Information report for OsHAM4;SCL6-I
Gene Details
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Functional Descriptions
- Our findings indicate that osa-miR171 plays a role in drought tolerance by regulating SCL6-I and SCL6-II transcript levels.
Functional Keywords
Literature and News
- Rice osa-miR171c Mediates Phase Change from Vegetative to Reproductive Development and Shoot Apical Meristem Maintenance by Repressing Four OsHAM Transcription Factors . DOI: 10.1371/journal.pone.0125833 ; PMID: 26023934
- Rice microRNA171f/SCL6 module enhances drought tolerance by regulation of flavonoid biosynthesis genes . DOI: 10.1002/pld3.374 ; PMID: 35028494
Gene Resources
- UniProt: A3B7K4
- EMBL: CM000143
- AlphaFoldDB: A3B7K4
- EnsemblPlants: Os06t0105350-01
- Gramene: Os06t0105350-01
Sequences
cDNA Sequence
- >LOC_Os06g01620.1
ATCAATATTGCCCTCATGTCCTCCTCCTCTTGCCATCCCCACAACCCCACCACCCTGCCGCTGCCGGAGCCGGACAGCAGCAAGTCGCCGGAGCCCACCTCCGTGCTCTACAACCGCAGCAGCCCGAGCACCTCCCTCGGCTCCTGCTCCTCCAAACCACCGGAGGACCCTCCTCCCCCCATCGCCGCCGACGACGACTGCGACTGGGACGCCGTCGTCGACATGCACATGCACATGCTCGCCCCCGCCCCCGCCCCCGACTCCTCCTTCCTCCGCTGGATCATGGATACCGGCTATGCCGACGCCGACACCTTTCCCGACCACCCCTCCTTCGACTCCGACCTGCTCCAACTCCCCATGCCCATGCCCTCTGACCATCCTCCTCAGCCGCTCGTCGACGACCTCCTCGACGCCGCACGCCTCCTCGACGCCGGGGACTCCACTTCCGCTAGGGAGATATTGGCGCGGCTCAATCATCGCCTCCCCTCTCTTCCGTCGCCTCCGGGCCATGCCCACCCTCCGCTCCTCCGCGCCGCCGCCCTCCTCCGGGACGCGCTCCTCCCGCCCACCGCCCTCCCCGTCTCCTCTACTCCCCTCGACGTCCCGCTCAAGCTCGCCGCGCACAAGGCCCTGGCGGACGCCTCCCCGACCGTGCAGTTCACCACCTTCACATCCACGCAGGCCTTCCTCGACGCGCTCGGCTCCGCGCGCCGCCTCCACCTCCTCGACTTCGACGTCGGCTTCGGTGCCCATTGGCCGCCTCTCATGCAGGAGCTCGCGCACCACTGGCGCCGCGCTGCTGGGCCGCCGCCGAACCTCAAGGTGACCGCATTGGTGTCGCCGGGGTCCAGCCACCCACTCGAGCTCCACCTCACCAACGAGAGCCTCACGCGCTTCGCCGCCGAGCTCGGCATCCCGTTCGAGTTCACCGCCCTCGTGTTCGACCCCCTCAGCAGCGCGTCCCCGCCCTTGGGACTCTCGGCCGCGCCCGACGAAGCGGTGGCCGTCCATCTCACGGCCGGCTCCGGGGCCTTCTCGCCGGCGCCCGCGCACCTCCGTGTCGTGAAGGAGCTCCGCCCCGCCGTTGTGGTGTGCGTCGACCACGGGTGCGAGCGCGGCGCCCTCAACCTCCTGCAGTCTTGCGCGGCGCTGCTGGAGTCTCTGGACGCGGCGGGCGCGTCGCCGGACGTGGTGTCCAAGGTGGAGCAGTTCGTCCTGCGGCCACGGGTGGAGCGCCTCGCGGTCGGCGGCGGCGACAAGCTGCCTCCGCCGTTGCAGTCCATGTTGGCGTCCGCGGGGTTTGCGGCGCTGCAGGTGAGCAATGCGGCGGAGGCGCAGGCGGAATGCCTGCTGAGGCGCACGGCCAGCCATGGGTTCCATGTGGAGAAGCGGCAGGCGGCGCTGGCGCTGTGGTGGCAGCGGTCGGAGCTCGTCTCGGTGTCAGCGTGGCGATGCTAGCTGCCTCTGCCTGGTACACTTGTACTACAAATGTTTGGTGTTCATTGATCTTGAATATTTTCAGCTTTGGGTAAATTGATCAAACCAAAGCTGCTTGTGATATGTTAGCACTAGTAGTAGTAATTGGGTAATTATTTCTTGCCTGGGAGAATTCATGCTCCATGGCATGCTTGTACAATTTGTATGGCAATGACAAAATTGGGAGTGCTCAAGAGTGCAAGCCCCCAACCTTGTGATTCAACTGTTCATAACCGCACGTCTTTCTTTTGTGCACATCTCTGATCTAATATACAGAGTAGTTCTCTTTT
CDS Sequence
- >LOC_Os06g01620.1
ATGTCCTCCTCCTCTTGCCATCCCCACAACCCCACCACCCTGCCGCTGCCGGAGCCGGACAGCAGCAAGTCGCCGGAGCCCACCTCCGTGCTCTACAACCGCAGCAGCCCGAGCACCTCCCTCGGCTCCTGCTCCTCCAAACCACCGGAGGACCCTCCTCCCCCCATCGCCGCCGACGACGACTGCGACTGGGACGCCGTCGTCGACATGCACATGCACATGCTCGCCCCCGCCCCCGCCCCCGACTCCTCCTTCCTCCGCTGGATCATGGATACCGGCTATGCCGACGCCGACACCTTTCCCGACCACCCCTCCTTCGACTCCGACCTGCTCCAACTCCCCATGCCCATGCCCTCTGACCATCCTCCTCAGCCGCTCGTCGACGACCTCCTCGACGCCGCACGCCTCCTCGACGCCGGGGACTCCACTTCCGCTAGGGAGATATTGGCGCGGCTCAATCATCGCCTCCCCTCTCTTCCGTCGCCTCCGGGCCATGCCCACCCTCCGCTCCTCCGCGCCGCCGCCCTCCTCCGGGACGCGCTCCTCCCGCCCACCGCCCTCCCCGTCTCCTCTACTCCCCTCGACGTCCCGCTCAAGCTCGCCGCGCACAAGGCCCTGGCGGACGCCTCCCCGACCGTGCAGTTCACCACCTTCACATCCACGCAGGCCTTCCTCGACGCGCTCGGCTCCGCGCGCCGCCTCCACCTCCTCGACTTCGACGTCGGCTTCGGTGCCCATTGGCCGCCTCTCATGCAGGAGCTCGCGCACCACTGGCGCCGCGCTGCTGGGCCGCCGCCGAACCTCAAGGTGACCGCATTGGTGTCGCCGGGGTCCAGCCACCCACTCGAGCTCCACCTCACCAACGAGAGCCTCACGCGCTTCGCCGCCGAGCTCGGCATCCCGTTCGAGTTCACCGCCCTCGTGTTCGACCCCCTCAGCAGCGCGTCCCCGCCCTTGGGACTCTCGGCCGCGCCCGACGAAGCGGTGGCCGTCCATCTCACGGCCGGCTCCGGGGCCTTCTCGCCGGCGCCCGCGCACCTCCGTGTCGTGAAGGAGCTCCGCCCCGCCGTTGTGGTGTGCGTCGACCACGGGTGCGAGCGCGGCGCCCTCAACCTCCTGCAGTCTTGCGCGGCGCTGCTGGAGTCTCTGGACGCGGCGGGCGCGTCGCCGGACGTGGTGTCCAAGGTGGAGCAGTTCGTCCTGCGGCCACGGGTGGAGCGCCTCGCGGTCGGCGGCGGCGACAAGCTGCCTCCGCCGTTGCAGTCCATGTTGGCGTCCGCGGGGTTTGCGGCGCTGCAGGTGAGCAATGCGGCGGAGGCGCAGGCGGAATGCCTGCTGAGGCGCACGGCCAGCCATGGGTTCCATGTGGAGAAGCGGCAGGCGGCGCTGGCGCTGTGGTGGCAGCGGTCGGAGCTCGTCTCGGTGTCAGCGTGGCGATGCTAG
Protein Sequence
- >LOC_Os06g01620.1
MSSSSCHPHNPTTLPLPEPDSSKSPEPTSVLYNRSSPSTSLGSCSSKPPEDPPPPIAADDDCDWDAVVDMHMHMLAPAPAPDSSFLRWIMDTGYADADTFPDHPSFDSDLLQLPMPMPSDHPPQPLVDDLLDAARLLDAGDSTSAREILARLNHRLPSLPSPPGHAHPPLLRAAALLRDALLPPTALPVSSTPLDVPLKLAAHKALADASPTVQFTTFTSTQAFLDALGSARRLHLLDFDVGFGAHWPPLMQELAHHWRRAAGPPPNLKVTALVSPGSSHPLELHLTNESLTRFAAELGIPFEFTALVFDPLSSASPPLGLSAAPDEAVAVHLTAGSGAFSPAPAHLRVVKELRPAVVVCVDHGCERGALNLLQSCAALLESLDAAGASPDVVSKVEQFVLRPRVERLAVGGGDKLPPPLQSMLASAGFAALQVSNAAEAQAECLLRRTASHGFHVEKRQAALALWWQRSELVSVSAWRC*