Gene Details:
- MSU gene ID: LOC_Os06g01620
- RAPdb gene ID: Os06g0105350
- Gene Symbol: OsHAM4 SCL6-I
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Our findings indicate that osa-miR171 plays a role in drought tolerance by regulating SCL6-I and SCL6-II transcript levels.
Function-related keywords:
Literature:
- Rice osa-miR171c Mediates Phase Change from Vegetative to Reproductive Development and Shoot Apical Meristem Maintenance by Repressing Four OsHAM Transcription Factors . DOI: 10.1371/journal.pone.0125833 ; PMID: 26023934
- Rice microRNA171f/SCL6 module enhances drought tolerance by regulation of flavonoid biosynthesis genes . DOI: 10.1002/pld3.374 ; PMID: 35028494
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os06g01620.1
ATCAATATTGCCCTCATGTCCTCCTCCTCTTGCCATCCCCACAACCCCACCACCCTGCCGCTGCCGGAGCCGGACAGCAGCAAGTCGCCGGAGCCCACCTCCGTGCTCTACAACCGCAGCAGCCCGAGCACCTCCCTCGGCTCCTGCTCCTCCAAACCACCGGAGGACCCTCCTCCCCCCATCGCCGCCGACGACGACTGCGACTGGGACGCCGTCGTCGACATGCACATGCACATGCTCGCCCCCGCCCCCGCCCCCGACTCCTCCTTCCTCCGCTGGATCATGGATACCGGCTATGCCGACGCCGACACCTTTCCCGACCACCCCTCCTTCGACTCCGACCTGCTCCAACTCCCCATGCCCATGCCCTCTGACCATCCTCCTCAGCCGCTCGTCGACGACCTCCTCGACGCCGCACGCCTCCTCGACGCCGGGGACTCCACTTCCGCTAGGGAGATATTGGCGCGGCTCAATCATCGCCTCCCCTCTCTTCCGTCGCCTCCGGGCCATGCCCACCCTCCGCTCCTCCGCGCCGCCGCCCTCCTCCGGGACGCGCTCCTCCCGCCCACCGCCCTCCCCGTCTCCTCTACTCCCCTCGACGTCCCGCTCAAGCTCGCCGCGCACAAGGCCCTGGCGGACGCCTCCCCGACCGTGCAGTTCACCACCTTCACATCCACGCAGGCCTTCCTCGACGCGCTCGGCTCCGCGCGCCGCCTCCACCTCCTCGACTTCGACGTCGGCTTCGGTGCCCATTGGCCGCCTCTCATGCAGGAGCTCGCGCACCACTGGCGCCGCGCTGCTGGGCCGCCGCCGAACCTCAAGGTGACCGCATTGGTGTCGCCGGGGTCCAGCCACCCACTCGAGCTCCACCTCACCAACGAGAGCCTCACGCGCTTCGCCGCCGAGCTCGGCATCCCGTTCGAGTTCACCGCCCTCGTGTTCGACCCCCTCAGCAGCGCGTCCCCGCCCTTGGGACTCTCGGCCGCGCCCGACGAAGCGGTGGCCGTCCATCTCACGGCCGGCTCCGGGGCCTTCTCGCCGGCGCCCGCGCACCTCCGTGTCGTGAAGGAGCTCCGCCCCGCCGTTGTGGTGTGCGTCGACCACGGGTGCGAGCGCGGCGCCCTCAACCTCCTGCAGTCTTGCGCGGCGCTGCTGGAGTCTCTGGACGCGGCGGGCGCGTCGCCGGACGTGGTGTCCAAGGTGGAGCAGTTCGTCCTGCGGCCACGGGTGGAGCGCCTCGCGGTCGGCGGCGGCGACAAGCTGCCTCCGCCGTTGCAGTCCATGTTGGCGTCCGCGGGGTTTGCGGCGCTGCAGGTGAGCAATGCGGCGGAGGCGCAGGCGGAATGCCTGCTGAGGCGCACGGCCAGCCATGGGTTCCATGTGGAGAAGCGGCAGGCGGCGCTGGCGCTGTGGTGGCAGCGGTCGGAGCTCGTCTCGGTGTCAGCGTGGCGATGCTAGCTGCCTCTGCCTGGTACACTTGTACTACAAATGTTTGGTGTTCATTGATCTTGAATATTTTCAGCTTTGGGTAAATTGATCAAACCAAAGCTGCTTGTGATATGTTAGCACTAGTAGTAGTAATTGGGTAATTATTTCTTGCCTGGGAGAATTCATGCTCCATGGCATGCTTGTACAATTTGTATGGCAATGACAAAATTGGGAGTGCTCAAGAGTGCAAGCCCCCAACCTTGTGATTCAACTGTTCATAACCGCACGTCTTTCTTTTGTGCACATCTCTGATCTAATATACAGAGTAGTTCTCTTTT
CDS Sequence
- >LOC_Os06g01620.1
ATGTCCTCCTCCTCTTGCCATCCCCACAACCCCACCACCCTGCCGCTGCCGGAGCCGGACAGCAGCAAGTCGCCGGAGCCCACCTCCGTGCTCTACAACCGCAGCAGCCCGAGCACCTCCCTCGGCTCCTGCTCCTCCAAACCACCGGAGGACCCTCCTCCCCCCATCGCCGCCGACGACGACTGCGACTGGGACGCCGTCGTCGACATGCACATGCACATGCTCGCCCCCGCCCCCGCCCCCGACTCCTCCTTCCTCCGCTGGATCATGGATACCGGCTATGCCGACGCCGACACCTTTCCCGACCACCCCTCCTTCGACTCCGACCTGCTCCAACTCCCCATGCCCATGCCCTCTGACCATCCTCCTCAGCCGCTCGTCGACGACCTCCTCGACGCCGCACGCCTCCTCGACGCCGGGGACTCCACTTCCGCTAGGGAGATATTGGCGCGGCTCAATCATCGCCTCCCCTCTCTTCCGTCGCCTCCGGGCCATGCCCACCCTCCGCTCCTCCGCGCCGCCGCCCTCCTCCGGGACGCGCTCCTCCCGCCCACCGCCCTCCCCGTCTCCTCTACTCCCCTCGACGTCCCGCTCAAGCTCGCCGCGCACAAGGCCCTGGCGGACGCCTCCCCGACCGTGCAGTTCACCACCTTCACATCCACGCAGGCCTTCCTCGACGCGCTCGGCTCCGCGCGCCGCCTCCACCTCCTCGACTTCGACGTCGGCTTCGGTGCCCATTGGCCGCCTCTCATGCAGGAGCTCGCGCACCACTGGCGCCGCGCTGCTGGGCCGCCGCCGAACCTCAAGGTGACCGCATTGGTGTCGCCGGGGTCCAGCCACCCACTCGAGCTCCACCTCACCAACGAGAGCCTCACGCGCTTCGCCGCCGAGCTCGGCATCCCGTTCGAGTTCACCGCCCTCGTGTTCGACCCCCTCAGCAGCGCGTCCCCGCCCTTGGGACTCTCGGCCGCGCCCGACGAAGCGGTGGCCGTCCATCTCACGGCCGGCTCCGGGGCCTTCTCGCCGGCGCCCGCGCACCTCCGTGTCGTGAAGGAGCTCCGCCCCGCCGTTGTGGTGTGCGTCGACCACGGGTGCGAGCGCGGCGCCCTCAACCTCCTGCAGTCTTGCGCGGCGCTGCTGGAGTCTCTGGACGCGGCGGGCGCGTCGCCGGACGTGGTGTCCAAGGTGGAGCAGTTCGTCCTGCGGCCACGGGTGGAGCGCCTCGCGGTCGGCGGCGGCGACAAGCTGCCTCCGCCGTTGCAGTCCATGTTGGCGTCCGCGGGGTTTGCGGCGCTGCAGGTGAGCAATGCGGCGGAGGCGCAGGCGGAATGCCTGCTGAGGCGCACGGCCAGCCATGGGTTCCATGTGGAGAAGCGGCAGGCGGCGCTGGCGCTGTGGTGGCAGCGGTCGGAGCTCGTCTCGGTGTCAGCGTGGCGATGCTAG
Protein Sequence
- >LOC_Os06g01620.1
MSSSSCHPHNPTTLPLPEPDSSKSPEPTSVLYNRSSPSTSLGSCSSKPPEDPPPPIAADDDCDWDAVVDMHMHMLAPAPAPDSSFLRWIMDTGYADADTFPDHPSFDSDLLQLPMPMPSDHPPQPLVDDLLDAARLLDAGDSTSAREILARLNHRLPSLPSPPGHAHPPLLRAAALLRDALLPPTALPVSSTPLDVPLKLAAHKALADASPTVQFTTFTSTQAFLDALGSARRLHLLDFDVGFGAHWPPLMQELAHHWRRAAGPPPNLKVTALVSPGSSHPLELHLTNESLTRFAAELGIPFEFTALVFDPLSSASPPLGLSAAPDEAVAVHLTAGSGAFSPAPAHLRVVKELRPAVVVCVDHGCERGALNLLQSCAALLESLDAAGASPDVVSKVEQFVLRPRVERLAVGGGDKLPPPLQSMLASAGFAALQVSNAAEAQAECLLRRTASHGFHVEKRQAALALWWQRSELVSVSAWRC*