Information report for OsDi19-1
Gene Details
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Functional Descriptions
- The changes in expression of few auxin and ABA associated genes, such as OsIAA13, OsIAA20, ILL8, OsbZIP12, OsPP2C51, OsDi19-1 and OsHOX24, among others, were validated under high-temperature conditions using RT-qPCR.
Literature and News
- Dynamic genome-wide association analysis and identification of candidate genes involved in anaerobic germination tolerance in rice . DOI: 10.1186/s12284-020-00444-x ; PMID: 33409869
- A comprehensive transcriptome analysis of contrasting rice cultivars highlights the role of auxin and ABA responsive genes in heat stress response . DOI: 10.1016/j.ygeno.2021.03.007 ; PMID: 33705886
Sequences
cDNA Sequence
- >LOC_Os05g48800.3
ACGCTGTGGGCATTTGGCGCGAACGCCGCCGGCGCCGCGGCGTGGCCCCACCAATCCACCATACGGTGGGCGGCGACAAAGGCGACGCGGCGTGTTTCCGTTTCACGGCGGGGTAAGAGTAAAACCGCCCAAAAACACCGGGAGGCAGCGGCAGCCACCGGCTTGGCTGGTGAGGAGTCGATGACGCGGCGGGGGACGGCGACCTCGCGAGTCGCGACCCGGTGCCCAAAGAATAAAAAAAAAAACCCGCGGTATACCTAGCTCCATTCCTCACTCCTCCCCCGCATCTCACCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAATAAATCAAGATGAGCCTAAGTAGTCGATAGATGCATGGGTAAATCCTGGTGCATATTTGCATAGATAAGTGCCCGGTCAAATTGCTGAAGGTAATATCCATGGCAGATAGGCACGCTTCTGCGGCACCAGGCGTCGTTTCCTCCCGTAAGGTGCAGAGTTGATGTGGGCACGGGGGCATCTTAAGTGTTATTGTAGCCGGTCTGTAATCTGTATCTCCAGTTCCATAACAATCCGCGATCAGCATACGATACACGTAGCAGATCGCGGTTGTGTTTGTAGCGCTTCTATGTTTAGAAGCATTGGTTTCTTGTACCAACGTAATAATTATGTTACGGGACAGCAGAATGGTATGCAGTTTGTCTACTTCTGTGAGAGTATAATAAACCAAGTTTACAACTGGTTGGTTTTGGAAGATTATGCTGTAAGATGAAGCATCTGTAACGTGTTGTACGTGATGGTATCACTTGTACCGTGCCACTGCATGACGCTGTAACAGTCTTATGGAATGGATCGATACATGGGGGATGGGGGGTGTTTAGACGAGGGTGTAAA - >LOC_Os05g48800.2
ACGCTGTGGGCATTTGGCGCGAACGCCGCCGGCGCCGCGGCGTGGCCCCACCAATCCACCATACGGTGGGCGGCGACAAAGGCGACGCGGCGTGTTTCCGTTTCACGGCGGGGTAAGAGTAAAACCGCCCAAAAACACCGGGAGGCAGCGGCAGCCACCGGCTTGGCTGGTGAGGAGTCGATGACGCGGCGGGGGACGGCGACCTCGCGAGTCGCGACCCGGTGCCCAAAGAATAAAAAAAAAAACCCGCGGTATACCTAGCTCCATTCCTCACTCCTCCCCCGCATCTCACCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAATAAATCAAGATGAGCCTAAGTAGTCGATAGATGCATGGGTAAATCCTGGTGCATATTTGCATAGATAAGTGCCCGGTCAAATTGCTGAAGGTAATATCCATGGCAGATAGGCACGCTTCTGCGGCACCAGGCGTCGTTTCCTCCCGTAAGGTGCAGAGTTGATGTGGGCACGGGGGCATCTTAAGTGTTATTGTAGCCGGTCTGTAATCTGTATCTCCAGTTCCATAACAATCCGCGATCAGCATACGATACACGTAGCAGATCGCGGTTGTGTTTGTAGCGCTTCTATGTTTAGAAGCATTGGTTTCTTGTACCAACGTAATAATTATGTTACGGGACAGCAGAATGGTATGCAGTTTGTCTACTTCTGTGAGAGTATAATAAACCAAGTTTACAACTGGTTGGTTTTGGAAGATTATGCTGTAAGATGAAGCATCTGTAACGTGTTGTACGTGATGGTATCACTTGTACCGTGCCACTGCATGACGCTGTAACAGTCTTATGGAATGGATCGATACATGGGGGATGGGGGGTGTTTAGACGAGGGTGTAAA - >LOC_Os05g48800.1
ACGCTGTGGGCATTTGGCGCGAACGCCGCCGGCGCCGCGGCGTGGCCCCACCAATCCACCATACGGTGGGCGGCGACAAAGGCGACGCGGCGTGTTTCCGTTTCACGGCGGGGTAAGAGTAAAACCGCCCAAAAACACCGGGAGGCAGCGGCAGCCACCGGCTTGGCTGGTGAGGAGTCGATGACGCGGCGGGGGACGGCGACCTCGCGAGTCGCGACCCGGTGCCCAAAGAATAAAAAAAAAAACCCGCGGTATACCTAGCTCCATTCCTCACTCCTCCCCCGCATCTCACCTCACCTCACCTCCCGATAAGGCACGAGGAGACTATCTCCTCCCCCTCCTCCTCCTCTCCCCGCCGACGACCCCGCCGAGCTACATCTCCGCCGTGCTGATCGCGTGGAGCCGAGGAGAGGAGCGGCGGCCAACGCTACGAGGAGAGGAGAGTGGGGGAGGGGAGGGGAGCGAGCCTTATCTTACCCGCTCCGCCGAAGCCTATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAATAAATCAAGATGAGCCTAAGTAGTCGATAGATGCATGGGTAAATCCTGGTGCATATTTGCATAGATAAGTGCCCGGTCAAATTGCTGAAGGTAATATCCATGGCAGATAGGCACGCTTCTGCGGCACCAGGCGTCGTTTCCTCCCGTAAGGTGCAGAGTTGATGTGGGCACGGGGGCATCTTAAGTGTTATTGTAGCCGGTCTGTAATCTGTATCTCCAGTTCCATAACAATCCGCGATCAGCATACGATACACGTAGCAGATCGCGGTTGTGTTTGTAGCGCTTCTATGTTTAGAAGCATTGGTTTCTTGTACCAACGTAATAATTATGTTACGGGACAGCAGAATGGTATGCAGTTTGTCTACTTCTGTGAGAGTATAATAAACCAAGTTTACAACTGGTTGGTTTTGGAAGATTATGCTGTAAGATGAAGCATCTGTAACGTGTTGTACGTGATGGTATCACTTGTACCGTGCCACTGCATGACGCTGTAACAGTCTTATGGAATGGATCGATACATGGGGGATGGGGGGTGTTTAGACGAGGGTGTAAA
CDS Sequence
- >LOC_Os05g48800.3
ATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAA - >LOC_Os05g48800.2
ATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAA - >LOC_Os05g48800.1
ATGGACTCGGAGCACTGGATCTCGCGCCTGGCCGCCGCCAAGCGGTTCTACGCCGCGCAGCTCGGCCACGCCGATCGAGCGGGGATGGAGGAGGTGGACATGGACGAGGAGGTGAGGCCGGAGTTCGCGTGCCCCTACTGCTACGAGGACCACGACGTCGTCTCCCTCTGCGCGCACCTGGAGGAGGAGCACCCCTTCGAGCCCCATGCGGCGAATCGTCGCAGGTTGCGCAGATTCGTTATTCCAGGCAGTCAAGCCCTATCTTTGCTGAGTCGAGATCTACGTGAAGCCCATTTGCAGGTGCTTCTGGGAGGTGGGGGACATAGGTCAAACAACAGCAGCAACACAACAAATATTTCAGCTGACCCTCTTCTGTCATCGTTTGGCCTTAGCTTTCCAACATCAGACACAGAGGAAACATCAAAACCACCTATTTCCATTCCAGATGATGCATCTGTGATAAAAGAGACACCTGCTCAGCCATGGGATTCAAGTATTGACTCATCCCTCACAAGGGAAGAAAGGGAACAGAAACGGAAGCAAGCGAGTGTCAGAGCAACATTTGTGCAAGACCTGCTGCTCACTACTTTATTTGGAGATTAA
Protein Sequence
- >LOC_Os05g48800.3
MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAANRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD* - >LOC_Os05g48800.2
MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAANRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD* - >LOC_Os05g48800.1
MDSEHWISRLAAAKRFYAAQLGHADRAGMEEVDMDEEVRPEFACPYCYEDHDVVSLCAHLEEEHPFEPHAANRRRLRRFVIPGSQALSLLSRDLREAHLQVLLGGGGHRSNNSSNTTNISADPLLSSFGLSFPTSDTEETSKPPISIPDDASVIKETPAQPWDSSIDSSLTREEREQKRKQASVRATFVQDLLLTTLFGD*