Gene Details:
- MSU gene ID: LOC_Os05g46530
- RAPdb gene ID: Os05g0543000
- Gene Symbol: OSIPP3
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Pollen-specific expression was observed in case of plants harboring OSIPP3_del4 construct.
- It can, therefore, be concluded that the OSIPP3 URR between -178 and +108 bp is necessary for conferring pollen-specific expression in Arabidopsis.
- A 286 bp upstream regulatory region of a rice anther-specific gene, OSIPP3, confers pollen-specific expression in Arabidopsis.
- OSIPP3_del1 and del2 transgenic plants showed GUS expression in root, anther and silique, while OSIPP3_del3 showed GUS activity only in anthers and siliques.
- OSIPP3 gene (coding for pectin methylesterase inhibitor protein) was isolated from a pre-pollinated inflorescence-specific cDNA library by differential screening of stage-specific libraries from Oryza sativa.
- OSIPP3 gene was expressed exclusively in the pre-pollinated spikelets of rice.
Function-related keywords:
- pollen , root , inflorescence , spikelet , anther
Literature:
- A 286 bp upstream regulatory region of a rice anther-specific gene, OSIPP3, confers pollen-specific expression in Arabidopsis . DOI: 10.1007/s10529-012-1100-7 ; PMID: 23208453
- Identification of cis-elements and evaluation of upstream regulatory region of a rice anther-specific gene, OSIPP3, conferring pollen-specific expression in Oryza sativa (L.) ssp. indica . DOI: 10.1007/s00497-015-0264-4 ; PMID: 26081459
Related News:
Gene Resources:
- NCBI ID: AK107100
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os05g46530.1
AAGCCATCACCAAACCTTTTAGCTTCTCAGCCTTTTGCCTCTCTTTCTACTCTCTTTCTTGGCCGTCTCTCTTATATCCCTCAATTTAACCATCGAGGGCGGCCAAAAAAAAGAGAGAAAGGAAGAGCAAAATAACACATTACACCATGGCGCGATTCGTCATCATCTCCGTCGTCGTCGTCGCCGCCTTCGCCGCTGCCGCTGTCGTTGAGGCCCGGGTTGGACCTATCGACGTCGCTCCGACCAACCTGATCACCAACCCACTCGGTGCCATCATCGACAATGGCCGCAAGATCACCGGCGCCGTCGTCGACGAGTGCGCCTGGACCTGCGATCATGTCGCGGCGGGTAACAAGAAGATGTGCAACACGCTGAGGAAGCTGCCGGGGGTGAGCTCGCCGAAGGAGCTCCTGACGGCGGCGGTGAAGCTGTCGATGAGGAAGGCGAAGGCGGCGAGGGCGAGGTTCGAGGCGGCGGCGAGGGCGGCGGAGAAGGGGACGCCGATGGAGTCCATCCTGGACACCTGCAAGGAAGGGTACGACAGCACGGTGTCGGCGCTGCAGGAGGTGCAGCGCTGCATCGACGCCAACGACAGCAAGGCGAGCCTCATCACCAAGATGTCGGCGGCGACCACCTTCACCGGCGACTGCGGCAACGCCTACGAGGAGCGGGAGCTGGAGCCCAGCCTCGCGCTCAAGGCCACCAAGAACAACGTCAACCGCGTCGTCACCGGCGCCCTCGCCATCGCCGCCAAGCTCAAGCTATAATTAGCCAACTGATCATCAATCGATATGAATGATTGATCAACTATAAAATTACACCTAGCTCATGCATGCGTCCGCGCGTTATGTGTGTACGCACGCATGCATATGTGTAAGATCGATCAACAGATCACAGAAGTGGTGGCGTATCTCGCACTTGTGAAAAAAAAATATAAAAAAAAGGCTGGAGAACAAAAATGTAGTATGCTATCTTAATTTTTAAGGTGATTAATATATATGGCGAATTCAACGACCGACA
CDS Sequence
- >LOC_Os05g46530.1
ATGGCGCGATTCGTCATCATCTCCGTCGTCGTCGTCGCCGCCTTCGCCGCTGCCGCTGTCGTTGAGGCCCGGGTTGGACCTATCGACGTCGCTCCGACCAACCTGATCACCAACCCACTCGGTGCCATCATCGACAATGGCCGCAAGATCACCGGCGCCGTCGTCGACGAGTGCGCCTGGACCTGCGATCATGTCGCGGCGGGTAACAAGAAGATGTGCAACACGCTGAGGAAGCTGCCGGGGGTGAGCTCGCCGAAGGAGCTCCTGACGGCGGCGGTGAAGCTGTCGATGAGGAAGGCGAAGGCGGCGAGGGCGAGGTTCGAGGCGGCGGCGAGGGCGGCGGAGAAGGGGACGCCGATGGAGTCCATCCTGGACACCTGCAAGGAAGGGTACGACAGCACGGTGTCGGCGCTGCAGGAGGTGCAGCGCTGCATCGACGCCAACGACAGCAAGGCGAGCCTCATCACCAAGATGTCGGCGGCGACCACCTTCACCGGCGACTGCGGCAACGCCTACGAGGAGCGGGAGCTGGAGCCCAGCCTCGCGCTCAAGGCCACCAAGAACAACGTCAACCGCGTCGTCACCGGCGCCCTCGCCATCGCCGCCAAGCTCAAGCTATAA
Protein Sequence
- >LOC_Os05g46530.1
MARFVIISVVVVAAFAAAAVVEARVGPIDVAPTNLITNPLGAIIDNGRKITGAVVDECAWTCDHVAAGNKKMCNTLRKLPGVSSPKELLTAAVKLSMRKAKAARARFEAAARAAEKGTPMESILDTCKEGYDSTVSALQEVQRCIDANDSKASLITKMSAATTFTGDCGNAYEERELEPSLALKATKNNVNRVVTGALAIAAKLKL*