Gene Details:
- MSU gene ID: LOC_Os05g40980
- RAPdb gene ID: Os05g0488800
- Gene Symbol: OsSIRP1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Heterogeneous overexpression of OsSIRP1 in Arabidopsis reduced tolerance for salinity stress during seed germination and root growth.
- Our findings indicate that OsSIRP1 acts as a negative regulator of salinity stress tolerance mediated by the ubiquitin 26S proteasome system.
- Transcript levels of OsSIRP1 in rice leaves after various stress treatments, including salt, heat, drought, and hormone (ABA), were observed.
Function-related keywords:
- root , growth , seed , salinity , seed-germination , tolerance , salinity-stress , stress , Ubiquitin , stress-tolerance
Literature:
- Molecular dissection of Oryza sativa salt-induced RING Finger Protein 1 (OsSIRP1): possible involvement in the sensitivity response to salinity stress . DOI: 10.1111/ppl.12459 ; PMID: 27118216
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g40980.2
GAGAGAAAAAAAATTGGTAGTAGTACGATAACCTCTAGGGATGGAGTAAAGTATCCAGCTTTGCAGCCACCTGCCCTCTGAACTTCTTGTTCTTCGTCTCACACTTCGCCCGAAGCAAACGAGAACAAGACGACCGCCTCTATCCAATCCAATATCCCAGTCCAATCGAAAGATTTGCGTTTTGATCGTGGTGCCGTCAACCGAAGGATTTGCAAGATGGCAGAAGCTGCAATCACAAGGTACTGGCCATGGTGGATGAGATCAAGTGCCCATCCTGTGGTGGCGGGTTCGTTGAAGAGATGACCGATGAGGAGATTGAGAGACTGACCAACAGGCAGCCAGAGCCGGGTTTCTCGCAATGGAACCCTATTGAGCATCCAGGAGAAACGATGGACAGCGACGATGAAGATAATGATTTAGGTCGTGAGTTTGAGGGTTTTATCAGGAGGCATCGACGGGCATCAACTCTACGACGCGTGCTTGACAGCATCCATGATGACCTTGCAGATGACCAAGAAAGGGACAGTTCCATTCTGATCAACGCCTTCAACCAAGCCCTCGCTCTGCAAGGCTCAGTGCTTGATCCTGATGAGGGCCAAGGTGACCAAGGCGGTTCAACAAATGATGATGGCTTACTGGAGGAGTATGTCCTCGGAGCAGGTCTGAGCCTGCTGCTTCAACATTTGGCTGAGAGCGACCCAAGTCGGAATGGTACCCCTCCTGCAAAGAAAGAGGCGGTTGAAGCGCTGCCCACTGTGAAAATCGAAGAGGTTGTCAGCTGTTCAGTCTGCCTTGATGATCTTGAGGTGGGGTCCCAGGCTAAACAAATGCCATGTGAACATAAGTTTCATTCTTCTTGTATCCTGCCATGGCTTGAATTACATAGTTCCTGCCCGGTTTGCCGGTTTGAGCTGCCTTCTGAGGAGACAAAAGACTTGAACGAGCCTAGCAACATTGGTAGAGTGGAGGACAGCCATGAGGAAGTCAGAGCTGATGGCCCTGGAAACGTCAGCGAGAGCAGTAACAGACCCTGGGCTATTGTTCCTTGGTTGAATGAGCTATTCTCAACTCGTGAGGCACAGAATGCTGGAGGTGTTTCTACGGATCAACAATCACCGCACACTTCTGGAACCAACCCAAATGCAGGGCACAGTTGATTTCTGCTGCTGTTGCGATTTGTGAATAATGATAGTACAAGTGACCCAGATTGGTAGAACTGTTGTTTTCCATACCTATCATCTCCCTTGGATGGATCACAGCATAGAAAGCTTGCCAGGCATTGTCATATCATCTGTGCTCATTTGCTTTGCTTCAGCTTACTGCAGCTAAAGTCGGTTCTGCATGTTGGGACATTGATTTCGTCTTGGCTCTGAGAATGGCACACCACTCATGTGTCATGATTGGCATATTCAGGAAGTGATGGTGTTAGCTAATTGCCAACCATCAGCCATAAATCAACTTCATTATTTATTACAAACAAGGCGTTACAGATTCTTGTAAAAATTCATGAGTAGGGAAGTGCAGCTAAGACTGAGTTTTTGAAGCAGTTGAAGTGTTGCCGAAATTTAAACATGTGGGTAAAAAGTCTACAGCTCTGGTAGTTTTACAACGTTGTTTTGATGGAATTTCTTCTATATATGGAGCTACTTCATGCTAAGATTATGTAAATTGTGATAATCTGCCATGGCTAACACTACTTATCCTTTCTTCGAAAGTGATTAAATTTCCTGAGATGTTGAGATGAACCTTTGTGGACTGGAATAATTTGTTTTTCTGCTTCATGAGATGTTCTGTTTGTCTGCTTACTTGTAACAACAGCCGCAAGTTTATTAATAATCTATCATCTAGCCCCTGGTTTATTAGGCGGTTTATATAT - >LOC_Os05g40980.1
GAGAGAAAAAAAATTGGTAGTAGTACGATAACCTCTAGGGATGGAGTAAAGTATCCAGCTTTGCAGCCACCTGCCCTCTGAACTTCTTGTTCTTCGTCTCACACTTCGCCCGAAGCAAACGAGAACAAGACGACCGCCTCTATCCAATCCAATATCCCAGTCCAATCGAAAGATTTGCGTTTTGATCGTGGTGCCGTCAACCGAAGGATTTGCAAGATGGCAGAAGCTGCAATCACAAGGTACTGGCCATGGTGGATGAGATCAAGTGCCCATCCTGTGGTGGCGGGTTCGTTGAAGAGATGACCGATGAGGAGATTGAGAGACTGACCAACAGGCAGCCAGAGCCGGGTTTCTCGCAATGGAACCCTATTGAGCATCCAGGAGAAACGATGGACAGCGACGATGAAGATAATGATTTAGGTCGTGAGTTTGAGGGTTTTATCAGGAGGCATCGACGGGCATCAACTCTACGACGCGTGCTTGACAGCATCCATGATGACCTTGCAGATGACCAAGAAAGGGACAGTTCCATTCTGATCAACGCCTTCAACCAAGCCCTCGCTCTGCAAGGCTCAGTGCTTGATCCTGATGAGGGCCAAGGTGACCAAGGCGGTTCAACAAATGATGATGGCTTACTGGAGGAGTATGTCCTCGGAGCAGGTCTGAGCCTGCTGCTTCAACATTTGGCTGAGAGCGACCCAAGTCGGAATGGTACCCCTCCTGCAAAGAAAGAGGCGGTTGAAGCGCTGCCCACTGTGAAAATCGAAGAGGTTGTCAGCTGTTCAGTCTGCCTTGATGATCTTGAGGTGGGGTCCCAGGCTAAACAAATGCCATGTGAACATAAGTTTCATTCTTCTTGTATCCTGCCATGGCTTGAATTACATAGTTCCTGCCCGGTTTGCCGGTTTGAGCTGCCTTCTGAGGAGACAAAAGACTTGAACGAGCCTAGCAACATTGGTAGAGTGGAGGACAGCCATGAGGAAGTCAGAGCTGATGGCCCTGGAAACGTCAGCGAGAGCAGTAACAGACCCTGGGCTATTGTTCCTTGGTTGAATGAGCTATTCTCAACTCGTGAGGCACAGAATGCTGGAGGTGTTTCTACGGATCAACAATCACCGCACACTTCTGGAACCAACCCAAATGCAGGGCACAGTTGATTTCTGCTGCTGTTGCGATTTGTGAATAATGATAGTACAAGTGACCCAGATTGGTAGAACTGTTGTTTTCCATACCTATCATCTCCCTTGGATGGATCACAGCATAGAAAGCTTGCCAGGCATTGTCATATCATCTGTGCTCATTTGCTTTGCTTCAGCTTACTGCAGCTAAAGTCGGTTCTGCATGTTGGGACATTGATTTCGTCTTGGCTCTGAGAATGGCACACCACTCATGTGTCATGATTGGCATATTCAGGAAGTGATGGTGTTAGCTAATTGCCAACCATCAGCCATAAATCAACTTCATTATTTATTACAAACAAGGCGTTACAGATTCTTGTAAAAATTCATGAGTAGGGAAGTGCAGCTAAGACTGAGTTTTTGAAGCAGTTGAAGTGTTGCCGAAATTTAAACATGTGGGTAAAAAGTCTACAGCTCTGGTAGTTTTACAACGTTGTTTTGATGGAATTTCTTCTATATATGGAGCTACTTCATGCTAAGATTATGTAAATTGTGATAATCTGCCATGGCTAACACTACTTATCCTTTCTTCGAAAGTGATTAAATTTCCTGAGATGTTGAGATGAACCTTTGTGGACTGGAATAATTTGTTTTTCTGCTTCATGAGATGTTCTGTTTGTCTGCTTACTTGTAACAACAGCCGCAAGTTTATTAATAATCTATCATCTAGCCCCTGGTTTATTAGGCGGTTTATATAT
CDS Sequence
- >LOC_Os05g40980.2
ATGGTGGATGAGATCAAGTGCCCATCCTGTGGTGGCGGGTTCGTTGAAGAGATGACCGATGAGGAGATTGAGAGACTGACCAACAGGCAGCCAGAGCCGGGTTTCTCGCAATGGAACCCTATTGAGCATCCAGGAGAAACGATGGACAGCGACGATGAAGATAATGATTTAGGTCGTGAGTTTGAGGGTTTTATCAGGAGGCATCGACGGGCATCAACTCTACGACGCGTGCTTGACAGCATCCATGATGACCTTGCAGATGACCAAGAAAGGGACAGTTCCATTCTGATCAACGCCTTCAACCAAGCCCTCGCTCTGCAAGGCTCAGTGCTTGATCCTGATGAGGGCCAAGGTGACCAAGGCGGTTCAACAAATGATGATGGCTTACTGGAGGAGTATGTCCTCGGAGCAGGTCTGAGCCTGCTGCTTCAACATTTGGCTGAGAGCGACCCAAGTCGGAATGGTACCCCTCCTGCAAAGAAAGAGGCGGTTGAAGCGCTGCCCACTGTGAAAATCGAAGAGGTTGTCAGCTGTTCAGTCTGCCTTGATGATCTTGAGGTGGGGTCCCAGGCTAAACAAATGCCATGTGAACATAAGTTTCATTCTTCTTGTATCCTGCCATGGCTTGAATTACATAGTTCCTGCCCGGTTTGCCGGTTTGAGCTGCCTTCTGAGGAGACAAAAGACTTGAACGAGCCTAGCAACATTGGTAGAGTGGAGGACAGCCATGAGGAAGTCAGAGCTGATGGCCCTGGAAACGTCAGCGAGAGCAGTAACAGACCCTGGGCTATTGTTCCTTGGTTGAATGAGCTATTCTCAACTCGTGAGGCACAGAATGCTGGAGGTGTTTCTACGGATCAACAATCACCGCACACTTCTGGAACCAACCCAAATGCAGGGCACAGTTGA - >LOC_Os05g40980.1
ATGGTGGATGAGATCAAGTGCCCATCCTGTGGTGGCGGGTTCGTTGAAGAGATGACCGATGAGGAGATTGAGAGACTGACCAACAGGCAGCCAGAGCCGGGTTTCTCGCAATGGAACCCTATTGAGCATCCAGGAGAAACGATGGACAGCGACGATGAAGATAATGATTTAGGTCGTGAGTTTGAGGGTTTTATCAGGAGGCATCGACGGGCATCAACTCTACGACGCGTGCTTGACAGCATCCATGATGACCTTGCAGATGACCAAGAAAGGGACAGTTCCATTCTGATCAACGCCTTCAACCAAGCCCTCGCTCTGCAAGGCTCAGTGCTTGATCCTGATGAGGGCCAAGGTGACCAAGGCGGTTCAACAAATGATGATGGCTTACTGGAGGAGTATGTCCTCGGAGCAGGTCTGAGCCTGCTGCTTCAACATTTGGCTGAGAGCGACCCAAGTCGGAATGGTACCCCTCCTGCAAAGAAAGAGGCGGTTGAAGCGCTGCCCACTGTGAAAATCGAAGAGGTTGTCAGCTGTTCAGTCTGCCTTGATGATCTTGAGGTGGGGTCCCAGGCTAAACAAATGCCATGTGAACATAAGTTTCATTCTTCTTGTATCCTGCCATGGCTTGAATTACATAGTTCCTGCCCGGTTTGCCGGTTTGAGCTGCCTTCTGAGGAGACAAAAGACTTGAACGAGCCTAGCAACATTGGTAGAGTGGAGGACAGCCATGAGGAAGTCAGAGCTGATGGCCCTGGAAACGTCAGCGAGAGCAGTAACAGACCCTGGGCTATTGTTCCTTGGTTGAATGAGCTATTCTCAACTCGTGAGGCACAGAATGCTGGAGGTGTTTCTACGGATCAACAATCACCGCACACTTCTGGAACCAACCCAAATGCAGGGCACAGTTGA
Protein Sequence
- >LOC_Os05g40980.2
MVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEPGFSQWNPIEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSILINAFNQALALQGSVLDPDEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETKDLNEPSNIGRVEDSHEEVRADGPGNVSESSNRPWAIVPWLNELFSTREAQNAGGVSTDQQSPHTSGTNPNAGHS* - >LOC_Os05g40980.1
MVDEIKCPSCGGGFVEEMTDEEIERLTNRQPEPGFSQWNPIEHPGETMDSDDEDNDLGREFEGFIRRHRRASTLRRVLDSIHDDLADDQERDSSILINAFNQALALQGSVLDPDEGQGDQGGSTNDDGLLEEYVLGAGLSLLLQHLAESDPSRNGTPPAKKEAVEALPTVKIEEVVSCSVCLDDLEVGSQAKQMPCEHKFHSSCILPWLELHSSCPVCRFELPSEETKDLNEPSNIGRVEDSHEEVRADGPGNVSESSNRPWAIVPWLNELFSTREAQNAGGVSTDQQSPHTSGTNPNAGHS*