Gene Details:

Functional Descriptions:

  • The expression profiles of OsZIP5 and OsZIP9 overlap in the root epidermis and respond to the local Zn status in the root.
  • The decreased Zn/Cd levels and growth retardation in the oszip5 mutant are less severe than in the OsZIP9 mutant.
  • However, OsZIP9 is also regulated by systemic signals of Zn status from the shoot.
  • The ZIP transporter family member OsZIP9 contributes to root Zn uptake in rice under Zn-limited conditions.
  • Furthermore, OsZIP9 was expressed in the exodermis and endodermis of root mature regions.
  • For plants grown in a hydroponic solution with low Zn concentration, knockout of OsZIP9 significantly reduced plant growth, which was accompanied by decreased Zn concentrations in both the root and shoot.
  • Combined, these results indicate that OsZIP9 localized at the root exodermis and endodermis functions as an influx transporter of Zn and contributes to Zn uptake under Zn-limited conditions in rice.
  • Expression pattern analysis showed that OsZIP9 was mainly expressed in the roots throughout all growth stages and its expression was up-regulated by Zn-deficiency.
  • OsZIP9 was mainly localized to the plasma membrane and showed transport activity for Zn in yeast.
  • Taken together, these results show that OsZIP9 is an important influx transporter responsible for uptake of Zn and Co from external media into root cells.
  • OsZIP9 knockout rice plants showed a significant reduction in growth at low Zn concentration, but could be rescued by high Zn supply.
  • Natural variation of OsZIP9 expression level is highly associated with Zn content in milled grain among rice varieties in the germplasm collection.
  • A high activity zinc transporter OsZIP9 mediates zinc uptake in rice.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os05g39540.2
    ATTGGTTGTTCGATCATCACCAATCTTTGGCCACAGGCTAAAAAGATGGCTTTCGATCTCAAGCTAACCGCATGCCTCCTCCTCGCCGTCTTCTCCCTCGCCGCCGCCGCCGACTGCGAGTGCCAGCCCAGCGACGAAGGCCACGACGCGGCCAAGTCCCGGACGCTCAAGGTCATCGCCATCTTCTGCATCCTCGTGGGCAGCTCAGCGGGGTGCGCCATTCCGTCGCTCGGCCGGAGGTTCCCGGCGCTCCGCCCGGACACGAGCCTCTTCTTCGCCCTCAAGGCGTTCGCCGCCGGCGTCATCCTCGCCACGGCGTTCGTGCACATCCTCCCGGTGTCCTTCGACAAGCTCGGCTCGCCGTGCCTCGTGGACGGGCCGTGGCGGAAGTACCCGTTCACGGGGCTCGTCGCCATGCTCGCCGCCGTGGCCACGCTCCTCCTCGACACGATCGCCACGGGCTACTTCCTGCAGCGCGCGCAGGACAGCCGCGGCGCCGTCGCCGCCGTCGCCGCGTGCGGCGGGGACGCGTCGTCGTCGCACGACCACGAGCGCGGGAACGCGCACGGCGTGTCGTCGGCCGTGATCGCGTCGGCGACGATGCCGAACGACGCCGCCGACGACTGCGACGACGCCGAGGACCGCGCGAAGCTCGTCCGCCACCGCGTCATCTCACAGGTGTTTGAGCTGGGTATCATAGTGCATTCGATTATCATCGGGATATCACTAGGTGCATCCGAGAGCCCAAGCACGATCAGACCGCTCGTGGCCGCGTTAACATTTCATCAGTTCTTCGAAGGGATAGGGCTGGGAGGATGCATTGTTCAGTTCTCTCACCGTGGGCATGGCGCGTGAGATCTCGCTGGCGCCGACGGCGGCGGTTGCGGCGGCGAAGCCGGTGGCGGCACCTGCTCGCGTCCGCCGACGGCGGCAGCTCCACCTCTTCAGTGTCGCCACCGATGCACACGAGGTCAGTGCGGGAGAGCGGCGTGAGCGTGGTGGTGGTAGTTCCACCTCTTCAGTGTCGCCGCCGATGCACACGAGGTCAGTGCGGGAGAGCGGCGTGAGCGTGGTGGTGGCAGCTCCACCTCTTCAGTGTCGCCGCCGATGCACATGAGGTCAATGCGGGAGAGCGGCGTGAGCGTGGTGGTGGCGCCGACGCCGACACCCACCGCGTTTTCTTTGGTTGACGGTCTCCATCAACAGGAGGTTCTTCATTTTCTTGCTCTAAGCAGTGTCAGACGATACATCGATCGAATCAAATGATATGAACTTATCCATGTCCACTCCATGTACATATATTTGATCTGGAAGTTGACGGAAGCA
  • >LOC_Os05g39540.1
    ATTGGTTGTTCGATCATCACCAATCTTTGGCCACAGGCTAAAAAGATGGCTTTCGATCTCAAGCTAACCGCATGCCTCCTCCTCGCCGTCTTCTCCCTCGCCGCCGCCGCCGACTGCGAGTGCCAGCCCAGCGACGAAGGCCACGACGCGGCCAAGTCCCGGACGCTCAAGGTCATCGCCATCTTCTGCATCCTCGTGGGCAGCTCAGCGGGGTGCGCCATTCCGTCGCTCGGCCGGAGGTTCCCGGCGCTCCGCCCGGACACGAGCCTCTTCTTCGCCCTCAAGGCGTTCGCCGCCGGCGTCATCCTCGCCACGGCGTTCGTGCACATCCTCCCGGTGTCCTTCGACAAGCTCGGCTCGCCGTGCCTCGTGGACGGGCCGTGGCGGAAGTACCCGTTCACGGGGCTCGTCGCCATGCTCGCCGCCGTGGCCACGCTCCTCCTCGACACGATCGCCACGGGCTACTTCCTGCAGCGCGCGCAGGACAGCCGCGGCGCCGTCGCCGCCGTCGCCGCGTGCGGCGGGGACGCGTCGTCGTCGCACGACCACGAGCGCGGGAACGCGCACGGCGTGTCGTCGGCCGTGATCGCGTCGGCGACGATGCCGAACGACGCCGCCGACGACTGCGACGACGCCGAGGACCGCGCGAAGCTCGTCCGCCACCGCGTCATCTCACAGGTGTTTGAGCTGGGTATCATAGTGCATTCGATTATCATCGGGATATCACTAGGTGCATCCGAGAGCCCAAGCACGATCAGACCGCTCGTGGCCGCGTTAACATTTCATCAGTTCTTCGAAGGGATAGGGCTGGGAGGATGCATTGTTCAGTTCTCTCACCGTGGGCATGGCGCGTGAGATCTCGCTGGCGCCGACGGCGGCGGTTGCGGCGGCGAAGCCGGTGGCGGCACCTGCTCGCGTCCGCCGACGGCGGCAGCTCCACCTCTTCAGTGTCGCCACCGATGCACACGAGGTCAGTGCGGGAGAGCGGCGTGAGCGTGGTGGTGGTAGTTCCACCTCTTCAGTGTCGCCGCCGATGCACACGAGGTCAGTGCGGGAGAGCGGCGTGAGCGTGGTGGTGGCAGCTCCACCTCTTCAGTGTCGCCGCCGATGCACATGAGGTCAATGCGGGAGAGCGGCGTGAGCGTGGTGGTGGCGCCGACGCCGACACCCACCGCGTTTTCTTTGGTTGACGGTCTCCATCAACAGGAGGTTCTTCATTTTCTTGCTCTAAGCAGTGTCAGACGATACATCGATCGAATCAAATGATATGAACTTATCCATGTCCACTCCATGTACATATATTTGATCTGGAAGTTGACGGAAGCA
CDS Sequence
  • >LOC_Os05g39540.2
    ATGGCTTTCGATCTCAAGCTAACCGCATGCCTCCTCCTCGCCGTCTTCTCCCTCGCCGCCGCCGCCGACTGCGAGTGCCAGCCCAGCGACGAAGGCCACGACGCGGCCAAGTCCCGGACGCTCAAGGTCATCGCCATCTTCTGCATCCTCGTGGGCAGCTCAGCGGGGTGCGCCATTCCGTCGCTCGGCCGGAGGTTCCCGGCGCTCCGCCCGGACACGAGCCTCTTCTTCGCCCTCAAGGCGTTCGCCGCCGGCGTCATCCTCGCCACGGCGTTCGTGCACATCCTCCCGGTGTCCTTCGACAAGCTCGGCTCGCCGTGCCTCGTGGACGGGCCGTGGCGGAAGTACCCGTTCACGGGGCTCGTCGCCATGCTCGCCGCCGTGGCCACGCTCCTCCTCGACACGATCGCCACGGGCTACTTCCTGCAGCGCGCGCAGGACAGCCGCGGCGCCGTCGCCGCCGTCGCCGCGTGCGGCGGGGACGCGTCGTCGTCGCACGACCACGAGCGCGGGAACGCGCACGGCGTGTCGTCGGCCGTGATCGCGTCGGCGACGATGCCGAACGACGCCGCCGACGACTGCGACGACGCCGAGGACCGCGCGAAGCTCGTCCGCCACCGCGTCATCTCACAGGTGTTTGAGCTGGGTATCATAGTGCATTCGATTATCATCGGGATATCACTAGGTGCATCCGAGAGCCCAAGCACGATCAGACCGCTCGTGGCCGCGTTAACATTTCATCAGTTCTTCGAAGGGATAGGGCTGGGAGGATGCATTGTTCAGTTCTCTCACCGTGGGCATGGCGCGTGA
  • >LOC_Os05g39540.1
    ATGGCTTTCGATCTCAAGCTAACCGCATGCCTCCTCCTCGCCGTCTTCTCCCTCGCCGCCGCCGCCGACTGCGAGTGCCAGCCCAGCGACGAAGGCCACGACGCGGCCAAGTCCCGGACGCTCAAGGTCATCGCCATCTTCTGCATCCTCGTGGGCAGCTCAGCGGGGTGCGCCATTCCGTCGCTCGGCCGGAGGTTCCCGGCGCTCCGCCCGGACACGAGCCTCTTCTTCGCCCTCAAGGCGTTCGCCGCCGGCGTCATCCTCGCCACGGCGTTCGTGCACATCCTCCCGGTGTCCTTCGACAAGCTCGGCTCGCCGTGCCTCGTGGACGGGCCGTGGCGGAAGTACCCGTTCACGGGGCTCGTCGCCATGCTCGCCGCCGTGGCCACGCTCCTCCTCGACACGATCGCCACGGGCTACTTCCTGCAGCGCGCGCAGGACAGCCGCGGCGCCGTCGCCGCCGTCGCCGCGTGCGGCGGGGACGCGTCGTCGTCGCACGACCACGAGCGCGGGAACGCGCACGGCGTGTCGTCGGCCGTGATCGCGTCGGCGACGATGCCGAACGACGCCGCCGACGACTGCGACGACGCCGAGGACCGCGCGAAGCTCGTCCGCCACCGCGTCATCTCACAGGTGTTTGAGCTGGGTATCATAGTGCATTCGATTATCATCGGGATATCACTAGGTGCATCCGAGAGCCCAAGCACGATCAGACCGCTCGTGGCCGCGTTAACATTTCATCAGTTCTTCGAAGGGATAGGGCTGGGAGGATGCATTGTTCAGTTCTCTCACCGTGGGCATGGCGCGTGA
Protein Sequence
  • >LOC_Os05g39540.2
    MAFDLKLTACLLLAVFSLAAAADCECQPSDEGHDAAKSRTLKVIAIFCILVGSSAGCAIPSLGRRFPALRPDTSLFFALKAFAAGVILATAFVHILPVSFDKLGSPCLVDGPWRKYPFTGLVAMLAAVATLLLDTIATGYFLQRAQDSRGAVAAVAACGGDASSSHDHERGNAHGVSSAVIASATMPNDAADDCDDAEDRAKLVRHRVISQVFELGIIVHSIIIGISLGASESPSTIRPLVAALTFHQFFEGIGLGGCIVQFSHRGHGA*
  • >LOC_Os05g39540.1
    MAFDLKLTACLLLAVFSLAAAADCECQPSDEGHDAAKSRTLKVIAIFCILVGSSAGCAIPSLGRRFPALRPDTSLFFALKAFAAGVILATAFVHILPVSFDKLGSPCLVDGPWRKYPFTGLVAMLAAVATLLLDTIATGYFLQRAQDSRGAVAAVAACGGDASSSHDHERGNAHGVSSAVIASATMPNDAADDCDDAEDRAKLVRHRVISQVFELGIIVHSIIIGISLGASESPSTIRPLVAALTFHQFFEGIGLGGCIVQFSHRGHGA*