Gene Details:
- MSU gene ID: LOC_Os05g51670
- RAPdb gene ID: Os05g0595100
- Gene Symbol: OsUGE1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsUGE1 is directly targeted by OsGRF6 to regulate root hair length in rice.
- Here, we report a novel mechanism that OsUGE1 is negatively controlled by OsGRF6 to regulate root hair elongation in rice.
- Knockout mutants of OsUGE1 using CRISPR-Cas9 technology showed longer root hairs than those of wild type.
- In contrast, overexpression lines of OsUGE1 displayed shorter root hair compared with those of wild type.
- Taken together, our study reveals a novel pathway that OsUGE1 is negatively controlled by OsGRF6 to regulate root hair elongation in rice.
- Subcellular localization analysis indicates that OsUGE1 is located in endoplasmic reticulum, nucleus and plasma membrane.
- Collectively, our results indicate that OsUGE1 not only functions as a UDP-glucose epimerase but also moonlights as a transcriptional activator to promote tapetum degradation, revealing a novel regulatory mechanism of rice reproductive development.
- Interestingly, we discovered that OsUGE1 participates in the TIP2/bHLH142-TDR-EAT1/DTD transcriptional regulatory cascade involved in tapetum degradation, in which TIP2 and TDR regulate the expression of OsUGE1 while OsUGE1 regulates the expression of EAT1.
Function-related keywords:
- root , nucleus , plasma-membrane , root-hair , development , tapetum , reproductive , reproductive-development , transcriptional-regulator , transcriptional-activator , tapetum-degradation
Literature:
- OsUGE1 is directly targeted by OsGRF6 to regulate root hair length in rice . DOI: 10.1007/s00122-023-04356-4 ; PMID: 37039968
- UDP-glucose epimerase 1, moonlighting as a transcriptional activator, is essential for tapetum degradation and male fertility in rice . DOI: 10.1016/j.molp.2023.03.008 ; PMID: 36926693
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g51670.2
ACAAACACAAATTAACCTCCTCCTCTTCTTCTTCTTCCGCTCTCTAGCTTTGCTTTGCTTGCTTCATCAAACCCCACACACGCACACAACAACAACAAGAGTAATCAAAGTAGAAGAAGATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACAAAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGTAAGTATCAGGATATATATATATATATAGCATCTCACATCATTTCATCTGTACTGTAATGAAATGAAATATTAAAATCATCATGTA - >LOC_Os05g51670.1
ACAAACACAAATTAACCTCCTCCTCTTCTTCTTCTTCCGCTCTCTAGCTTTGCTTTGCTTGCTTCATCAAACCCCACACACGCACACAACAACAACAAGAGTAATCAAAGTAGAAGAAGATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACAAAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGTAAGTATCAGGATATATATATATATATAGCATCTCACATCATTTCATCTGTACTGTAATGAAATGAAATATTAAAATCATCATGTA - >LOC_Os05g51670.3
ACAAACACAAATTAACCTCCTCCTCTTCTTCTTCTTCCGCTCTCTAGCTTTGCTTTGCTTGCTTCATCAAACCCCACACACGCACACAACAACAACAAGAGTAATCAAAGTAGAAGAAGATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACAAAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGTAAGTATCAGGATATATATATATATATAGCATCTCACATCATTTCATCTGTACTGTAATGAAATGAAATATTAAAATCATCATGTA
CDS Sequence
- >LOC_Os05g51670.2
ATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACAAAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGTAA - >LOC_Os05g51670.1
ATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACAAAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGTAA - >LOC_Os05g51670.3
ATGGTTTCGGCCTTGTTGCGGACGATCCTGGTGACGGGCGGCGCCGGCTACATCGGCAGCCACACCGTCCTCCAGCTTCTCCAACTCGGCTTCCGCGTTGTCGTCCTCGACAACCTCGACAACGCCTCCGAGCTCGCCATCCTCCGCGTCAGGGAACTCGCCGGACACAACGCCAACAACCTCGACTTCCGCAAGGTTGACCTCCGCGACAAGCAAGCGTTGGACCAAATCTTCTCCTCTCAAAGGTTTGAGGCTGTCATCCATTTTGCCGGGCTGAAAGCTGTTGGCGAGAGCGTGCAGAAGCCCCTGCTTTACTACGACAACAACCTCATCGGCACCATCACTCTCCTGCAGGTCATGGCCGCACATGGCTGCACCAAGCTGGTGTTCTCATCATCCGCAACTGTCTACGGGTGGCCCAAGGAGGTGCCCTGCACTGAAGAATCCCCACTTTGTGCAATGAACCCCTACGGCAGAACAAAGCTGGTAATCGAAGACATGTGCCGGGATCTGCATGCCTCAGACCCAAACTGGAAGATCATACTGCTCCGATACTTCAACCCTGTTGGAGCTCACCCAAGCGGGTACATTGGTGAGGACCCCTGCGGCATCCCAAACAACCTCATGCCCTTCGTCCAGCAGGTCGCTGTTGGCAGGAGGCCGGCCCTTACCGTCTATGGAACCGACTACAACACCAAGGATGGAACTGGGGTTCGTGACTATATCCATGTTGTTGATCTAGCGGATGGTCATATCGCCGCGTTAAGGAAGCTCTATGAAGATTCTGATAGAATAGGATGTGAGGTGTACAATCTGGGCACTGGAAAGGGGACATCTGTGCTGGAAATGGTTGCAGCATTCGAGAAAGCTTCTGGAAAGAAAATCCCGCTTGTATTTGCTGGACGAAGGCCTGGAGATGCCGAGATCGTTTACGCTCAAACTGCCAAAGCTGAGAAGGAACTGAAATGGAAGTAA
Protein Sequence
- >LOC_Os05g51670.2
MVSALLRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRKVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCTKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWK* - >LOC_Os05g51670.1
MVSALLRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRKVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCTKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWK* - >LOC_Os05g51670.3
MVSALLRTILVTGGAGYIGSHTVLQLLQLGFRVVVLDNLDNASELAILRVRELAGHNANNLDFRKVDLRDKQALDQIFSSQRFEAVIHFAGLKAVGESVQKPLLYYDNNLIGTITLLQVMAAHGCTKLVFSSSATVYGWPKEVPCTEESPLCAMNPYGRTKLVIEDMCRDLHASDPNWKIILLRYFNPVGAHPSGYIGEDPCGIPNNLMPFVQQVAVGRRPALTVYGTDYNTKDGTGVRDYIHVVDLADGHIAALRKLYEDSDRIGCEVYNLGTGKGTSVLEMVAAFEKASGKKIPLVFAGRRPGDAEIVYAQTAKAEKELKWK*