Gene Details:

Functional Descriptions:

  • Here, we characterize the role of the rice transcription factor (TF) SALT-RESPONSIVE ERF1 (SERF1) during grain development.
  • Consistently, during grain filling, starch biosynthesis genes such as GRANULE-BOUND STARCH SYNTHASEI (GBSSI), STARCH SYNTHASEI (SSI), SSIIIa, and ADP-GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT2 (AGPL2) are up-regulated in SERF1 knockout grains.
  • In agreement, plants deficient for SERF1 are more sensitive to salt stress compared with the wild type, while constitutive overexpression of SERF1 improves salinity tolerance.
  • Here, we identified salt-responsive ERF1 (SERF1), a rice (Oryza sativa) transcription factor (TF) gene that shows a root-specific induction upon salt and hydrogen peroxide (H2O2) treatment.
  • Loss of SERF1 impairs the salt-inducible expression of genes encoding members of a mitogen-activated protein kinase (MAPK) cascade and salt tolerance-mediating TFs.
  • We propose that SERF1 amplifies the reactive oxygen species-activated MAPK cascade signal during the initial phase of salt stress and translates the salt-induced signal into an appropriate expressional response resulting in salt tolerance.
  • Through genome-wide expression profiling and chromatin immunoprecipitation, we found that SERF1 directly regulates RICE PROLAMIN-BOX BINDING FACTOR (RPBF), a TF that functions as a positive regulator of grain filling.
  • Our study reveals that SERF1 represents a negative regulator of grain filling and seedling establishment by timing the expression of RPBF.
  • Loss of SERF1 results in more rapid seedling establishment, while SERF1 overexpression has the opposite effect.
  • Loss of SERF1 enhances RPBF expression resulting in larger grains with increased starch content, while SERF1 overexpression represses RPBF resulting in smaller grains.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os05g34730.1
    ATGGGCCGGGTGGCGGCGAGCGGCGGCGGCGGCGGCGGAGGGGAGATGATGAGGTACAGGGGCGTGCGGCGGCGGCGGTGGGGGAAGTGGGTGTCGGAGATCCGGGTGCCCGGGACGCGGGAGCGCCTGTGGCTCGGCTCCTACGCCACCGCCGAGGCCGCCGCCGTCGCGCACGACGCCGCCGTCTGCCTCCTCCGGCTCGGCGGCGGCCGCCGCGCCGCCGCAGGCGGAGGCGGCGGGCTCAACTTCCCCGCCCGCGCGCTCGCCGCGGCGGCGGCCGCCTCCTCCTACGGCGGCGCCGGCGGTCTCCTGTCCCCGCGCTCCGTGCAGCGCGTGGCGTCCGACGCCGGCATGGCCGCCGACGCGCAGCTCGTGGACCTGCGCCGCGACCACCCGCCCGCCGCCGCCGCCGCCTCATCCTCCGGCAGCGGCGTGGCGGGAGACGGTGCAAGAAAGCAAGGGACACGTGGCGAGGTTAGCGACACGTATTGGTGTAGGAATGGAGAGGATGGGAGCAGAAGCCGGAGCTCCGGGAGTGAGGAGCTCATTGTTTACGAGGGCTTAAGTGTAGATGACATGGAAATTTTGATGTAA
CDS Sequence
  • >LOC_Os05g34730.1
    ATGGGCCGGGTGGCGGCGAGCGGCGGCGGCGGCGGCGGAGGGGAGATGATGAGGTACAGGGGCGTGCGGCGGCGGCGGTGGGGGAAGTGGGTGTCGGAGATCCGGGTGCCCGGGACGCGGGAGCGCCTGTGGCTCGGCTCCTACGCCACCGCCGAGGCCGCCGCCGTCGCGCACGACGCCGCCGTCTGCCTCCTCCGGCTCGGCGGCGGCCGCCGCGCCGCCGCAGGCGGAGGCGGCGGGCTCAACTTCCCCGCCCGCGCGCTCGCCGCGGCGGCGGCCGCCTCCTCCTACGGCGGCGCCGGCGGTCTCCTGTCCCCGCGCTCCGTGCAGCGCGTGGCGTCCGACGCCGGCATGGCCGCCGACGCGCAGCTCGTGGACCTGCGCCGCGACCACCCGCCCGCCGCCGCCGCCGCCTCATCCTCCGGCAGCGGCGTGGCGGGAGACGGTGCAAGAAAGCAAGGGACACGTGGCGAGGTTAGCGACACGTATTGGTGTAGGAATGGAGAGGATGGGAGCAGAAGCCGGAGCTCCGGGAGTGAGGAGCTCATTGTTTACGAGGGCTTAAGTGTAGATGACATGGAAATTTTGATGTAA
Protein Sequence
  • >LOC_Os05g34730.1
    MGRVAASGGGGGGGEMMRYRGVRRRRWGKWVSEIRVPGTRERLWLGSYATAEAAAVAHDAAVCLLRLGGGRRAAAGGGGGLNFPARALAAAAAASSYGGAGGLLSPRSVQRVASDAGMAADAQLVDLRRDHPPAAAAASSSGSGVAGDGARKQGTRGEVSDTYWCRNGEDGSRSRSSGSEELIVYEGLSVDDMEILM*