Information report for OsClpR1
Gene Details
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Functional Descriptions
- Plastid caseinolytic protease OsClpR1 regulates chloroplast development and chloroplast RNA editing in rice.
- The OsClpR1 mutation affected the transcript levels of chlorophyll biosynthesis and chloroplast development-related genes.
Functional Keywords
Literature and News
Gene Resources
- UniProt: Q6L4S1
- EMBL: AK071333, AP014961
- AlphaFoldDB: Q6L4S1
- EnsemblPlants: Os05t0592100-01
- Gramene: Os05t0592100-01
- KEGG: osa:4339792
- Orthologous matrix: RYSMSVS
- InterPro: IPR001907, IPR023562, IPR029045
- PANTHER: PTHR10381, PTHR10381:SF55
- SUPFAM: SSF52096
- Gene3D: 3.90.226.10
- OrthoDB: Q6L4S1
- SWISS-MODEL: Q6L4S1
- Conserved Domain Database: cd07017
- eggNOG: KOG0840
Sequences
cDNA Sequence
- >LOC_Os05g51450.1
GAGCTATCCAAATCCCAGTGAAGCGAAGGCCACCAATCCTCTTCTTCCTCTCCGGCCGCCTCCTTCCTCACCATGGCGCTCGCGCTGCGCTGCCCCGCCGCTGCCTCGCCGTCGCCAGCCAAGAGCACCTTCCCGCCCTCCTCCTCCCCGCCGCCGTCGAGGCTCCCGAGGAGGCCGCCCGCCAGCTGCAGGTGCTACTACTACGGCGACGGCGGTGGCTTCCGCAAGAACTACGACCACATCCCCAAGCAGTTCCGCGAGGAGAACCTCAAAGATGGCCTGATGGATAATTACAAGAATGTTCCTCAATTCCTTTATGGCTTAAGCCCTGCTCAGATCGAAATGTTTATGAACGATGATAATCCATATGATCGGCAATCACAGAGAGTTACAGAGGAAAGCATTTCTGCTTCTAGGAGCTATGATGAATTTGGCATGTACAACTTGTCCGGTATGCATGAGGGCCCTGCAGGTTACAGCATGGGTATGGGAATGGGCACCATGAGCATGGGCAGGGCAGGGCGAGGATATAGAAGAATGAGAAGTTCAGCTCCAGATCTGCCATCATTGCTATTGGACTCTCGAATTATATTCCTTGGAATGCCTATTGTTCCAGCAGTAACAGAGCTTATTGCTGCGCAATTTCTGTGGCTAGATTATGATGACCGCACCAAGCCAATTTACTTGTATATAAACTCCACAGGAACCATGGATGAAAACAATGAGCTGGTTGCATCTGAAACTGATGCATTTGCAATTGCTGATTTTATCAATCGAAGCAAATCCAAGGTCTACACAATCAATCTTAGCATGGCATATGGTCAGGCTGCAATGCTTCTGTCCCTTGGCGTCAAGGGTAAAAGAGGAGTGCTACCAAATTCAATCACTAAACTGTACCTGCCTAAGGTCCACAAATCTGGTGGAGCTGCTATTGACATGTGGATTAAGGCAAAAGAGTTAGACACGAACACGGATTACTACCTTGAACTGTTGTCAAAAGGAGTTGGAAAACCAAAGGAAGAGCTCGCAGAGTTTCTCAAAGGTCCAAGGTACTTCCGTGCGCAGGAGGCCATCGATTATGGGCTTGCAGATACAATCTTGCACTCTTTGGATGGTTCCTTCAAACCAAAGGATCTGACCGCGCAGTTGGCCAAAGCACAGGAGATGCGGCAATCGGGGAAGCGCCCAGCAGCTGGAGCTGGGCGATGGTCAACTCCAAGTGTCCCTAGATAGACTAGAACGTCAGATCAAAACCATACACTAGCTTAATATCGACGATGATACGCGTGGTTGTCCTATTCAGAGCAGCCTACCTGTTACATTTGCATGCAAGAAGAAATCCTGTCAGGGTTTGGAATAGATTCAGGCTGACGAAAACGTTGCTTACTGCAGTGGCTTTTGTGTTATTGGGTCATCTATGAATACGATGAATATGTAGTTTATGCTGCCTTCCTGCCAAGGTTGTTGTATTTTTCAGATAGAATTCACTAGTGGAGATGGTAATCCAGTAATCCATGTGACCAAGTATTCTTCTTATTCATGTGTTGGCTCTGCATGATGCACACCACTGCTTAATCGTGACGGTGAAACACAGACGAACTCATGCAATGCAGTGCGTTTTTTTGTGTTTGACTGTATACATATGGTAGTTGAATCAAATATATTCCTTGCAAATTT
CDS Sequence
- >LOC_Os05g51450.1
ATGGCGCTCGCGCTGCGCTGCCCCGCCGCTGCCTCGCCGTCGCCAGCCAAGAGCACCTTCCCGCCCTCCTCCTCCCCGCCGCCGTCGAGGCTCCCGAGGAGGCCGCCCGCCAGCTGCAGGTGCTACTACTACGGCGACGGCGGTGGCTTCCGCAAGAACTACGACCACATCCCCAAGCAGTTCCGCGAGGAGAACCTCAAAGATGGCCTGATGGATAATTACAAGAATGTTCCTCAATTCCTTTATGGCTTAAGCCCTGCTCAGATCGAAATGTTTATGAACGATGATAATCCATATGATCGGCAATCACAGAGAGTTACAGAGGAAAGCATTTCTGCTTCTAGGAGCTATGATGAATTTGGCATGTACAACTTGTCCGGTATGCATGAGGGCCCTGCAGGTTACAGCATGGGTATGGGAATGGGCACCATGAGCATGGGCAGGGCAGGGCGAGGATATAGAAGAATGAGAAGTTCAGCTCCAGATCTGCCATCATTGCTATTGGACTCTCGAATTATATTCCTTGGAATGCCTATTGTTCCAGCAGTAACAGAGCTTATTGCTGCGCAATTTCTGTGGCTAGATTATGATGACCGCACCAAGCCAATTTACTTGTATATAAACTCCACAGGAACCATGGATGAAAACAATGAGCTGGTTGCATCTGAAACTGATGCATTTGCAATTGCTGATTTTATCAATCGAAGCAAATCCAAGGTCTACACAATCAATCTTAGCATGGCATATGGTCAGGCTGCAATGCTTCTGTCCCTTGGCGTCAAGGGTAAAAGAGGAGTGCTACCAAATTCAATCACTAAACTGTACCTGCCTAAGGTCCACAAATCTGGTGGAGCTGCTATTGACATGTGGATTAAGGCAAAAGAGTTAGACACGAACACGGATTACTACCTTGAACTGTTGTCAAAAGGAGTTGGAAAACCAAAGGAAGAGCTCGCAGAGTTTCTCAAAGGTCCAAGGTACTTCCGTGCGCAGGAGGCCATCGATTATGGGCTTGCAGATACAATCTTGCACTCTTTGGATGGTTCCTTCAAACCAAAGGATCTGACCGCGCAGTTGGCCAAAGCACAGGAGATGCGGCAATCGGGGAAGCGCCCAGCAGCTGGAGCTGGGCGATGGTCAACTCCAAGTGTCCCTAGATAG
Protein Sequence
- >LOC_Os05g51450.1
MALALRCPAAASPSPAKSTFPPSSSPPPSRLPRRPPASCRCYYYGDGGGFRKNYDHIPKQFREENLKDGLMDNYKNVPQFLYGLSPAQIEMFMNDDNPYDRQSQRVTEESISASRSYDEFGMYNLSGMHEGPAGYSMGMGMGTMSMGRAGRGYRRMRSSAPDLPSLLLDSRIIFLGMPIVPAVTELIAAQFLWLDYDDRTKPIYLYINSTGTMDENNELVASETDAFAIADFINRSKSKVYTINLSMAYGQAAMLLSLGVKGKRGVLPNSITKLYLPKVHKSGGAAIDMWIKAKELDTNTDYYLELLSKGVGKPKEELAEFLKGPRYFRAQEAIDYGLADTILHSLDGSFKPKDLTAQLAKAQEMRQSGKRPAAGAGRWSTPSVPR*