Gene Details:
- MSU gene ID: LOC_Os05g34940
- RAPdb gene ID: Os05g0423400
- Gene Symbol: OsMADS4
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The global architecture of transcripts regulated by OsMADS2 gives insights into the regulation of cell division and vascular differentiation that together can form this highly modified grass organ with important functions in floret opening and stamen emergence independent of the paralogous gene OsMADS4.
- Our results demonstrate that OsMADS16 is an AP3/DEF orthologue to specify the identities of lodicules and stamens in rice flower and also support that OsMADS4 is a PI orthologue.
- Transcription of a rice PI homologous gene, OsMADS4, was also reduced remarkably in the transgenic plants.
- Consistent with the mutant floral phenotype, DDF1 positively regulates B-class genes OsMADS4 and OsMADS16, and negatively regulates pistil specification gene DL.
- Unequal genetic redundancy of rice PISTILLATA orthologs, OsMADS2 and OsMADS4, in lodicule and stamen development.
- Our data demonstrate its essential role in lodicule development and implicate the second PI/GLO paralog, OsMADS4, to suffice for stamen specification.
Function-related keywords:
- stamen , cell-division , flower , pi , floral , architecture
Literature:
- Functional analysis of the rice AP3 homologue OsMADS16 by RNA interference . DOI: 10.1023/a:1025401611354 ; PMID: 14558657
- Double-stranded RNA interference of a rice PI/GLO paralog, OsMADS2, uncovers its second-whorl-specific function in floral organ patterning . DOI: 10.1093/genetics/165.4.2301 ; PMID: 14704206
- MADS-box gene family in rice: genome-wide identification, organization and expression profiling during reproductive development and stress . DOI: 10.1186/1471-2164-8-242 ; PMID: 17640358
- Divergent regulatory OsMADS2 functions control size, shape and differentiation of the highly derived rice floret second-whorl organ . DOI: 10.1534/genetics.107.071746 ; PMID: 17409064
- Unequal genetic redundancy of rice PISTILLATA orthologs, OsMADS2 and OsMADS4, in lodicule and stamen development . DOI: 10.1093/pcp/pcn050 ; PMID: 18378529
- Dwarf and deformed flower 1, encoding an F-box protein, is critical for vegetative and floral development in rice (Oryza sativa L.) . DOI: 10.1111/j.1365-313X.2012.05126.x ; PMID: 22897567
- Alteration of floral organ identity in rice through ectopic expression of OsMADS16 . DOI: 10.1007/s00425-003-1066-8 ; PMID: 12905025
- Rice transcription factor MADS32 regulates floral patterning through interactions with multiple floral homeotic genes . DOI: 10.1093/jxb/eraa588 ; PMID: 33337484
Related News:
Gene Resources:
- NCBI ID: AK100233
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os05g34940.2
CTCCACTCCAACCATGGCGTCCAGTCGTCCACACCCCCCACCATCCCCACCTTAAAGACCGGAAGAACGGCAACTCCCCAACCCTCTTGTTTCTTCGAGAGCGAGGTGAAGATTTGTTTCTTGGTTTGTGTTCTTGGAGTGGAGGAGGAGGAGGAGTTGGATATGGGGCGCGGCAAGATCGAGATCAAGAGGATCGAGAACTCGACGAACCGGCAGGTGACGTTCTCGAAGCGCCGCGCCGGGATACTCAAGAAGGCCCGCGAGATCGGCGTGCTCTGCGACGCCGAGGTCGGCGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTCCGACTACTGCACGCCCAAGACCACGCTGTCAAGGATCTTGGAGAAGTACCAGACCAACTCCGGGAAGATACTCTGGGATGAGAAGCACAAGAGCCTCAGCGCAGAGATCGATCGTGTCAAGAAGGAGAACGACAACATGCAGATCGAGCTCAGGCATATGAAAGGGGAGGATCTGAACTCCCTGCAGCCCAAGGAGCTGATCGCGATCGAGGAGGCGCTCAACAACGGCCAGGCCAATCTGCGGGACAAGATGATGGACCACTGGAGGATGCATAAAAGGAATGAGAAGATGCTGGAGGACGAGCACAAGATGTTGGCTTTTAGGGTGCACCAGCAGGAGGTCGAGCTGAGCGGCGGCATAAGGGAGCTGGAGCTCGGCTACCACCACGACGACAGGGACTTCGCGGCCTCGATGCCGTTCACCTTCAGGGTGCAGCCCAGCCACCCCAACCTCCAGCAGGAGAAGTAGGCTGCTGAGCACTGCCAATTTGGCTGAACCTCCTGCTTGCTAGCTTTGCATTTCCTCATGCGCTGCTAGATGTATCTGTGGTTTCTCTCATGCCTGTCTGAATGAACTCACACTGATGAGAGGGTGTCAGTTGTTTTGTGCTCCTCCCAGCATTAGCACTCAGAATTCAGAAATGACTCAATGTCAGTTGCTTTTGTGCTTCTCCCAGCATTAGCACTCAGAATTCAGAAATGACTCAATGTCAGTTGCTTTTGTGCTTCTCCCTGCTTGTTTAATTAGCCACTGTTCTTGTTTCCAGATGGTGAACAGTCAGTTTGTATTATCTAGTTATCTTGGCAAGGATCAGTAAAATTCACAAGTAGCAGCCAACTCTGATAATAATTCCATCTGTTTCATCGCTTGGAATGAATTGTATGGGAAAAAAAAATCAATGCAAATCAAGAGATAACGAAACATATGATTCTGGAGTTCAATTGACCAGAATTTGCAAGAGCACTACATCCATATCGGCTATTGTTCTTATCTAGTAGGCTGTATGATTCTTGAATTCGCCAAGAAAAAGATCACCTCCTCCTACATCACCTGAGCATGTCGCCATTGTCAATGAACGGGCCACTGAACGCCGGCGAGGCGCTGAAGTTGCTCCCGGCCTCGCTGAACATGGCGCTGTGCCCGTACGGCAGCGGCCGGTCCGGCAGCTCCGGGATGTCCATGTCCCCCTCCAGCATCTTCACCGCCTCGGTGATGGTCGGCCGGAGCGCCACCATGACGTGCGCGCACAGGATCCCGACGAGCACGAACCTCTCCATGGCGCCGCCCCGGGGGCTGTCCGCAGTCGACAGCGCGCCGTCGAGCACCTCCCTCGCCTGCCCGGCCTTGACGTGCGCCCACGCCCAGTCGGTGATCAGCACGGGGCCCGACGGCGCCGACATGTCCAGGACGCGCCGCGCGCTCAGCACCTCGAGCACCAGCACGCCGAAGCTGTACACGTCGCTCTTCTCCGTCAGCTGCCCGTACAGCGCGTACTCCGGCGCCAGGTAGCCGTGCGTGCCGGCGACGCGCGTCGTGAGGTGGGACTGCCCCTCCCGGCTCCGCCTCGCCAGCCCGAAGTCCGCCACCCGCGCGCGCAT - >LOC_Os05g34940.3
CTCCACTCCAACCATGGCGTCCAGTCGTCCACACCCCCCACCATCCCCACCTTAAAGACCGGAAGAACGGCAACTCCCCAACCCTCTTGTTTCTTCGAGAGCGAGGTGAAGATTTGTTTCTTGGTTTGTGTTCTTGGAGTGGAGGAGGAGGAGGAGTTGGATATGGGGCGCGGCAAGATCGAGATCAAGAGGATCGAGAACTCGACGAACCGGCAGGTGACGTTCTCGAAGCGCCGCGCCGGGATACTCAAGAAGGCCCGCGAGATCGGCGTGCTCTGCGACGCCGAGGTCGGCGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTCCGACTACTGCACGCCCAAGACCACGCTGTCAAGGATCTTGGAGAAGTACCAGACCAACTCCGGGAAGATACTCTGGGATGAGAAGCACAAGAGCCTCAGCGCAGAGATCGATCGTGTCAAGAAGGAGAACGACAACATGCAGATCGAGCTCAGGCATATGAAAGGGGAGGATCTGAACTCCCTGCAGCCCAAGGAGCTGATCGCGATCGAGGAGGCGCTCAACAACGGCCAGGCCAATCTGCGGGACAAGATGATGGACCACTGGAGGATGCATAAAAGGAATGAGAAGATGCTGGAGGACGAGCACAAGATGTTGGCTTTTAGGGTGCACCAGCAGGAGGTCGAGCTGAGCGGCGGCATAAGGGAGCTGGAGCTCGGCTACCACCACGACGACAGGGACTTCGCGGCCTCGATGCCGTTCACCTTCAGGGTGCAGCCCAGCCACCCCAACCTCCAGCAGGAGAAGTAGGCTGCTGAGCACTGCCAATTTGGCTGAACCTCCTGCTTGCTAGCTTTGCATTTCCTCATGCGCTGCTAGATGTATCTGTGGTTTCTCTCATGCCTGTCTGAATGAACTCACACTGATGAGAGGGTGTCAGTTGTTTTGTGCTCCTCCCAGCATTAGCACTCAGAATTCAGAAATGACTCAATGTCAGTTGCTTTTGTGCTTCTCCCAGCATTAGCACTCAGAATTCAGAAATGACTCAATGTCAGTTGCTTTTGTGCTTCTCCCTGCTTGTTTAATTAGCCACTGTTCTTGTTTCCAGATGGTGAACAGTCAGTTTGTATTATCTAGTTATCTTGGCAAGGATCAGTAAAATTCACAAGTAGCAGCCAACTCTGATAATAATTCCATCTGTTTCATCGCTTGGAATGAATTGTATGGGAAAAAAAAATCAATGCAAATCAAGAGATAACGAAACATATGATTCTGGAGTTCAATTGACCAGAATTTGCAAGAGCACTACATCCATATCGGCTATTGTTCTTATCTAGTAGGCTGTATGATTCTTGAATTCGCCAAGAAAAAGATCACCTCCTCCTACATCACCTGAGCATGTCGCCATTGTCAATGAACGGGCCACTGAACGCCGGCGAGGCGCTGAAGTTGCTCCCGGCCTCGCTGAACATGGCGCTGTGCCCGTACGGCAGCGGCCGGTCCGGCAGCTCCGGGATGTCCATGTCCCCCTCCAGCATCTTCACCGCCTCGGTGATGGTCGGCCGGAGCGCCACCATGACGTGCGCGCACAGGATCCCGACGAGCACGAACCTCTCCATGGCGCCGCCCCGGGGGCTGTCCGCAGTCGACAGCGCGCCGTCGAGCACCTCCCTCGCCTGCCCGGCCTTGACGTGCGCCCACGCCCAGTCGGTGATCAGCACGGGGCCCGACGGCGCCGACATGTCCAGGACGCGCCGCGCGCTCAGCACCTCGAGCACCAGCACGCCGAAGCTGTACACGTCGCTCTTCTCCGTCAGCTGCCCGTACAGCGCGTACTCCGGCGCCAGGTAGCCGTGCGTGCCGGCGACGCGCGTCGTGAGGTGGGACTGCCCCTCCCGGCTCCGCCTCGCCAGCCCGAAGTCCGCCACCCGCGCGCGCAT - >LOC_Os05g34940.1
CTCCACTCCAACCATGGCGTCCAGTCGTCCACACCCCCCACCATCCCCACCTTAAAGACCGGAAGAACGGCAACTCCCCAACCCTCTTGTTTCTTCGAGAGCGAGGTGAAGATTTGTTTCTTGGTTTGTGTTCTTGGAGTGGAGGAGGAGGAGGAGTTGGATATGGGGCGCGGCAAGATCGAGATCAAGAGGATCGAGAACTCGACGAACCGGCAGGTGACGTTCTCGAAGCGCCGCGCCGGGATACTCAAGAAGGCCCGCGAGATCGGCGTGCTCTGCGACGCCGAGGTCGGCGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTCCGACTACTGCACGCCCAAGACCACGCTGTCAAGGATCTTGGAGAAGTACCAGACCAACTCCGGGAAGATACTCTGGGATGAGAAGCACAAGAGCCTCAGCGCAGAGATCGATCGTGTCAAGAAGGAGAACGACAACATGCAGATCGAGCTCAGGCATATGAAAGGGGAGGATCTGAACTCCCTGCAGCCCAAGGAGCTGATCGCGATCGAGGAGGCGCTCAACAACGGCCAGGCCAATCTGCGGGACAAGATGATGGACCACTGGAGGATGCATAAAAGGAATGAGAAGATGCTGGAGGACGAGCACAAGATGTTGGCTTTTAGGGTGCACCAGCAGGAGGTCGAGCTGAGCGGCGGCATAAGGGAGCTGGAGCTCGGCTACCACCACGACGACAGGGACTTCGCGGCCTCGATGCCGTTCACCTTCAGGGTGCAGCCCAGCCACCCCAACCTCCAGCAGGAGAAGTAGGCTGCTGAGCACTGCCAATTTGGCTGAACCTCCTGCTTGCTAGCTTTGCATTTCCTCATGCGCTGCTAGATGTATCTGTGGTTTCTCTCATGCCTGTCTGAATGAACTCACACTGATGAGAGGGTGTCAGTTGTTTTGTGCTCCTCCCAGCATTAGCACTCAGAATTCAGAAATGACTCAATGTCAGTTGCTTTTGTGCTTCTCCCAGCATTAGCACTCAGAATTCAGAAATGACTCAATGTCAGTTGCTTTTGTGCTTCTCCCTGCTTGTTTAATTAGCCACTGTTCTTGTTTCCAGATGGTGAACAGTCAGTTTGTATTATCTAGTTATCTTGGCAAGGATCAGTAAAATTCACAAGTAGCAGCCAACTCTGATAATAATTCCATCTGTTTCATCGCTTGGAATGAATTGTATGGGAAAAAAAAATCAATGCAAATCAAGAGATAACGAAACATATGATTCTGGAGTTCAATTGACCAGAATTTGCAAGAGCACTACATCCATATCGGCTATTGTTCTTATCTAGTAGGCTGTATGATTCTTGAATTCGCCAAGAAAAAGATCACCTCCTCCTACATCACCTGAGCATGTCGCCATTGTCAATGAACGGGCCACTGAACGCCGGCGAGGCGCTGAAGTTGCTCCCGGCCTCGCTGAACATGGCGCTGTGCCCGTACGGCAGCGGCCGGTCCGGCAGCTCCGGGATGTCCATGTCCCCCTCCAGCATCTTCACCGCCTCGGTGATGGTCGGCCGGAGCGCCACCATGACGTGCGCGCACAGGATCCCGACGAGCACGAACCTCTCCATGGCGCCGCCCCGGGGGCTGTCCGCAGTCGACAGCGCGCCGTCGAGCACCTCCCTCGCCTGCCCGGCCTTGACGTGCGCCCACGCCCAGTCGGTGATCAGCACGGGGCCCGACGGCGCCGACATGTCCAGGACGCGCCGCGCGCTCAGCACCTCGAGCACCAGCACGCCGAAGCTGTACACGTCGCTCTTCTCCGTCAGCTGCCCGTACAGCGCGTACTCCGGCGCCAGGTAGCCGTGCGTGCCGGCGACGCGCGTCGTGAGGTGGGACTGCCCCTCCCGGCTCCGCCTCGCCAGCCCGAAGTCCGCCACCCGCGCGCGCAT
CDS Sequence
- >LOC_Os05g34940.2
ATGGGGCGCGGCAAGATCGAGATCAAGAGGATCGAGAACTCGACGAACCGGCAGGTGACGTTCTCGAAGCGCCGCGCCGGGATACTCAAGAAGGCCCGCGAGATCGGCGTGCTCTGCGACGCCGAGGTCGGCGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTCCGACTACTGCACGCCCAAGACCACGCTGTCAAGGATCTTGGAGAAGTACCAGACCAACTCCGGGAAGATACTCTGGGATGAGAAGCACAAGAGCCTCAGCGCAGAGATCGATCGTGTCAAGAAGGAGAACGACAACATGCAGATCGAGCTCAGGCATATGAAAGGGGAGGATCTGAACTCCCTGCAGCCCAAGGAGCTGATCGCGATCGAGGAGGCGCTCAACAACGGCCAGGCCAATCTGCGGGACAAGATGATGGACCACTGGAGGATGCATAAAAGGAATGAGAAGATGCTGGAGGACGAGCACAAGATGTTGGCTTTTAGGGTGCACCAGCAGGAGGTCGAGCTGAGCGGCGGCATAAGGGAGCTGGAGCTCGGCTACCACCACGACGACAGGGACTTCGCGGCCTCGATGCCGTTCACCTTCAGGGTGCAGCCCAGCCACCCCAACCTCCAGCAGGAGAAGTAG - >LOC_Os05g34940.3
ATGGGGCGCGGCAAGATCGAGATCAAGAGGATCGAGAACTCGACGAACCGGCAGGTGACGTTCTCGAAGCGCCGCGCCGGGATACTCAAGAAGGCCCGCGAGATCGGCGTGCTCTGCGACGCCGAGGTCGGCGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTCCGACTACTGCACGCCCAAGACCACGCTGTCAAGGATCTTGGAGAAGTACCAGACCAACTCCGGGAAGATACTCTGGGATGAGAAGCACAAGAGCCTCAGCGCAGAGATCGATCGTGTCAAGAAGGAGAACGACAACATGCAGATCGAGCTCAGGCATATGAAAGGGGAGGATCTGAACTCCCTGCAGCCCAAGGAGCTGATCGCGATCGAGGAGGCGCTCAACAACGGCCAGGCCAATCTGCGGGACAAGATGATGGACCACTGGAGGATGCATAAAAGGAATGAGAAGATGCTGGAGGACGAGCACAAGATGTTGGCTTTTAGGGTGCACCAGCAGGAGGTCGAGCTGAGCGGCGGCATAAGGGAGCTGGAGCTCGGCTACCACCACGACGACAGGGACTTCGCGGCCTCGATGCCGTTCACCTTCAGGGTGCAGCCCAGCCACCCCAACCTCCAGCAGGAGAAGTAG - >LOC_Os05g34940.1
ATGGGGCGCGGCAAGATCGAGATCAAGAGGATCGAGAACTCGACGAACCGGCAGGTGACGTTCTCGAAGCGCCGCGCCGGGATACTCAAGAAGGCCCGCGAGATCGGCGTGCTCTGCGACGCCGAGGTCGGCGTCGTCATCTTCTCCAGCGCCGGCAAGCTCTCCGACTACTGCACGCCCAAGACCACGCTGTCAAGGATCTTGGAGAAGTACCAGACCAACTCCGGGAAGATACTCTGGGATGAGAAGCACAAGAGCCTCAGCGCAGAGATCGATCGTGTCAAGAAGGAGAACGACAACATGCAGATCGAGCTCAGGCATATGAAAGGGGAGGATCTGAACTCCCTGCAGCCCAAGGAGCTGATCGCGATCGAGGAGGCGCTCAACAACGGCCAGGCCAATCTGCGGGACAAGATGATGGACCACTGGAGGATGCATAAAAGGAATGAGAAGATGCTGGAGGACGAGCACAAGATGTTGGCTTTTAGGGTGCACCAGCAGGAGGTCGAGCTGAGCGGCGGCATAAGGGAGCTGGAGCTCGGCTACCACCACGACGACAGGGACTTCGCGGCCTCGATGCCGTTCACCTTCAGGGTGCAGCCCAGCCACCCCAACCTCCAGCAGGAGAAGTAG
Protein Sequence
- >LOC_Os05g34940.2
MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELSGGIRELELGYHHDDRDFAASMPFTFRVQPSHPNLQQEK* - >LOC_Os05g34940.3
MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELSGGIRELELGYHHDDRDFAASMPFTFRVQPSHPNLQQEK* - >LOC_Os05g34940.1
MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIEEALNNGQANLRDKMMDHWRMHKRNEKMLEDEHKMLAFRVHQQEVELSGGIRELELGYHHDDRDFAASMPFTFRVQPSHPNLQQEK*