Gene Details:
- MSU gene ID: LOC_Os05g39540
- RAPdb gene ID: Os05g0472400 ,Os05g0472500
- Gene Symbol: OsZIP9
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The expression profiles of OsZIP5 and OsZIP9 overlap in the root epidermis and respond to the local Zn status in the root.
- The decreased Zn/Cd levels and growth retardation in the oszip5 mutant are less severe than in the OsZIP9 mutant.
- However, OsZIP9 is also regulated by systemic signals of Zn status from the shoot.
- The ZIP transporter family member OsZIP9 contributes to root Zn uptake in rice under Zn-limited conditions.
- Furthermore, OsZIP9 was expressed in the exodermis and endodermis of root mature regions.
- For plants grown in a hydroponic solution with low Zn concentration, knockout of OsZIP9 significantly reduced plant growth, which was accompanied by decreased Zn concentrations in both the root and shoot.
- Combined, these results indicate that OsZIP9 localized at the root exodermis and endodermis functions as an influx transporter of Zn and contributes to Zn uptake under Zn-limited conditions in rice.
- Expression pattern analysis showed that OsZIP9 was mainly expressed in the roots throughout all growth stages and its expression was up-regulated by Zn-deficiency.
- OsZIP9 was mainly localized to the plasma membrane and showed transport activity for Zn in yeast.
- Taken together, these results show that OsZIP9 is an important influx transporter responsible for uptake of Zn and Co from external media into root cells.
- OsZIP9 knockout rice plants showed a significant reduction in growth at low Zn concentration, but could be rescued by high Zn supply.
- Natural variation of OsZIP9 expression level is highly associated with Zn content in milled grain among rice varieties in the germplasm collection.
- A high activity zinc transporter OsZIP9 mediates zinc uptake in rice.
Function-related keywords:
- root , growth , shoot , epidermis , plant-growth , transporter , plasma-membrane , grain , zinc
Literature:
- ZINC TRANSPORTER5 and ZINC TRANSPORTER9 Function Synergistically in Zinc/Cadmium Uptake . DOI: 10.1104/pp.19.01569 ; PMID: 32341004
- The ZIP Transporter Family Member OsZIP9 Contributes To Root Zinc Uptake in Rice under Zinc-Limited Conditions . DOI: 10.1104/pp.20.00125 ; PMID: 32371522
- A high activity zinc transporter OsZIP9 mediates zinc uptake in rice . DOI: 10.1111/tpj.14855 ; PMID: 32449251
- Comparative transcriptome profile analysis of rice varieties with different tolerance to zinc deficiency . DOI: 10.1111/plb.13227 ; PMID: 33296551
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g39540.2
ATTGGTTGTTCGATCATCACCAATCTTTGGCCACAGGCTAAAAAGATGGCTTTCGATCTCAAGCTAACCGCATGCCTCCTCCTCGCCGTCTTCTCCCTCGCCGCCGCCGCCGACTGCGAGTGCCAGCCCAGCGACGAAGGCCACGACGCGGCCAAGTCCCGGACGCTCAAGGTCATCGCCATCTTCTGCATCCTCGTGGGCAGCTCAGCGGGGTGCGCCATTCCGTCGCTCGGCCGGAGGTTCCCGGCGCTCCGCCCGGACACGAGCCTCTTCTTCGCCCTCAAGGCGTTCGCCGCCGGCGTCATCCTCGCCACGGCGTTCGTGCACATCCTCCCGGTGTCCTTCGACAAGCTCGGCTCGCCGTGCCTCGTGGACGGGCCGTGGCGGAAGTACCCGTTCACGGGGCTCGTCGCCATGCTCGCCGCCGTGGCCACGCTCCTCCTCGACACGATCGCCACGGGCTACTTCCTGCAGCGCGCGCAGGACAGCCGCGGCGCCGTCGCCGCCGTCGCCGCGTGCGGCGGGGACGCGTCGTCGTCGCACGACCACGAGCGCGGGAACGCGCACGGCGTGTCGTCGGCCGTGATCGCGTCGGCGACGATGCCGAACGACGCCGCCGACGACTGCGACGACGCCGAGGACCGCGCGAAGCTCGTCCGCCACCGCGTCATCTCACAGGTGTTTGAGCTGGGTATCATAGTGCATTCGATTATCATCGGGATATCACTAGGTGCATCCGAGAGCCCAAGCACGATCAGACCGCTCGTGGCCGCGTTAACATTTCATCAGTTCTTCGAAGGGATAGGGCTGGGAGGATGCATTGTTCAGTTCTCTCACCGTGGGCATGGCGCGTGAGATCTCGCTGGCGCCGACGGCGGCGGTTGCGGCGGCGAAGCCGGTGGCGGCACCTGCTCGCGTCCGCCGACGGCGGCAGCTCCACCTCTTCAGTGTCGCCACCGATGCACACGAGGTCAGTGCGGGAGAGCGGCGTGAGCGTGGTGGTGGTAGTTCCACCTCTTCAGTGTCGCCGCCGATGCACACGAGGTCAGTGCGGGAGAGCGGCGTGAGCGTGGTGGTGGCAGCTCCACCTCTTCAGTGTCGCCGCCGATGCACATGAGGTCAATGCGGGAGAGCGGCGTGAGCGTGGTGGTGGCGCCGACGCCGACACCCACCGCGTTTTCTTTGGTTGACGGTCTCCATCAACAGGAGGTTCTTCATTTTCTTGCTCTAAGCAGTGTCAGACGATACATCGATCGAATCAAATGATATGAACTTATCCATGTCCACTCCATGTACATATATTTGATCTGGAAGTTGACGGAAGCA - >LOC_Os05g39540.1
ATTGGTTGTTCGATCATCACCAATCTTTGGCCACAGGCTAAAAAGATGGCTTTCGATCTCAAGCTAACCGCATGCCTCCTCCTCGCCGTCTTCTCCCTCGCCGCCGCCGCCGACTGCGAGTGCCAGCCCAGCGACGAAGGCCACGACGCGGCCAAGTCCCGGACGCTCAAGGTCATCGCCATCTTCTGCATCCTCGTGGGCAGCTCAGCGGGGTGCGCCATTCCGTCGCTCGGCCGGAGGTTCCCGGCGCTCCGCCCGGACACGAGCCTCTTCTTCGCCCTCAAGGCGTTCGCCGCCGGCGTCATCCTCGCCACGGCGTTCGTGCACATCCTCCCGGTGTCCTTCGACAAGCTCGGCTCGCCGTGCCTCGTGGACGGGCCGTGGCGGAAGTACCCGTTCACGGGGCTCGTCGCCATGCTCGCCGCCGTGGCCACGCTCCTCCTCGACACGATCGCCACGGGCTACTTCCTGCAGCGCGCGCAGGACAGCCGCGGCGCCGTCGCCGCCGTCGCCGCGTGCGGCGGGGACGCGTCGTCGTCGCACGACCACGAGCGCGGGAACGCGCACGGCGTGTCGTCGGCCGTGATCGCGTCGGCGACGATGCCGAACGACGCCGCCGACGACTGCGACGACGCCGAGGACCGCGCGAAGCTCGTCCGCCACCGCGTCATCTCACAGGTGTTTGAGCTGGGTATCATAGTGCATTCGATTATCATCGGGATATCACTAGGTGCATCCGAGAGCCCAAGCACGATCAGACCGCTCGTGGCCGCGTTAACATTTCATCAGTTCTTCGAAGGGATAGGGCTGGGAGGATGCATTGTTCAGTTCTCTCACCGTGGGCATGGCGCGTGAGATCTCGCTGGCGCCGACGGCGGCGGTTGCGGCGGCGAAGCCGGTGGCGGCACCTGCTCGCGTCCGCCGACGGCGGCAGCTCCACCTCTTCAGTGTCGCCACCGATGCACACGAGGTCAGTGCGGGAGAGCGGCGTGAGCGTGGTGGTGGTAGTTCCACCTCTTCAGTGTCGCCGCCGATGCACACGAGGTCAGTGCGGGAGAGCGGCGTGAGCGTGGTGGTGGCAGCTCCACCTCTTCAGTGTCGCCGCCGATGCACATGAGGTCAATGCGGGAGAGCGGCGTGAGCGTGGTGGTGGCGCCGACGCCGACACCCACCGCGTTTTCTTTGGTTGACGGTCTCCATCAACAGGAGGTTCTTCATTTTCTTGCTCTAAGCAGTGTCAGACGATACATCGATCGAATCAAATGATATGAACTTATCCATGTCCACTCCATGTACATATATTTGATCTGGAAGTTGACGGAAGCA
CDS Sequence
- >LOC_Os05g39540.2
ATGGCTTTCGATCTCAAGCTAACCGCATGCCTCCTCCTCGCCGTCTTCTCCCTCGCCGCCGCCGCCGACTGCGAGTGCCAGCCCAGCGACGAAGGCCACGACGCGGCCAAGTCCCGGACGCTCAAGGTCATCGCCATCTTCTGCATCCTCGTGGGCAGCTCAGCGGGGTGCGCCATTCCGTCGCTCGGCCGGAGGTTCCCGGCGCTCCGCCCGGACACGAGCCTCTTCTTCGCCCTCAAGGCGTTCGCCGCCGGCGTCATCCTCGCCACGGCGTTCGTGCACATCCTCCCGGTGTCCTTCGACAAGCTCGGCTCGCCGTGCCTCGTGGACGGGCCGTGGCGGAAGTACCCGTTCACGGGGCTCGTCGCCATGCTCGCCGCCGTGGCCACGCTCCTCCTCGACACGATCGCCACGGGCTACTTCCTGCAGCGCGCGCAGGACAGCCGCGGCGCCGTCGCCGCCGTCGCCGCGTGCGGCGGGGACGCGTCGTCGTCGCACGACCACGAGCGCGGGAACGCGCACGGCGTGTCGTCGGCCGTGATCGCGTCGGCGACGATGCCGAACGACGCCGCCGACGACTGCGACGACGCCGAGGACCGCGCGAAGCTCGTCCGCCACCGCGTCATCTCACAGGTGTTTGAGCTGGGTATCATAGTGCATTCGATTATCATCGGGATATCACTAGGTGCATCCGAGAGCCCAAGCACGATCAGACCGCTCGTGGCCGCGTTAACATTTCATCAGTTCTTCGAAGGGATAGGGCTGGGAGGATGCATTGTTCAGTTCTCTCACCGTGGGCATGGCGCGTGA - >LOC_Os05g39540.1
ATGGCTTTCGATCTCAAGCTAACCGCATGCCTCCTCCTCGCCGTCTTCTCCCTCGCCGCCGCCGCCGACTGCGAGTGCCAGCCCAGCGACGAAGGCCACGACGCGGCCAAGTCCCGGACGCTCAAGGTCATCGCCATCTTCTGCATCCTCGTGGGCAGCTCAGCGGGGTGCGCCATTCCGTCGCTCGGCCGGAGGTTCCCGGCGCTCCGCCCGGACACGAGCCTCTTCTTCGCCCTCAAGGCGTTCGCCGCCGGCGTCATCCTCGCCACGGCGTTCGTGCACATCCTCCCGGTGTCCTTCGACAAGCTCGGCTCGCCGTGCCTCGTGGACGGGCCGTGGCGGAAGTACCCGTTCACGGGGCTCGTCGCCATGCTCGCCGCCGTGGCCACGCTCCTCCTCGACACGATCGCCACGGGCTACTTCCTGCAGCGCGCGCAGGACAGCCGCGGCGCCGTCGCCGCCGTCGCCGCGTGCGGCGGGGACGCGTCGTCGTCGCACGACCACGAGCGCGGGAACGCGCACGGCGTGTCGTCGGCCGTGATCGCGTCGGCGACGATGCCGAACGACGCCGCCGACGACTGCGACGACGCCGAGGACCGCGCGAAGCTCGTCCGCCACCGCGTCATCTCACAGGTGTTTGAGCTGGGTATCATAGTGCATTCGATTATCATCGGGATATCACTAGGTGCATCCGAGAGCCCAAGCACGATCAGACCGCTCGTGGCCGCGTTAACATTTCATCAGTTCTTCGAAGGGATAGGGCTGGGAGGATGCATTGTTCAGTTCTCTCACCGTGGGCATGGCGCGTGA
Protein Sequence
- >LOC_Os05g39540.2
MAFDLKLTACLLLAVFSLAAAADCECQPSDEGHDAAKSRTLKVIAIFCILVGSSAGCAIPSLGRRFPALRPDTSLFFALKAFAAGVILATAFVHILPVSFDKLGSPCLVDGPWRKYPFTGLVAMLAAVATLLLDTIATGYFLQRAQDSRGAVAAVAACGGDASSSHDHERGNAHGVSSAVIASATMPNDAADDCDDAEDRAKLVRHRVISQVFELGIIVHSIIIGISLGASESPSTIRPLVAALTFHQFFEGIGLGGCIVQFSHRGHGA* - >LOC_Os05g39540.1
MAFDLKLTACLLLAVFSLAAAADCECQPSDEGHDAAKSRTLKVIAIFCILVGSSAGCAIPSLGRRFPALRPDTSLFFALKAFAAGVILATAFVHILPVSFDKLGSPCLVDGPWRKYPFTGLVAMLAAVATLLLDTIATGYFLQRAQDSRGAVAAVAACGGDASSSHDHERGNAHGVSSAVIASATMPNDAADDCDDAEDRAKLVRHRVISQVFELGIIVHSIIIGISLGASESPSTIRPLVAALTFHQFFEGIGLGGCIVQFSHRGHGA*