGGCTATGGTTTTGAGTTCATACGGTGTAATGAGTGGTGCTCTGACTGTCGGTGATTTGGTTATGGTTAATGGTCTTCTATTCCAACTTTCTTTGCCTCTGAACTTCCTTGGAAGTGTCTATCGAGAATCTAGGCAAAGCCTGATTGACATGAAGTCTATGTTTCAATTGCTTGAGGAAAAACCTGGAATAAAGGATGAACCACATGCACAGCCTTTGCAGTTCAAGGGAGGACGCATTGAATTTGAGAACGTGCATTTTGGGTACGTACCAGAAAGGAAGATTCTTAAGGGTGCCACGTTCACTGTACCTGCAGGAAAGAGTGTTGCAATCGTTGGAACTAGTGGCAGCGGAAAGTCAACCATACTTAGGCTTCTCTTCAGATTTTTTGACTCCTCTTCAGGATCTATTCGAATAGATGGGCAAGATATCCGAGAGGTGACACTGGATAGTCTCCGGAAGTGTATTGGTGTTGTACCGCAAGATACGGTACTTTTTAATGACACAATTAAGCATAATATACAATATGGGCGGTTATCAGCAACAGATGAGGAGGTTTATGACGTTGCCCGCCGGGCTGCTATTCATGATACAATTATGAACTTTCCTGACAAGTACAACACAGTTGTGGGAGAGCGAGGATTAAAGTTAAGCGGTGGGGAGAAACAACGAGTATCAATTGCTCGTGTATTCTTGAAGGAACCTTCCATTCTATTGTGTGATGAAGCTACAAGCGCTCTTGATAGCACCACCGAAGCGTCAATTTTAAATTCTCTGAAGACTTTGTCCGTTGACCGTACCTCTATCTTTATTGCACATCGACTGACAACTGCAATGCAATGTGATGAGATTATTGTTTTGGAGAATGGGGAGGTAGTGGAACAAGGACCACATGATTTTCTGCTGTCAAAGGGTGGCCGATATGCTGAATTGTGGTCACAGCAGAATAACAGTGATGCCATCGATGCTGCCGCGGTTAGCTTAGAGGTTTCATAG
Protein Sequence
  • >LOC_Os06g03770.1
    MRPTSRILAAGHLLRGSRSRYDPSPVAAAAPIFRRPPTVPRPLPSPLLGGFGPNCWVYPGDGKYAPFGRLSCFMSDSTYPPPPRDVRGHAFSTSANAVAVGKSSDDKVKKDISKKDVDDQIADTQILKNLGKYLLLNDSPDFRFRLILSLGLLVGAKVINVQVPFLFKLAVDWLAALAGAETSLASFTEANATLLALFASPAAVLIGYGIARSGVSACTELRNAVFSKVTLRAIRSVSSTVFSHLHELDLRYHLSRQTGALNRIIDRGSRAINYILTVMVFNVVPTILEIGMVSSILAYKFGSTFAWITSVSVATYIAFTLAVTQWRTKFRTAMNKADNASSTVAVDSLLNYETVKYFNNEQFEVEKYDKYLKKYEDAALKTQSSLAYLNFGQNIIFSSALSTAMVLSSYGVMSGALTVGDLVMVNGLLFQLSLPLNFLGSVYRESRQSLIDMKSMFQLLEEKPGIKDEPHAQPLQFKGGRIEFENVHFGYVPERKILKGATFTVPAGKSVAIVGTSGSGKSTILRLLFRFFDSSSGSIRIDGQDIREVTLDSLRKCIGVVPQDTVLFNDTIKHNIQYGRLSATDEEVYDVARRAAIHDTIMNFPDKYNTVVGERGLKLSGGEKQRVSIARVFLKEPSILLCDEATSALDSTTEASILNSLKTLSVDRTSIFIAHRLTTAMQCDEIIVLENGEVVEQGPHDFLLSKGGRYAELWSQQNNSDAIDAAAVSLEVS*