Gene Details:

Functional Descriptions:

  • In this study, we isolated a NAC family transcription factor (TF), OsSND2 through yeast one-hybrid screening using the secondary wall NAC-binding element (SNBE) on the promoter region of OsMYB61 which is known transcription factor for regulation of SCWs biosynthesis as bait.
  • Overexpression of OsSND2 resulted in rolled leaf, increased cellulose content and up-regulated expression of SCWs related genes.
  • The knockout of OsSND2 using CRISPR/Cas9 system decreased cellulose content and down-regulated the expression of SCWs related genes.
  • OsSND2 was identified as a positive regulator of cellulose biosynthesis in rice.
  • Therefore, the study of the function of OsSND2 can provide a strategy for manipulating plant biomass production.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os05g48850.1
    AAGCTTTCCTTCTTCTTTTTTCCCCCTCTCGACGATCTCTCTCTCATCAGGACCCCGGCCTTAAGTTGTTTCTTCCCTATCAGCTCAGGTCTCTCTCGATCTCTCCTAGCTAGATAGATAGCTTAATTAGCAGCTAGAGATGTGTCTCTAGCTAAGCTAACTAGCTAGTAGGCTTCTTCTTTTAATCCGGCATTGTTCTTGGCTGCTGGTCTTAGTTTTTGGCTGTCATGTATGGAGTTAGTGGTAAAATACTAGGTTAATTAATAATATAAGGCGTGTGTATATATTGGTGTGGAGGAGGAGGAGAAAGGGGGTTGGCCGGAGAGATCGATGACGTGGTGCAACAGCTTCAGCGACGTCCGCACCGCCGTGGACAGCAGCTTGTCGCCGGCCGCCGCCGTGGCCGCCGCCGCGGGGAAGAAGGCGGCGGCGTCGCTCGCCGTCCTCGTCAAGATGTGCCCCTCCTGCGGCCACCGCGCGCGGTATGAACAGGAGACGACGACGATCCAGGACCTGCCGGGGCTGCCGGCCGGAGTGAAGTTCGATCCGACGGACCAGGAGCTTCTTGAGCATTTGGAAGGGAAGGCGAGGCCGGACTCGAGGAAGCTCCACCCTCTCGTCGACGAGTTCATCCCCACCATCGAGGGCGAGAATGGCATCTGCTACACCCATCCCGAGAGGCTTCCCGGTGTGAGCAAGGACGGGCTGGTGAGGCACTTCTTCCACCGGCCGTCGAAGGCGTACACGACGGGGACGAGGAAGCGGCGGAAGGTGCACAGCGACGAGGTCGACGGCGGCGAGACGCGGTGGCACAAGACCGGCAAGACGAGACCGGTGATGGCCAACGGCCGGCCCAGGGGCTACAAGAAGATCCTCGTCCTCTACACCAACTACGGCAAGCAGCGCAAGCCGGAGAAGACCAACTGGGTGATGCACCAGTACCACCTCGGCTCCGACGAGGAGGAGCGGGACGGCGAGCTCGTCGTCTCCAAGGTCTTCTTCCAGACGCAGCCCAGGCAGTGCGGCTCCACCGCCGCCGCCGCCGCCGCCAAGGAGGCCTCCGCCGCCGTCGCCGCCGCCGTGGTGAACAGCAACTACTCCATCGTCCATGGCCATCAAGGTGGTGGTGGTGGTAGCTTTCTCAAGGAGGCAAACGTTGTGCACGAGTTCTACGACCCGGCAGCAACGATGGGTTACCGGCCACCTGCTCCTGCTGCGCACTTCGCGCCAAACTTCGCGGTGCACGCGGCAAGGAACAGCTTTGGTGGCCCTTGAAGGAAAAACCAAAATTACACAAAATCTAAACATTACCGTTTATACCGATATGATTCACATAGGTGCCATTATATTACATTCTTAACCTTACATTCATCCATCAGTTATTTGCAGTTTTGTTCAAAGTTGTTATATCGTTTCCGATGCTATACTGTGCAAAGATTATTACTACACGCCGTTCTAACTCGAAAATGTCAATTAATGTATCAGTTTGTACATGTATACATGCACACGGAAGAGGTCCTGATGATGCATCACTTCATAT
CDS Sequence
  • >LOC_Os05g48850.1
    ATGACGTGGTGCAACAGCTTCAGCGACGTCCGCACCGCCGTGGACAGCAGCTTGTCGCCGGCCGCCGCCGTGGCCGCCGCCGCGGGGAAGAAGGCGGCGGCGTCGCTCGCCGTCCTCGTCAAGATGTGCCCCTCCTGCGGCCACCGCGCGCGGTATGAACAGGAGACGACGACGATCCAGGACCTGCCGGGGCTGCCGGCCGGAGTGAAGTTCGATCCGACGGACCAGGAGCTTCTTGAGCATTTGGAAGGGAAGGCGAGGCCGGACTCGAGGAAGCTCCACCCTCTCGTCGACGAGTTCATCCCCACCATCGAGGGCGAGAATGGCATCTGCTACACCCATCCCGAGAGGCTTCCCGGTGTGAGCAAGGACGGGCTGGTGAGGCACTTCTTCCACCGGCCGTCGAAGGCGTACACGACGGGGACGAGGAAGCGGCGGAAGGTGCACAGCGACGAGGTCGACGGCGGCGAGACGCGGTGGCACAAGACCGGCAAGACGAGACCGGTGATGGCCAACGGCCGGCCCAGGGGCTACAAGAAGATCCTCGTCCTCTACACCAACTACGGCAAGCAGCGCAAGCCGGAGAAGACCAACTGGGTGATGCACCAGTACCACCTCGGCTCCGACGAGGAGGAGCGGGACGGCGAGCTCGTCGTCTCCAAGGTCTTCTTCCAGACGCAGCCCAGGCAGTGCGGCTCCACCGCCGCCGCCGCCGCCGCCAAGGAGGCCTCCGCCGCCGTCGCCGCCGCCGTGGTGAACAGCAACTACTCCATCGTCCATGGCCATCAAGGTGGTGGTGGTGGTAGCTTTCTCAAGGAGGCAAACGTTGTGCACGAGTTCTACGACCCGGCAGCAACGATGGGTTACCGGCCACCTGCTCCTGCTGCGCACTTCGCGCCAAACTTCGCGGTGCACGCGGCAAGGAACAGCTTTGGTGGCCCTTGA
Protein Sequence
  • >LOC_Os05g48850.1
    MTWCNSFSDVRTAVDSSLSPAAAVAAAAGKKAAASLAVLVKMCPSCGHRARYEQETTTIQDLPGLPAGVKFDPTDQELLEHLEGKARPDSRKLHPLVDEFIPTIEGENGICYTHPERLPGVSKDGLVRHFFHRPSKAYTTGTRKRRKVHSDEVDGGETRWHKTGKTRPVMANGRPRGYKKILVLYTNYGKQRKPEKTNWVMHQYHLGSDEEERDGELVVSKVFFQTQPRQCGSTAAAAAAKEASAAVAAAVVNSNYSIVHGHQGGGGGSFLKEANVVHEFYDPAATMGYRPPAPAAHFAPNFAVHAARNSFGGP*