Information report for Os6PGDH;Os6PGDH1
Gene Details
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Functional Descriptions
- RT-PCR experiments revealed that Os6PGDH expression was high in inflorescence, low in root and embryos but almost absent in leaves.
- Furthermore, Os6PGDH was up-regulated in the shoots under salt stress.
- Levels of Os6PGDH1 transcripts were detected in all five examined tissues, with the highest in outer leaf sheaths and lowest in inner leaf sheaths.
- Taken together, these results indicate that Os6PGDH1 plays a pivotal role not only in rice growth but also in the resistance of rice to BPH by modulating JA, ethylene, and H2O2 pathways.
- In addition, the overexpression of Os6PGDH1 enhanced levels of BPH-induced JA, jasmonoyl-isoleucine (JA-Ile), and H2O2, but decreased BPH-induced levels of ethylene.
- Os6PGDH1 expression was strongly induced by mechanical wounding, infestation of gravid BPH females, and jasmonic acid (JA) treatment.
- Overexpressing Os6PGDH1 (oe6PGDH) decreased the height of rice plants and the mass of the aboveground part of plants, but slightly increased the length of plant roots.
Functional Keywords
- inflorescence , salt , shoot , root , salt-stress , leaf , growth , resistance , ethylene , jasmonic , jasmonic-acid , height
Literature and News
- Molecular cloning and characterization of rice 6-phosphogluconate dehydrogenase gene that is up-regulated by salt stress . DOI: 10.1023/a:1026392422995 ; PMID: 14672408
- Overexpression of a Cytosolic 6-Phosphogluconate Dehydrogenase Gene Enhances the Resistance of Rice to Nilaparvata lugens . DOI: 10.3390/plants9111529 ; PMID: 33182659
Gene Resources
- UniProt: Q9LI00
- EMBL: AF486280, AK065920, AP001552
- AlphaFoldDB: Q9LI00
- EnsemblPlants: Os06t0111500-01
- Gramene: Os06t0111500-01
- KEGG: dosa:Os06g0111500
- Orthologous matrix: CVTHVGP
- InterPro: IPR006113, IPR006114, IPR006115
- PANTHER: PTHR11811
- SUPFAM: SSF48179, SSF51735
- Gene3D: 1.10.1040.10, 1.20.5.320, 3.40.50.720
- OrthoDB: Q9LI00
- SWISS-MODEL: Q9LI00
- eggNOG: KOG2653
Sequences
cDNA Sequence
- >LOC_Os06g02144.2
AAGCAGGCGGTGCGGTAGGTGGTCGACTCGCTGCACGCCTTTCCGCGATTTCGTCAGTTACCCAGATCTCATCTTACGCAGGTGAGCTCCGATCTCCCCTCTCCCGCGCTGCGATTTTGATTTGATCCGTCGCGCCGCATCGCGTCGTCGCTTGGCAGAGATGGCTGTCACTAGAATTGGTCTTGCTGGCCTTGCGGTCATGGGGCAGAACCTTGCCCTCAACATTGCAGAGAAAGGGTTCCCTATCTCTGTCTACAACAGGACGACTTCTAAGGTTGATGAGACCGTTCAGCGCGCCAAGGTAGAAGGAAACCTTCCTGTGTACGGGTTCCATGACCCTGCATCCTTTGTGAACTCCATTCAGAAGCCACGTGTTGTCATCATGCTTGTCAAGGCTGGTGCACCAGTGGACCAGACCATTGCAACTCTTGCAGCACACTTGGAGCAGGGTGACTGTATTATTGATGGAGGAAATGAGTGGTACGAGAACACTGAGAGGAGGGAGAAGGCAATGGAGGAGCGTGGCCTCCTCTATCTTGGGATGGGTGTTTCCGGAGGAGAGGAGGGTGCCCGCAATGGCCCGTCCTTGATGCCTGGTGGCTCATTCGAGGCGTACAAGTACATTGAAGATATTCTTCTCAAGGTGGCTGCCCAGGTTCCTGATAGTGGCCCGTGCGTCACATACATTGGCAAAGGTGGATCTGGAAACTTTGTCAAGATGGTTCACAACGGAATTGAGTATGGTGACATGCAACTGATTTCTGAGGCATATGATGTTCTCAAGTCAGTTGGTAAGCTCACAAACAGTGAGCTGCAGCAGGTGTTTTCTGAGTGGAACAAGGGTGAGCTCCTCAGTTTCCTGATTGAGATCACAGCCGACATATTTAGCATCAAGGATGACCAGGGTTCAGGCCACCTGGTCGACAAGGTCCTGGACAAGACTGGGATGAAGGGAACTGGGAAGTGGACTGTGCAGCAGGCCGCAGAGCTTTCTGTGGCTGCTCCTACAATTGAGGCATCCTTGGATTCCAGGTTCCTCAGTGGGTTGAAGGATGAGCGTGTTGAGGCTGCCAAGGTCTTCCAAGGTGACTTCTCCAGCAACTTGCCAGTGGACAAGGCACAGCTGATTGAAGACGTGAGGCAGGCTCTTTACGCCTCGAAGATCTGCAGCTACGCTCAGGGCATGAACATCATCAAGGCCAAGAGCATGGAGAAAGGGTGGAGCCTCAACCTCGGTGAGCTAGCGAGGATCTGGAAGGGAGGGTGCATCATCCGTGCCATCTTCCTGGACCGCATCAAGAAGGCCTACGACAGGAACTCCGACCTCGCCAACCTGCTCGTGGACCCTGAGTTCGCTCAGGAGATCATGGACAGGCAAGCGGCATGGCGCAGGGTGGTCTGCCTTGCCATCAACAATGGCGTCAGCACCCCAGGCATGTCGGCGAGTCTCGCGTACTTCGACTCCTACCGGAGGGACAGGCTGCCTGCCAACCTGGTGCAGGCACAGAGGGACTATTTCGGGGCTCACACCTACGAGAGGGTCGACATGCCCGGCTCCTTCCACACCGAGTGGTTCAAGATCGCGCGTGCTGCTAAGATGTGAAATGCTTCAAATTTTCGGTAATATTTGGTTGCTGCTTGCTGCTGAGTCGCTTGTAGGGTGGGAGGAACTGTTGTTAAATTTTATGGTCAATGTGCTACGCTTAATTTGGATAAGGAGGTCCATAGCTATCTCCATTCTTTTAATGTAAGGAGCAGCCCAGGGTGGAGAGAACATGGATATTTATCATTGGAACCTTTGTTGTGATCTTTGTAAGTCTATATATGAATAAAAGCATTTTGGCAATGCTTGCTTTTTTACCCCTCATTGTGTTACAATAATCTGTACACGAAAGTTAGTATTCTTTTA - >LOC_Os06g02144.1
AAGCAGGCGGTGCGGTAGGTGGTCGACTCGCTGCACGCCTTTCCGCGATTTCGTCAGTTACCCAGATCTCATCTTACGCAGGTGAGCTCCGATCTCCCCTCTCCCGCGCTGCGATTTTGATTTGATCCGTCGCGCCGCATCGCGTCGTCGCTTGGCAGAGATGGCTGTCACTAGAATTGGTCTTGCTGGCCTTGCGGTCATGGGGCAGAACCTTGCCCTCAACATTGCAGAGAAAGGGTTCCCTATCTCTGTCTACAACAGGACGACTTCTAAGGTTGATGAGACCGTTCAGCGCGCCAAGGTAGAAGGAAACCTTCCTGTGTACGGGTTCCATGACCCTGCATCCTTTGTGAACTCCATTCAGAAGCCACGTGTTGTCATCATGCTTGTCAAGGCTGGTGCACCAGTGGACCAGACCATTGCAACTCTTGCAGCACACTTGGAGCAGGGTGACTGTATTATTGATGGAGGAAATGAGTGGTACGAGAACACTGAGAGGAGGGAGAAGGCAATGGAGGAGCGTGGCCTCCTCTATCTTGGGATGGGTGTTTCCGGAGGAGAGGAGGGTGCCCGCAATGGCCCGTCCTTGATGCCTGGTGGCTCATTCGAGGCGTACAAGTACATTGAAGATATTCTTCTCAAGGTGGCTGCCCAGGTTCCTGATAGTGGCCCGTGCGTCACATACATTGGCAAAGGTGGATCTGGAAACTTTGTCAAGATGGTTCACAACGGAATTGAGTATGGTGACATGCAACTGATTTCTGAGGCATATGATGTTCTCAAGTCAGTTGGTAAGCTCACAAACAGTGAGCTGCAGCAGGTGTTTTCTGAGTGGAACAAGGGTGAGCTCCTCAGTTTCCTGATTGAGATCACAGCCGACATATTTAGCATCAAGGATGACCAGGGTTCAGGCCACCTGGTCGACAAGGTCCTGGACAAGACTGGGATGAAGGGAACTGGGAAGTGGACTGTGCAGCAGGCCGCAGAGCTTTCTGTGGCTGCTCCTACAATTGAGGCATCCTTGGATTCCAGGTTCCTCAGTGGGTTGAAGGATGAGCGTGTTGAGGCTGCCAAGGTCTTCCAAGGTGACTTCTCCAGCAACTTGCCAGTGGACAAGGCACAGCTGATTGAAGACGTGAGGCAGGCTCTTTACGCCTCGAAGATCTGCAGCTACGCTCAGGGCATGAACATCATCAAGGCCAAGAGCATGGAGAAAGGGTGGAGCCTCAACCTCGGTGAGCTAGCGAGGATCTGGAAGGGAGGGTGCATCATCCGTGCCATCTTCCTGGACCGCATCAAGAAGGCCTACGACAGGAACTCCGACCTCGCCAACCTGCTCGTGGACCCTGAGTTCGCTCAGGAGATCATGGACAGGCAAGCGGCATGGCGCAGGGTGGTCTGCCTTGCCATCAACAATGGCGTCAGCACCCCAGGCATGTCGGCGAGTCTCGCGTACTTCGACTCCTACCGGAGGGACAGGCTGCCTGCCAACCTGGTGCAGGCACAGAGGGACTATTTCGGGGCTCACACCTACGAGAGGGTCGACATGCCCGGCTCCTTCCACACCGAGTGGTTCAAGATCGCGCGTGCTGCTAAGATGTGAAATGCTTCAAATTTTCGGTAATATTTGGTTGCTGCTTGCTGCTGAGTCGCTTGTAGGGTGGGAGGAACTGTTGTTAAATTTTATGGTCAATGTGCTACGCTTAATTTGGATAAGGAGGTCCATAGCTATCTCCATTCTTTTAATGTAAGGAGCAGCCCAGGGTGGAGAGAACATGGATATTTATCATTGGAACCTTTGTTGTGATCTTTGTAAGTCTATATATGAATAAAAGCATTTTGGCAATGCTTGCTTTTTTACCCCTCATTGTGTTACAATAATCTGTACACGAAAGTTAGTATTCTTTTA
CDS Sequence
- >LOC_Os06g02144.2
ATGGCTGTCACTAGAATTGGTCTTGCTGGCCTTGCGGTCATGGGGCAGAACCTTGCCCTCAACATTGCAGAGAAAGGGTTCCCTATCTCTGTCTACAACAGGACGACTTCTAAGGTTGATGAGACCGTTCAGCGCGCCAAGGTAGAAGGAAACCTTCCTGTGTACGGGTTCCATGACCCTGCATCCTTTGTGAACTCCATTCAGAAGCCACGTGTTGTCATCATGCTTGTCAAGGCTGGTGCACCAGTGGACCAGACCATTGCAACTCTTGCAGCACACTTGGAGCAGGGTGACTGTATTATTGATGGAGGAAATGAGTGGTACGAGAACACTGAGAGGAGGGAGAAGGCAATGGAGGAGCGTGGCCTCCTCTATCTTGGGATGGGTGTTTCCGGAGGAGAGGAGGGTGCCCGCAATGGCCCGTCCTTGATGCCTGGTGGCTCATTCGAGGCGTACAAGTACATTGAAGATATTCTTCTCAAGGTGGCTGCCCAGGTTCCTGATAGTGGCCCGTGCGTCACATACATTGGCAAAGGTGGATCTGGAAACTTTGTCAAGATGGTTCACAACGGAATTGAGTATGGTGACATGCAACTGATTTCTGAGGCATATGATGTTCTCAAGTCAGTTGGTAAGCTCACAAACAGTGAGCTGCAGCAGGTGTTTTCTGAGTGGAACAAGGGTGAGCTCCTCAGTTTCCTGATTGAGATCACAGCCGACATATTTAGCATCAAGGATGACCAGGGTTCAGGCCACCTGGTCGACAAGGTCCTGGACAAGACTGGGATGAAGGGAACTGGGAAGTGGACTGTGCAGCAGGCCGCAGAGCTTTCTGTGGCTGCTCCTACAATTGAGGCATCCTTGGATTCCAGGTTCCTCAGTGGGTTGAAGGATGAGCGTGTTGAGGCTGCCAAGGTCTTCCAAGGTGACTTCTCCAGCAACTTGCCAGTGGACAAGGCACAGCTGATTGAAGACGTGAGGCAGGCTCTTTACGCCTCGAAGATCTGCAGCTACGCTCAGGGCATGAACATCATCAAGGCCAAGAGCATGGAGAAAGGGTGGAGCCTCAACCTCGGTGAGCTAGCGAGGATCTGGAAGGGAGGGTGCATCATCCGTGCCATCTTCCTGGACCGCATCAAGAAGGCCTACGACAGGAACTCCGACCTCGCCAACCTGCTCGTGGACCCTGAGTTCGCTCAGGAGATCATGGACAGGCAAGCGGCATGGCGCAGGGTGGTCTGCCTTGCCATCAACAATGGCGTCAGCACCCCAGGCATGTCGGCGAGTCTCGCGTACTTCGACTCCTACCGGAGGGACAGGCTGCCTGCCAACCTGGTGCAGGCACAGAGGGACTATTTCGGGGCTCACACCTACGAGAGGGTCGACATGCCCGGCTCCTTCCACACCGAGTGGTTCAAGATCGCGCGTGCTGCTAAGATGTGA - >LOC_Os06g02144.1
ATGGCTGTCACTAGAATTGGTCTTGCTGGCCTTGCGGTCATGGGGCAGAACCTTGCCCTCAACATTGCAGAGAAAGGGTTCCCTATCTCTGTCTACAACAGGACGACTTCTAAGGTTGATGAGACCGTTCAGCGCGCCAAGGTAGAAGGAAACCTTCCTGTGTACGGGTTCCATGACCCTGCATCCTTTGTGAACTCCATTCAGAAGCCACGTGTTGTCATCATGCTTGTCAAGGCTGGTGCACCAGTGGACCAGACCATTGCAACTCTTGCAGCACACTTGGAGCAGGGTGACTGTATTATTGATGGAGGAAATGAGTGGTACGAGAACACTGAGAGGAGGGAGAAGGCAATGGAGGAGCGTGGCCTCCTCTATCTTGGGATGGGTGTTTCCGGAGGAGAGGAGGGTGCCCGCAATGGCCCGTCCTTGATGCCTGGTGGCTCATTCGAGGCGTACAAGTACATTGAAGATATTCTTCTCAAGGTGGCTGCCCAGGTTCCTGATAGTGGCCCGTGCGTCACATACATTGGCAAAGGTGGATCTGGAAACTTTGTCAAGATGGTTCACAACGGAATTGAGTATGGTGACATGCAACTGATTTCTGAGGCATATGATGTTCTCAAGTCAGTTGGTAAGCTCACAAACAGTGAGCTGCAGCAGGTGTTTTCTGAGTGGAACAAGGGTGAGCTCCTCAGTTTCCTGATTGAGATCACAGCCGACATATTTAGCATCAAGGATGACCAGGGTTCAGGCCACCTGGTCGACAAGGTCCTGGACAAGACTGGGATGAAGGGAACTGGGAAGTGGACTGTGCAGCAGGCCGCAGAGCTTTCTGTGGCTGCTCCTACAATTGAGGCATCCTTGGATTCCAGGTTCCTCAGTGGGTTGAAGGATGAGCGTGTTGAGGCTGCCAAGGTCTTCCAAGGTGACTTCTCCAGCAACTTGCCAGTGGACAAGGCACAGCTGATTGAAGACGTGAGGCAGGCTCTTTACGCCTCGAAGATCTGCAGCTACGCTCAGGGCATGAACATCATCAAGGCCAAGAGCATGGAGAAAGGGTGGAGCCTCAACCTCGGTGAGCTAGCGAGGATCTGGAAGGGAGGGTGCATCATCCGTGCCATCTTCCTGGACCGCATCAAGAAGGCCTACGACAGGAACTCCGACCTCGCCAACCTGCTCGTGGACCCTGAGTTCGCTCAGGAGATCATGGACAGGCAAGCGGCATGGCGCAGGGTGGTCTGCCTTGCCATCAACAATGGCGTCAGCACCCCAGGCATGTCGGCGAGTCTCGCGTACTTCGACTCCTACCGGAGGGACAGGCTGCCTGCCAACCTGGTGCAGGCACAGAGGGACTATTTCGGGGCTCACACCTACGAGAGGGTCGACATGCCCGGCTCCTTCCACACCGAGTGGTTCAAGATCGCGCGTGCTGCTAAGATGTGA
Protein Sequence
- >LOC_Os06g02144.2
MAVTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFVNSIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEEGARNGPSLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNFVKMVHNGIEYGDMQLISEAYDVLKSVGKLTNSELQQVFSEWNKGELLSFLIEITADIFSIKDDQGSGHLVDKVLDKTGMKGTGKWTVQQAAELSVAAPTIEASLDSRFLSGLKDERVEAAKVFQGDFSSNLPVDKAQLIEDVRQALYASKICSYAQGMNIIKAKSMEKGWSLNLGELARIWKGGCIIRAIFLDRIKKAYDRNSDLANLLVDPEFAQEIMDRQAAWRRVVCLAINNGVSTPGMSASLAYFDSYRRDRLPANLVQAQRDYFGAHTYERVDMPGSFHTEWFKIARAAKM* - >LOC_Os06g02144.1
MAVTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPASFVNSIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERGLLYLGMGVSGGEEGARNGPSLMPGGSFEAYKYIEDILLKVAAQVPDSGPCVTYIGKGGSGNFVKMVHNGIEYGDMQLISEAYDVLKSVGKLTNSELQQVFSEWNKGELLSFLIEITADIFSIKDDQGSGHLVDKVLDKTGMKGTGKWTVQQAAELSVAAPTIEASLDSRFLSGLKDERVEAAKVFQGDFSSNLPVDKAQLIEDVRQALYASKICSYAQGMNIIKAKSMEKGWSLNLGELARIWKGGCIIRAIFLDRIKKAYDRNSDLANLLVDPEFAQEIMDRQAAWRRVVCLAINNGVSTPGMSASLAYFDSYRRDRLPANLVQAQRDYFGAHTYERVDMPGSFHTEWFKIARAAKM*