Gene Details:
- MSU gene ID: LOC_Os05g45280
- RAPdb gene ID: Os05g0529000
- Gene Symbol: OsCOLE1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Overexpression of OsCOLE1 markedly increased the internode length and auxin content of the stem base, whereas these parameters were decreased in RNA interference (RNAi) plants.
- The results indicate that OsCOLE1 affects rice development by regulating intracellular auxin transport through interaction with OsCLIP, which provides a new insight into the regulatory mechanism of intracellular transport of auxin and the roles of vacuoles in plant development.
- Furthermore, (3) H-indole-3-acetic acid ((3) H-IAA) transport assays revealed that OsCLIP transported IAA into yeast cells, which was promoted by OsCOLE1.
Function-related keywords:
- stem , development , auxin , iaa , auxin-transport , internode-length , IAA , plant-development
Literature:
- Interactions of Oryza sativa OsCONTINUOUS VASCULAR RING-LIKE 1 (OsCOLE1) and OsCOLE1-INTERACTING PROTEIN reveal a novel intracellular auxin transport mechanism . DOI: 10.1111/nph.14021 ; PMID: 27265035
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g45280.1
GAAGGGGAGACGCCCTCATCTCGCTCGCGCCGAGCCGCATCCCCGTTTCGCAGCGATCGCGACGACCGAGGCCGCCCGGGAGGTCGCGGCGGCGGCGGCGGCGGTGGCAGGGAGGTGCCCGATGGGCGACGAGAAGTCTCCGCTGAGCCAGATGGGCAGCCGCGACCGGGACCGGGAGCTCCTCATCCCCGTCTCCGGCGGCGGCTCGGCCCCCGGAGACGGCGACGGGGACGGCGACAGGGCGGCCTCCTCCTCCGCGTCCGCCGCTCTGTCCTCCTCCAGCCGCGAGGCTTTTCATAAGGTGGTCCGAAGTTGGGCTTCAAAGAAATTCATGACTGGATGTGTAATTCTCTTCCCCATAGCAATAACATTCTACATCACATGGTGGTTCATTCATTTTGTTGACGGATTCTTCTCGCCAATCTATGCTCAACTGGGAATCAACATGTTTGGTCTTGGCTTTATCACTTCTGTTACCTTCATATTTGTGGTTGGAGTCTTCATGTCATCTTGGGTTGGAGCATCTGTCCTTAGCCTTGGTGAGTGGATTATTAAGCGCATGCCACTTGTCCGTCATATCTACAATGCATCCAAGCAAATAAGTGCTGCAATATCACCAGATCAGAACAAACAGGCATTCAAGGAAGTGGTCATCATAAGGCATCCTCGTATTGGAGAATATGCATTTGGTTTCATTACATCATCAGTCTCTCTCCAGAGTTATACTGGTCAAGAGGAACTGTACTGCGTGTATGTCCCAACCAACCATCTTTATATTGGTGATATCTTCATGGTAAATTCGAAGGATGTTATAAGGCCAAATCTTTCTGTCCGTGAAGGCATCGAAATTGTTGTATCTGGTGGCATGTCGATGCCCCAAATTCTATCAACTCTGGACCCACAGACAATTCTTGGAGACAGAACAGGAGCAAGCAGAAGCTGAGATCTCTCCTTGGTTGCAACTTGACTAAAATTATCAGACCAAGTACAGTGAACTAGATCCTGAGCAACACGATGTATTAGTGGTCTGTCGAGCTCTAGGATCACAAGGATCTGTAAATTAGTAGAAGTAGGTGACTCATATATTCCTTGTTCATCCGTTGGCAGTTTGTACCATGGTTTGCACTTTCTACCACGTTCTATACAAGAATGCTTCGTAGTTGTAACGCCTTCTTTACTTCTTACTGTTTTGAGCGTTGACAGCACTTGCCTTTAACCATGTTGAAGGTCATCCTGGTGAACTCTTGAAATATAAAGCCTTCTCGCA
CDS Sequence
- >LOC_Os05g45280.1
ATGGGCGACGAGAAGTCTCCGCTGAGCCAGATGGGCAGCCGCGACCGGGACCGGGAGCTCCTCATCCCCGTCTCCGGCGGCGGCTCGGCCCCCGGAGACGGCGACGGGGACGGCGACAGGGCGGCCTCCTCCTCCGCGTCCGCCGCTCTGTCCTCCTCCAGCCGCGAGGCTTTTCATAAGGTGGTCCGAAGTTGGGCTTCAAAGAAATTCATGACTGGATGTGTAATTCTCTTCCCCATAGCAATAACATTCTACATCACATGGTGGTTCATTCATTTTGTTGACGGATTCTTCTCGCCAATCTATGCTCAACTGGGAATCAACATGTTTGGTCTTGGCTTTATCACTTCTGTTACCTTCATATTTGTGGTTGGAGTCTTCATGTCATCTTGGGTTGGAGCATCTGTCCTTAGCCTTGGTGAGTGGATTATTAAGCGCATGCCACTTGTCCGTCATATCTACAATGCATCCAAGCAAATAAGTGCTGCAATATCACCAGATCAGAACAAACAGGCATTCAAGGAAGTGGTCATCATAAGGCATCCTCGTATTGGAGAATATGCATTTGGTTTCATTACATCATCAGTCTCTCTCCAGAGTTATACTGGTCAAGAGGAACTGTACTGCGTGTATGTCCCAACCAACCATCTTTATATTGGTGATATCTTCATGGTAAATTCGAAGGATGTTATAAGGCCAAATCTTTCTGTCCGTGAAGGCATCGAAATTGTTGTATCTGGTGGCATGTCGATGCCCCAAATTCTATCAACTCTGGACCCACAGACAATTCTTGGAGACAGAACAGGAGCAAGCAGAAGCTGA
Protein Sequence
- >LOC_Os05g45280.1
MGDEKSPLSQMGSRDRDRELLIPVSGGGSAPGDGDGDGDRAASSSASAALSSSSREAFHKVVRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINMFGLGFITSVTFIFVVGVFMSSWVGASVLSLGEWIIKRMPLVRHIYNASKQISAAISPDQNKQAFKEVVIIRHPRIGEYAFGFITSSVSLQSYTGQEELYCVYVPTNHLYIGDIFMVNSKDVIRPNLSVREGIEIVVSGGMSMPQILSTLDPQTILGDRTGASRS*