Gene Details:
- MSU gene ID: LOC_Os05g43880
- RAPdb gene ID: Os05g0514600
- Gene Symbol: SBI
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Genetic analyses indicate that SBI is a semi-dominant gene affecting rice height and lodging resistance.
- Breeding with higher activity of the SBI allele generates new rice varieties with improved lodging resistance and increased yield.
- The discovery of the SBI provides a desirable gene resource for producing semi-dwarf rice phenotypes and offers an effective strategy for breeding rice varieties with lodging resistance and high yield.
- SBI is predominantly expressed in culm basal internodes.
- SBI allelic variants display different activities and are associated with the height of rice varieties.
Function-related keywords:
- resistance , yield , culm , lodging , lodging-resistance , breeding , height
Literature:
- Shortened Basal Internodes Encodes a Gibberellin 2-Oxidase and Contributes to Lodging Resistance in Rice . DOI: 10.1016/j.molp.2017.12.004 ; PMID: 29253619
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g43880.1
ATGGTGGTGCTCGCGAAGCCGGCGGCGCTGGAGCAGATCTCGCTGGTGAGGTCGCCGTCGGTGGAGGATAACTTCGGCGCCGGGTTGCCGGTGGTGGACCTGGCCGCGGACGGCGCGGCGGGCGAGGTGGTGCGGGCGTGCGAGAGGTTTGGGTTCTTCAAGGTGGTGAGCCATGGCGTCGGGGAGGGCGTGGTGGGTAGGCTGGAGGCGGAGGCCGTCCGGTTCTTCGCGTCGCCGCAGGCGGCGAAGGACGCGCACGGCCCCGCGTCGCCGTTCGGGTACGGGAGCAAGCGCATCGGCCGCAATGGCGACATGGGGTGGCTCGAGTACCTCCTCCTCGCCATCGACGGCGCGTCCCTCTCCCGTTCCTCCCCCGCACCGTCGTCCTCGCTCCGGGACGCGGCGAACAAGTACGTGGGCGCCATGCGGGGGATGGCGAGGACGGTGCTGGAGATGGTGGCGGAGGGCCTCGGCGTGGCGCCGCGCGGCGCGCTCGCCGACATGGTCGTCGGCGACGGCGCGGCGAGCGACCAGATCCTCCGGCTGAACCACTACCCGCCATGCCCGCCGCTGCTGCAGAACCTGATGCCCAACTGCAGCCCGACCGGGTTCGGCGAGCACACCGACCCGCAGCTCATCTCCATCCTCCACTCCAACTCCACCTCCGGCCTCCAGGTCGCCCTCCACCACGACGCCGACGCCGGCGACCACCAGTGGGTCACCGTCCCTCCCGACCCCGCCTCCTTCCTCGTCATCGTCGGCGACTCGCTGCAGGTGATGACGAACGGGAGGATGAGGAGCGTCCGGCACAGGGTGGTGGCCAACAAGCTCAAGTCGAGGGTGTCAATGATCTACTTCGGAGGGCCGCCATTGGAGCAGAGGATCGCGCCGCTGCGGCAGCTGCTGGTGGCCGGCGTCGGCAACGGCGAGGAGGAGGAGCAGAGCCGGTACGAGGAGTTCACGTGGGGGGAGTACAAGAAGGCTGCCTACCTCTCCCGCCTCAGCGACAACCGCCTGGCCCCCTTCCACCGGCAGCCACCACCTGTCGCTAACCCACTCGCCTAA
CDS Sequence
- >LOC_Os05g43880.1
ATGGTGGTGCTCGCGAAGCCGGCGGCGCTGGAGCAGATCTCGCTGGTGAGGTCGCCGTCGGTGGAGGATAACTTCGGCGCCGGGTTGCCGGTGGTGGACCTGGCCGCGGACGGCGCGGCGGGCGAGGTGGTGCGGGCGTGCGAGAGGTTTGGGTTCTTCAAGGTGGTGAGCCATGGCGTCGGGGAGGGCGTGGTGGGTAGGCTGGAGGCGGAGGCCGTCCGGTTCTTCGCGTCGCCGCAGGCGGCGAAGGACGCGCACGGCCCCGCGTCGCCGTTCGGGTACGGGAGCAAGCGCATCGGCCGCAATGGCGACATGGGGTGGCTCGAGTACCTCCTCCTCGCCATCGACGGCGCGTCCCTCTCCCGTTCCTCCCCCGCACCGTCGTCCTCGCTCCGGGACGCGGCGAACAAGTACGTGGGCGCCATGCGGGGGATGGCGAGGACGGTGCTGGAGATGGTGGCGGAGGGCCTCGGCGTGGCGCCGCGCGGCGCGCTCGCCGACATGGTCGTCGGCGACGGCGCGGCGAGCGACCAGATCCTCCGGCTGAACCACTACCCGCCATGCCCGCCGCTGCTGCAGAACCTGATGCCCAACTGCAGCCCGACCGGGTTCGGCGAGCACACCGACCCGCAGCTCATCTCCATCCTCCACTCCAACTCCACCTCCGGCCTCCAGGTCGCCCTCCACCACGACGCCGACGCCGGCGACCACCAGTGGGTCACCGTCCCTCCCGACCCCGCCTCCTTCCTCGTCATCGTCGGCGACTCGCTGCAGGTGATGACGAACGGGAGGATGAGGAGCGTCCGGCACAGGGTGGTGGCCAACAAGCTCAAGTCGAGGGTGTCAATGATCTACTTCGGAGGGCCGCCATTGGAGCAGAGGATCGCGCCGCTGCGGCAGCTGCTGGTGGCCGGCGTCGGCAACGGCGAGGAGGAGGAGCAGAGCCGGTACGAGGAGTTCACGTGGGGGGAGTACAAGAAGGCTGCCTACCTCTCCCGCCTCAGCGACAACCGCCTGGCCCCCTTCCACCGGCAGCCACCACCTGTCGCTAACCCACTCGCCTAA
Protein Sequence
- >LOC_Os05g43880.1
MVVLAKPAALEQISLVRSPSVEDNFGAGLPVVDLAADGAAGEVVRACERFGFFKVVSHGVGEGVVGRLEAEAVRFFASPQAAKDAHGPASPFGYGSKRIGRNGDMGWLEYLLLAIDGASLSRSSPAPSSSLRDAANKYVGAMRGMARTVLEMVAEGLGVAPRGALADMVVGDGAASDQILRLNHYPPCPPLLQNLMPNCSPTGFGEHTDPQLISILHSNSTSGLQVALHHDADAGDHQWVTVPPDPASFLVIVGDSLQVMTNGRMRSVRHRVVANKLKSRVSMIYFGGPPLEQRIAPLRQLLVAGVGNGEEEEQSRYEEFTWGEYKKAAYLSRLSDNRLAPFHRQPPPVANPLA*