Information report for CYCLOPS;OsIPD3
Gene Details
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Functional Descriptions
- OsIPD3, an ortholog of the Medicago truncatula DMI3 interacting protein IPD3, is required for mycorrhizal symbiosis in rice.
- OsIPD3 mutants are unable to form mycorrhizal symbiosis.
Functional Keywords
Literature and News
- OsIPD3, an ortholog of the Medicago truncatula DMI3 interacting protein IPD3, is required for mycorrhizal symbiosis in rice . DOI: 10.1111/j.1469-8137.2008.02612.x ; PMID: 18761634
- CYCLOPS, a mediator of symbiotic intracellular accommodation . DOI: 10.1073/pnas.0806858105 ; PMID: 19074278
- Identification of a small set of genes commonly regulated in rice roots in response to beneficial rhizobacteria . DOI: 10.1007/s12298-020-00911-1 ; PMID: 33424163
Sequences
cDNA Sequence
- >LOC_Os06g02520.1
ATGGAAATGGAGGGCAGGGGTCTGTCTGAGCTGTTCAGGAACACAAGTGAAGATATGTTCCTAAAGGCGATGATGGAGAACTCGATGGGAGTGGCGGCGGCGGCACCAAGCATGGAGATGATGGGGTTCAGAAATCTGTCCCAAGGTTTCAGAGAAGACAGCGAGGAGTTGTTCAATAGCTGGCTTATGAATGGAGAGATTCCAGGATTTAGTGCCATGAATAATCGCCCTCGACAACCATCTAGGTTGTCATCAGAAGCAGCTGGCTTTCCTAATCAGCAACATGAAATTGCTCAAGAACATTTTCCTACTGACAACCTGATTCCGCAGAATTTGGCAGTTCATTCAGAGTTTACAATGAACCATAACCAGCAACAACTCAAGAATGCAGCAGAAAAGGGAATGCAAGCTAGTGACCTACTTTTGGCAAAGGCCTGGTTTCATAGTACTCAACCAATGACTAGAAGCAGATCTTCAGAACTCAGGAAGAGATATGCGGCGATGCAAAGTAACATGCCACCAATAACAACTGAAACAATTGAAACAGCTAACAAACTGAGACAAGATCTGACAAACGCAAGTACTGTGAACAGTGCACCAATGAGCAATACACCCAGTCAGACTCCAACATTTGTATCTCCTTCAAGTTCATCAACATCCCCTTTGGATAATCCACATATAGTAGCACAAGATACCATCACCTCAGTTGTGAGCATGCTCAAGGATACACTGGAGCGCAAGAAGCTTAGTAGCCATGCTAATGGAGACACCTCATCAGGCATATCTTTTGGTTTTTATGACAGTCAACATTTTCAACAGAACATTCTTGGAGGAACAGATATATTCCCTCTGGTGACAACTTCCCAAATTCAAGACTCGGTGATGCTTCCGAAAGTCGAGAGGCCAACAGAACAAGGCAGTGGGAACTTTGTTGCTCCTGCAAACCAGGTTTGGCTTGGTACAGCATCTCGAGAGCCTTCGCAGAGTGGATCATCTACTGCTATCCCAGCACCTTCAGCTGGATTTGAAGTTTGTGATGACCTGCCTCCCATTGGGCAAGCAATGACTGTTTGTGAGAGTACTAGAACAAATGCTGCAAATGGCAATGGGACAGCTGACTGTAGATCAAAAGGCAAAGATTTCAGAGAGAGAATACTAAAAGAAAATTTGAAGGATGACAGAAAGAAAGGGAGCCTAACTCGAATGGGATCCATTTCATCTGAACAAGCAGATAAAGGAGATCCTACAAAGAAACGCAGGGTTGAGCGCTCACGCAAGATGGCAGAAGCAAAGGAAAGAAGCTCAACACCAGTAATACCATCTGACATACAGGTTGTGCTTAAGCGCTGCGAAACTCTAGAGAAAGAGGTCCGGTCACTGAAGCTTAACCTCTCCTTCATGAACCGGAAAGATTCAGAACAGACCAAGCAGATAGAAGAGCTTCAGAAGCAAAATGAGGATCTGGTGGAAGAAAAAGAGCGACTACTAGAAGAGATAGAACGAATCGTCTCTGATACCAACACATAATAGGCCATCTCCCTGTATTAGTACCCCTACTGTAGAACAAAGAATACTAGATACAAAGTTATAAACACACAAACCAAAAGGACTGCAGAATTACAGTGCTGGCCTAAATGTACCATTCTTTTCCTGTTCTTATCTTAACACAAACACATACCACTACCAGCAAGCAAAGGATTGAGAATTGCATTCTACTTCCATCTAGAGAGATGGGGAGTAGCATCAAAATGTTCAGAAATCAGATCGGGGAGC
CDS Sequence
- >LOC_Os06g02520.1
ATGGAAATGGAGGGCAGGGGTCTGTCTGAGCTGTTCAGGAACACAAGTGAAGATATGTTCCTAAAGGCGATGATGGAGAACTCGATGGGAGTGGCGGCGGCGGCACCAAGCATGGAGATGATGGGGTTCAGAAATCTGTCCCAAGGTTTCAGAGAAGACAGCGAGGAGTTGTTCAATAGCTGGCTTATGAATGGAGAGATTCCAGGATTTAGTGCCATGAATAATCGCCCTCGACAACCATCTAGGTTGTCATCAGAAGCAGCTGGCTTTCCTAATCAGCAACATGAAATTGCTCAAGAACATTTTCCTACTGACAACCTGATTCCGCAGAATTTGGCAGTTCATTCAGAGTTTACAATGAACCATAACCAGCAACAACTCAAGAATGCAGCAGAAAAGGGAATGCAAGCTAGTGACCTACTTTTGGCAAAGGCCTGGTTTCATAGTACTCAACCAATGACTAGAAGCAGATCTTCAGAACTCAGGAAGAGATATGCGGCGATGCAAAGTAACATGCCACCAATAACAACTGAAACAATTGAAACAGCTAACAAACTGAGACAAGATCTGACAAACGCAAGTACTGTGAACAGTGCACCAATGAGCAATACACCCAGTCAGACTCCAACATTTGTATCTCCTTCAAGTTCATCAACATCCCCTTTGGATAATCCACATATAGTAGCACAAGATACCATCACCTCAGTTGTGAGCATGCTCAAGGATACACTGGAGCGCAAGAAGCTTAGTAGCCATGCTAATGGAGACACCTCATCAGGCATATCTTTTGGTTTTTATGACAGTCAACATTTTCAACAGAACATTCTTGGAGGAACAGATATATTCCCTCTGGTGACAACTTCCCAAATTCAAGACTCGGTGATGCTTCCGAAAGTCGAGAGGCCAACAGAACAAGGCAGTGGGAACTTTGTTGCTCCTGCAAACCAGGTTTGGCTTGGTACAGCATCTCGAGAGCCTTCGCAGAGTGGATCATCTACTGCTATCCCAGCACCTTCAGCTGGATTTGAAGTTTGTGATGACCTGCCTCCCATTGGGCAAGCAATGACTGTTTGTGAGAGTACTAGAACAAATGCTGCAAATGGCAATGGGACAGCTGACTGTAGATCAAAAGGCAAAGATTTCAGAGAGAGAATACTAAAAGAAAATTTGAAGGATGACAGAAAGAAAGGGAGCCTAACTCGAATGGGATCCATTTCATCTGAACAAGCAGATAAAGGAGATCCTACAAAGAAACGCAGGGTTGAGCGCTCACGCAAGATGGCAGAAGCAAAGGAAAGAAGCTCAACACCAGTAATACCATCTGACATACAGGTTGTGCTTAAGCGCTGCGAAACTCTAGAGAAAGAGGTCCGGTCACTGAAGCTTAACCTCTCCTTCATGAACCGGAAAGATTCAGAACAGACCAAGCAGATAGAAGAGCTTCAGAAGCAAAATGAGGATCTGGTGGAAGAAAAAGAGCGACTACTAGAAGAGATAGAACGAATCGTCTCTGATACCAACACATAA
Protein Sequence
- >LOC_Os06g02520.1
MEMEGRGLSELFRNTSEDMFLKAMMENSMGVAAAAPSMEMMGFRNLSQGFREDSEELFNSWLMNGEIPGFSAMNNRPRQPSRLSSEAAGFPNQQHEIAQEHFPTDNLIPQNLAVHSEFTMNHNQQQLKNAAEKGMQASDLLLAKAWFHSTQPMTRSRSSELRKRYAAMQSNMPPITTETIETANKLRQDLTNASTVNSAPMSNTPSQTPTFVSPSSSSTSPLDNPHIVAQDTITSVVSMLKDTLERKKLSSHANGDTSSGISFGFYDSQHFQQNILGGTDIFPLVTTSQIQDSVMLPKVERPTEQGSGNFVAPANQVWLGTASREPSQSGSSTAIPAPSAGFEVCDDLPPIGQAMTVCESTRTNAANGNGTADCRSKGKDFRERILKENLKDDRKKGSLTRMGSISSEQADKGDPTKKRRVERSRKMAEAKERSSTPVIPSDIQVVLKRCETLEKEVRSLKLNLSFMNRKDSEQTKQIEELQKQNEDLVEEKERLLEEIERIVSDTNT*