Information report for OsLF
Gene Details
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Functional Descriptions
- Interestingly, LC2 binds to the promoter region of a floral repressor OsLF and represses the OsLF expression via H3K27 tri-methylation modification.
- In this study, we isolated the OsLF gene by its association with the T-DNA insertion in the rice late flowering mutant named A654.
- Overexpression of the OsLF gene in wild type rice recapitulated the late flowering phenotype of A654, indicating that the OsLF gene negatively regulates flowering.
- Together, these results suggest that overexpression of OsLF might repress expression of OsGI and Hd1 by competing with OsPRR1 in interacting with OsPIL13 and OsPIL15 and thus induce late flowering.
- An atypical HLH protein OsLF in rice regulates flowering time and interacts with OsPIL13 and OsPIL15.
- LC2 and OsVIL2 promote rice flowering by photoperoid-induced epigenetic silencing of OsLF.
Functional Keywords
Literature and News
Gene Resources
- UniProt: A0A0P0WQ90
- EMBL: AC104713, AP008211, AP014961
- AlphaFoldDB: A0A0P0WQ90
- EnsemblPlants: Os05t0541400-01
- Gramene: Os05t0541400-01
- KEGG: dosa:Os05g0541400, osa:9269440
- Orthologous matrix: DRFAFPN
- InterPro: IPR011598, IPR036638, IPR045843
- PANTHER: PTHR45914, PTHR45914:SF40
- SUPFAM: SSF47459
- PROSITE: PS50888
- Gene3D: 4.10.280.10
- OrthoDB: A0A0P0WQ90
- SWISS-MODEL: A0A0P0WQ90
- Conserved Domain Database: cd11454
- eggNOG: ENOG502QR69
Sequences
cDNA Sequence
- >LOC_Os05g46370.1
ACAGGCAGAGGACCATCCTAGCAAACGCTGCACTTGTGCTCAGTTCGTCCCCATGCTACACCAATCTCTTCAGAATCTATCTCAGATCGGCACTTACCTATAGCTGAAATGATCAGATATCCTCACTAATCAGTTAATTGCAGTGGTAGTAGCAGCAGATAGCTACAGGCGAGTTTAGCTAGCCAATTTGGAAGCCTCGCCGGCGGCGACCGCGTCATGTACATGGACGCCTTCGGGTGGAGCGCGCCAGCCGCGCCGTGCCAGCCGAGCTGCGGCCCCGGCGGCGACGACGACGACGACGTCCTCCTCGCCGCCGTCTTGGGCGCGAGCTTCGAGCTCCACTCCCTCGTCGACGGCGGCGGCAACGGCGCCGCCGGCGCCGTTCGCTCTGACGATGCCTACGGCCTCGACGTCGACCTGCCGTCCCACCAGATGAGCCTCCTGCGTTGCCAAGATGGTCTGAGTGCTCTTCACGGCGACGCGTCCCCGACGGCGGCGGCGGCGGCGTTCCTTGACTCGGTGGATGTGTTGCCAGTGCCGGCCATCGCCGGCGCGACGCACGACGACGGCGGGCTCCTCGATAGGTTCGCGTTCCCGAACGTTGCCGAGACGACGACCGTGCAAGCCGCCGCGTCGAACACCGCCTTCTCCGGATACAGCAGCAACACCACCGGCGGCGGCAACATCTCCTCCGGCGAGTCGAACACCTACACGGAGGTGGCGTCGACGCCGTGCGCCGTGTCGACGACGACGACGACGACGGCTCTGCCCCCGTCGAAGCGGAAGCTACCAGAGAAGTACCCCGTCGTAGGCACATCACCAACGACGAAGACCACGACGACGTCGGAGACAGCCGCAGAGCGCCGGAGCACCAAGAGAGGGGCCGGGGGCAGCAGCAGCATCACGTTCGGCGGCGGCTGCCACGGCGCCGGTGCGGCGGCGGCGCTGCTCGGCTACGGCCGCGGGTACGAGCCGGACACGGAGGCGATAGCGCAGGTGAAGGAGATGATCTACCGCGCGGCGGCGATGCGCCCGGTCACCCTCGGCGGCCCCGCCTCCGCCTCCGACCCGTCATCCCGGCCGCCGCCGCCGCCCCAGCGGCCGCGGCGCAAGAACGTGCGCATCTCCAGCGACCCGCAGACGGTGGCGGCGCGGCTGCGGCGGGAGCGGGTGAGCGAGCGCCTGCGCGTGCTGCAGCGGCTGGTCCCCGGCGGCAGCAAGATGGACACGGCCACCATGCTCGACGAGGCCGCCAGCTACCTCAAGTTCCTCAAGTCGCAGCTCGAGGCGCTGGAAACCCTAGGGAATGGCAATGGCAACGGCAACCTGTTGCACCATGGCTACTACACTGGATCAAGAAATGCTACTGCTACTGCTGCTACTGGTTCTAGCAATAGCACTGTACTTGCATTTGGGCGAGATGGACTTGCTGGCTTTGTGAAATCCAATAGGAATTTGCAATTGTAGTACTGTGTACCATGCATGATTCATGCATGCATGCAAGGTGTGTATTCGTGTGAGTGACATATATATATTTTATACATGCATGAGACAAATCTCTTGCTGTTCAAGCTGATAAAAATTAATGCTTCATTTTTACCTTTTGATCGATTGAGAGGATTTTATATGATTAACAGTGTGTAACTAGGGCTGAGTTCTTATTTTACTTTTCCGACTCA
CDS Sequence
- >LOC_Os05g46370.1
ATGTACATGGACGCCTTCGGGTGGAGCGCGCCAGCCGCGCCGTGCCAGCCGAGCTGCGGCCCCGGCGGCGACGACGACGACGACGTCCTCCTCGCCGCCGTCTTGGGCGCGAGCTTCGAGCTCCACTCCCTCGTCGACGGCGGCGGCAACGGCGCCGCCGGCGCCGTTCGCTCTGACGATGCCTACGGCCTCGACGTCGACCTGCCGTCCCACCAGATGAGCCTCCTGCGTTGCCAAGATGGTCTGAGTGCTCTTCACGGCGACGCGTCCCCGACGGCGGCGGCGGCGGCGTTCCTTGACTCGGTGGATGTGTTGCCAGTGCCGGCCATCGCCGGCGCGACGCACGACGACGGCGGGCTCCTCGATAGGTTCGCGTTCCCGAACGTTGCCGAGACGACGACCGTGCAAGCCGCCGCGTCGAACACCGCCTTCTCCGGATACAGCAGCAACACCACCGGCGGCGGCAACATCTCCTCCGGCGAGTCGAACACCTACACGGAGGTGGCGTCGACGCCGTGCGCCGTGTCGACGACGACGACGACGACGGCTCTGCCCCCGTCGAAGCGGAAGCTACCAGAGAAGTACCCCGTCGTAGGCACATCACCAACGACGAAGACCACGACGACGTCGGAGACAGCCGCAGAGCGCCGGAGCACCAAGAGAGGGGCCGGGGGCAGCAGCAGCATCACGTTCGGCGGCGGCTGCCACGGCGCCGGTGCGGCGGCGGCGCTGCTCGGCTACGGCCGCGGGTACGAGCCGGACACGGAGGCGATAGCGCAGGTGAAGGAGATGATCTACCGCGCGGCGGCGATGCGCCCGGTCACCCTCGGCGGCCCCGCCTCCGCCTCCGACCCGTCATCCCGGCCGCCGCCGCCGCCCCAGCGGCCGCGGCGCAAGAACGTGCGCATCTCCAGCGACCCGCAGACGGTGGCGGCGCGGCTGCGGCGGGAGCGGGTGAGCGAGCGCCTGCGCGTGCTGCAGCGGCTGGTCCCCGGCGGCAGCAAGATGGACACGGCCACCATGCTCGACGAGGCCGCCAGCTACCTCAAGTTCCTCAAGTCGCAGCTCGAGGCGCTGGAAACCCTAGGGAATGGCAATGGCAACGGCAACCTGTTGCACCATGGCTACTACACTGGATCAAGAAATGCTACTGCTACTGCTGCTACTGGTTCTAGCAATAGCACTGTACTTGCATTTGGGCGAGATGGACTTGCTGGCTTTGTGAAATCCAATAGGAATTTGCAATTGTAG
Protein Sequence
- >LOC_Os05g46370.1
MYMDAFGWSAPAAPCQPSCGPGGDDDDDVLLAAVLGASFELHSLVDGGGNGAAGAVRSDDAYGLDVDLPSHQMSLLRCQDGLSALHGDASPTAAAAAFLDSVDVLPVPAIAGATHDDGGLLDRFAFPNVAETTTVQAAASNTAFSGYSSNTTGGGNISSGESNTYTEVASTPCAVSTTTTTTALPPSKRKLPEKYPVVGTSPTTKTTTTSETAAERRSTKRGAGGSSSITFGGGCHGAGAAAALLGYGRGYEPDTEAIAQVKEMIYRAAAMRPVTLGGPASASDPSSRPPPPPQRPRRKNVRISSDPQTVAARLRRERVSERLRVLQRLVPGGSKMDTATMLDEAASYLKFLKSQLEALETLGNGNGNGNLLHHGYYTGSRNATATAATGSSNSTVLAFGRDGLAGFVKSNRNLQL*