Information report for SPR9
Gene Details
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Functional Descriptions
- SPR9 encodes a 60 S ribosomal protein that modulates panicle spreading and affects resistance to false smut in rice (Oryza sativa. L).
- Interestingly, the SPR9 mutant was found to improve resistance to RFS without affecting major agronomic traits.
- Taken together, our results revealed that the SPR9 allele has good application prospects in rice breeding for disease resistance and panicle improvement.
- Knockout experiments showed that the SPR9 gene is responsible for the spreading panicle phenotype of the SPR9 mutant.
Functional Keywords
Literature and News
- NA .
Gene Resources
- UniProt: Q6L510
- EMBL: AK058918, AP014961
- AlphaFoldDB: Q6L510
- EnsemblPlants: Os05t0459900-01
- Gramene: Os05t0459900-01
- KEGG: osa:4339011
- Orthologous matrix: NKGHKTE
Sequences
cDNA Sequence
- >LOC_Os05g38520.1
GGTTTCCTCCCTAGCCGCCGCCGCTTCATTTCTCCCAGGTAAGGAAAAAGGGCTCCCCGATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAGAGTATCTCCAAGTTCATGAAGTCCATGGCAATATTGTCTTGTTGAGTTTACTCTTGTAGAACCCTACTACTAGAATTGCACTCTATTATCCAGCTAAACATCATGGTGTTAGTTCTGTGTTAAAAACCTCCTGTCTTGTGTTTTTGATCCTTTCAATGCATGGTTTGCCACCTTAAATTTGCTTGATTAGTTACTTTTGCCGCTGGTACTGATGCGCTGAGGGCGACATGCTTGGGGACTATACTCCCCAGTCTTTATTTTGTAGCTTAGGGTGTATTTCGCTTGCAGCGTCGTGCTGGATCCAATCTTTATTTTCGCGATT - >LOC_Os05g38520.2
GGTTTCCTCCCTAGCCGCCGCCGCTTCATTTCTCCCAGGTAAGGAAAAAGGGCTCCCCGATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAGAGTATCTCCAAGTTCATGAAGTCCATGGCAATATTGTCTTGTTGAGTTTACTCTTGTAGAACCCTACTACTAGAATTGCACTCTATTATCCAGCTAAACATCATGGTGTTAGTTCTGTGTTAAAAACCTCCTGTCTTGTGTTTTTGATCCTTTCAATGCATGGTTTGCCACCTTAAATTTGCTTGATTAGTTACTTTTGCCGCTGGTACTGATGCGCTGAGGGCGACATGCTTGGGGACTATACTCCCCAGTCTTTATTTTGTAGCTTAGGGTGTATTTCGCTTGCAGCGTCGTGCTGGATCCAATCTTTATTTTCGCGATT - >LOC_Os05g38520.3
GGTTTCCTCCCTAGCCGCCGCCGCTTCATTTCTCCCAGGTAAGGAAAAAGGGCTCCCCGATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAGAGTATCTCCAAGTTCATGAAGTCCATGGCAATATTGTCTTGTTGAGTTTACTCTTGTAGAACCCTACTACTAGAATTGCACTCTATTATCCAGCTAAACATCATGGTGTTAGTTCTGTGTTAAAAACCTCCTGTCTTGTGTTTTTGATCCTTTCAATGCATGGTTTGCCACCTTAAATTTGCTTGATTAGTTACTTTTGCCGCTGGTACTGATGCGCTGAGGGCGACATGCTTGGGGACTATACTCCCCAGTCTTTATTTTGTAGCTTAGGGTGTATTTCGCTTGCAGCGTCGTGCTGGATCCAATCTTTATTTTCGCGATT - >LOC_Os05g38520.4
GGTTTCCTCCCTAGCCGCCGCCGCTTCATTTCTCCCAGGTAAGGAAAAAGGGCTCCCCGATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAGAGTATCTCCAAGTTCATGAAGTCCATGGCAATATTGTCTTGTTGAGTTTACTCTTGTAGAACCCTACTACTAGAATTGCACTCTATTATCCAGCTAAACATCATGGTGTTAGTTCTGTGTTAAAAACCTCCTGTCTTGTGTTTTTGATCCTTTCAATGCATGGTTTGCCACCTTAAATTTGCTTGATTAGTTACTTTTGCCGCTGGTACTGATGCGCTGAGGGCGACATGCTTGGGGACTATACTCCCCAGTCTTTATTTTGTAGCTTAGGGTGTATTTCGCTTGCAGCGTCGTGCTGGATCCAATCTTTATTTTCGCGATT
CDS Sequence
- >LOC_Os05g38520.1
ATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAG - >LOC_Os05g38520.2
ATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAG - >LOC_Os05g38520.3
ATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAG - >LOC_Os05g38520.4
ATGGCGCCGTCGCAGCCGAAGTCCGGGCTCTTCGTGGGCATCAACAAGGGCCACGTCGTCACCAAGCGCGAGCTGCCGCCTCGCCCGTCCGACCGCAAGGGGAAATCCACCAAGAGGGTGACCTTTGTCAGGAACTTGATCAGGGAGGTTGCTGGATTTGCTCCCTATGAGAAGCGTATCACTGAGCTTCTCAAAGTTGGCAAGGACAAGCGTGCACTGAAGGTGGCAAAGAGAAAGCTTGGCACCCACAAGAGGGCCAAGAAGAAGAGAGAGGAGATGGCTGGTGTCCTCAGGAAGATGAGGTCTGGTGGCGGTCACGCTCACACCGAGAAGAAGAAATAG
Protein Sequence
- >LOC_Os05g38520.1
MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMRSGGGHAHTEKKK* - >LOC_Os05g38520.2
MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMRSGGGHAHTEKKK* - >LOC_Os05g38520.3
MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMRSGGGHAHTEKKK* - >LOC_Os05g38520.4
MAPSQPKSGLFVGINKGHVVTKRELPPRPSDRKGKSTKRVTFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMAGVLRKMRSGGGHAHTEKKK*