Gene Details:
- MSU gene ID: LOC_Os05g34050
- RAPdb gene ID: Os05g0411300
- Gene Symbol: OsbZIP39
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- In this study, three rice basic leucine zipper (bZIP) transcription factors (OsbZIP39, OsbZIP50 and OsbZIP60) containing putative transmembrane domains (TMDs) in their C-terminal regions were identified as candidates of the ER stress sensor transducer.
- A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response.
Function-related keywords:
Literature:
- Genome-wide analysis of basic leucine zipper transcription factor families in Arabidopsis thaliana, Oryza sativa and Populus trichocarpa . DOI: 10.1007/s11741-009-0216-3
- Signal transduction by IRE1-mediated splicing of bZIP50 and other stress sensors in the endoplasmic reticulum stress response of rice . DOI: 10.1111/j.1365-313X.2011.04844.x ; PMID: 22050533
- Genomic survey and gene expression analysis of the basic leucine zipper transcription factor family in rice . DOI: 10.1104/pp.107.112821 ; PMID: 18065552
- A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response . DOI: 10.1093/pcp/pcr157 ; PMID: 22084314
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g34050.1
GGTAGGGGGGAAAGAGCCGGATCACCACGCCTCGAGCACGAGCTCGTCAACGACTCCGTCGTCTCGTCCACCTCCGAATTCCAAATTTTCCATACCCTTCCTCCCAGTCCTTACACCTCTCGATGCAAAAACCCTAGCGGGGGAAGCACCACCTGCGCAGCCGCAGCGGCCATGGCGGAGCCGGCCCTGCTGGACCCCACCGCCGCCTTCGACCTCCGCCTCTACCCGGCCCACCTCTTCGACCACGAACTCCCTCTCGCCGGCGGCGGCGGCGGCGACGACGACGACGACCTCCCGCTCGACGGGCTCGAGTTCGACCTGCCCGGCGATTTCTCCGTGGAGGACTTCCTCCTCCGGTCTCCGGAGCGGGACGACTCCGGCGAGGGCTCTGCTGCCGGATCCGGGCCCACCGCCTCCCCGTCGTCGTCCCCGACCACCTCGGCGTCCAACTCCGCCGTCGCCAACGGCAGCGGCGGCGAGGTCAAGCACGAGGAGTCGGATGAGGGGAGGAGCGGTGGGGGTGACCCCAAGTGGAGCCTGAAGCGGAAGCAGGCGAGCCCCGGCCCGAGCTCGGACGCGGCCAAGTGCCGCCGATCCGGGGACGGCGACGTTTCTCCGTCGGCGTCGGCGTCGCGGACCGCTGTGGATTCCGACGAGGGGGGGACGGTGTGCGAGGAGGAGGAGGACGAGCGGCGGGCGGCGCGGCTGATGCGGAACCGCGAGAGCGCGCAGCTGTCTCGGCAGAGGAAGAAGCGGTACGTGGAGGAGCTGGAGGAGAAGGTGAAATCGATGCACTCGGTGATTAATGACCTCAATTCTAGGATCTCCTTTGTCGTGGCCGAGAACGCAACACTGCGGCAGCAGCTTAGTGGCGGCAGTGTGAATTGCCCACCACCTGGGGTGTATCCGCCGGCGCCAATTCCCGGCATGCATTTCCCATGGATGCCTGGGTATGCAATGAGACCCCCTGGTTCCCATGTACCTCTTGTGCCAATCCCCCGGTTGAAGCCGCAACAGCCAGTGCCTTCATCCAAAGTAGTGAAGAAACCAGAGAGCAAGAAGACTGTGGAGAACAAGAGTAAGAGCAAGACCAAGACCAAGAAGGTGGCTAGTGTTAGCCTTCTTGGTTTGCTGCTTATTATGCTTGTCTTTGGTGCTTTCATTCCAGGGTTTAATCATAACTTTGGAATGTGTGGGCAGAGTGATAATGCTATGTTTAGGAATTTTGGTCAGTCTCATGCTAGGGTGTTGAGTGTCAGTAGCCAGGATAAAAGTAGTTTGAACAATAGCGACATGATTGGTGTTGATGTTGGAAAGATGACGGGGAATACTGATGGGCCAGGGAAGAAACATCAGCCTGCACACAACTCAAGTGAGATCCTCCCTGCTTTGTTGTATGTGCCGAGGAATGGAAAGCATGTTAAGATCAACGGCAACCTGATTATTCATTCTGTGCTTGCAAGCGAGAAAGCAGTGGCACATAAGGCCTCAAAAGATGATAGTGATCAGTCAGCTAGAGATCACAAAGAGACTAGTGTTGCCATAGCTCGTTATCTTTCGCTGCCTGGAAAGGATGTGAATCGACAGGAGACATCCTCGGCAGATGGACCATTGCCACAATGGTTTCGTGAAGGAATGGAAGGACCTATATTAAATTCTGGAATGTGCAGTGAGGTATTTCAGTTTGACATTTCGACGGCTTCTAGCAATCCTGGTGGCATTATACCTGCATCTCCTGTTGTGAACTCGTCAAGTGTCAATGCTACCGAGAAAATCCCAGCACATTCTGCTGCTTATCATGGCAAGCTGAAAAACAGAAGAGTCATGTACAATGAAGCGATTCCACTCACCGGGAAGACGGCGAACAACACAGAGCCTTTTAACAGAACCTCTGAAAGCAGCAGCAAGTTACCTGATAGCAAGCCAGCATCATCAGTTGTTGTCTCGGTGCTAGCCGATCCAAGGGAGGCTGGTAATGGGGATGGCGATCCGAGAGTATCTCCGAAACCCCTGTCCAAGATATTTGTTGTTGTTCTTGTTGACGGTGTGAGATATGTCACTTACTCCTGCACGCTTCCTTTCAAGAGCTCCAGCCCACATCTTGTGAACTAAGCGGCTGGGTTGTTCGCCAAAAACTGACAGATGAATAGATTTATACAATGATCTGATGCTGTTTCCTAACCAAGGACTAAACTTCCTATGCACTCAGGCTGAGGTAATTCAAGTTTGTCGAAGGTTCGGAGTGATGAGTGCGAGTTTAGTTAATGTATGCAGTTTTTGCAGTGCTGTGATAATCGGGTTCGTTTGCTGTACCTCTAGCTGTAACGGTGATGTAATCATGTAATACTGTTTGATCGTTGAGATATAAGTGCAACTAGTAATATGGGTAGTCGAGAACACGTGCAGAATATACATGCCTTTTTTTACCTTAGTTTCAATGAATATCATAAACAAAGCTACAGTACATCAGGTTGCTGAAAGGTATTTTTTATGCTTTGATCTGGATACTATTTAGATTATGTTTAGGCTGAATTTGTTAGGAATTTTGTTTGTAATGAATTCAGGAACTAGCTAGAAAGAATTGAGTCTGGTCAACATATCTATGAGAATATCTGTTGTTAACA
CDS Sequence
- >LOC_Os05g34050.1
ATGGCGGAGCCGGCCCTGCTGGACCCCACCGCCGCCTTCGACCTCCGCCTCTACCCGGCCCACCTCTTCGACCACGAACTCCCTCTCGCCGGCGGCGGCGGCGGCGACGACGACGACGACCTCCCGCTCGACGGGCTCGAGTTCGACCTGCCCGGCGATTTCTCCGTGGAGGACTTCCTCCTCCGGTCTCCGGAGCGGGACGACTCCGGCGAGGGCTCTGCTGCCGGATCCGGGCCCACCGCCTCCCCGTCGTCGTCCCCGACCACCTCGGCGTCCAACTCCGCCGTCGCCAACGGCAGCGGCGGCGAGGTCAAGCACGAGGAGTCGGATGAGGGGAGGAGCGGTGGGGGTGACCCCAAGTGGAGCCTGAAGCGGAAGCAGGCGAGCCCCGGCCCGAGCTCGGACGCGGCCAAGTGCCGCCGATCCGGGGACGGCGACGTTTCTCCGTCGGCGTCGGCGTCGCGGACCGCTGTGGATTCCGACGAGGGGGGGACGGTGTGCGAGGAGGAGGAGGACGAGCGGCGGGCGGCGCGGCTGATGCGGAACCGCGAGAGCGCGCAGCTGTCTCGGCAGAGGAAGAAGCGGTACGTGGAGGAGCTGGAGGAGAAGGTGAAATCGATGCACTCGGTGATTAATGACCTCAATTCTAGGATCTCCTTTGTCGTGGCCGAGAACGCAACACTGCGGCAGCAGCTTAGTGGCGGCAGTGTGAATTGCCCACCACCTGGGGTGTATCCGCCGGCGCCAATTCCCGGCATGCATTTCCCATGGATGCCTGGGTATGCAATGAGACCCCCTGGTTCCCATGTACCTCTTGTGCCAATCCCCCGGTTGAAGCCGCAACAGCCAGTGCCTTCATCCAAAGTAGTGAAGAAACCAGAGAGCAAGAAGACTGTGGAGAACAAGAGTAAGAGCAAGACCAAGACCAAGAAGGTGGCTAGTGTTAGCCTTCTTGGTTTGCTGCTTATTATGCTTGTCTTTGGTGCTTTCATTCCAGGGTTTAATCATAACTTTGGAATGTGTGGGCAGAGTGATAATGCTATGTTTAGGAATTTTGGTCAGTCTCATGCTAGGGTGTTGAGTGTCAGTAGCCAGGATAAAAGTAGTTTGAACAATAGCGACATGATTGGTGTTGATGTTGGAAAGATGACGGGGAATACTGATGGGCCAGGGAAGAAACATCAGCCTGCACACAACTCAAGTGAGATCCTCCCTGCTTTGTTGTATGTGCCGAGGAATGGAAAGCATGTTAAGATCAACGGCAACCTGATTATTCATTCTGTGCTTGCAAGCGAGAAAGCAGTGGCACATAAGGCCTCAAAAGATGATAGTGATCAGTCAGCTAGAGATCACAAAGAGACTAGTGTTGCCATAGCTCGTTATCTTTCGCTGCCTGGAAAGGATGTGAATCGACAGGAGACATCCTCGGCAGATGGACCATTGCCACAATGGTTTCGTGAAGGAATGGAAGGACCTATATTAAATTCTGGAATGTGCAGTGAGGTATTTCAGTTTGACATTTCGACGGCTTCTAGCAATCCTGGTGGCATTATACCTGCATCTCCTGTTGTGAACTCGTCAAGTGTCAATGCTACCGAGAAAATCCCAGCACATTCTGCTGCTTATCATGGCAAGCTGAAAAACAGAAGAGTCATGTACAATGAAGCGATTCCACTCACCGGGAAGACGGCGAACAACACAGAGCCTTTTAACAGAACCTCTGAAAGCAGCAGCAAGTTACCTGATAGCAAGCCAGCATCATCAGTTGTTGTCTCGGTGCTAGCCGATCCAAGGGAGGCTGGTAATGGGGATGGCGATCCGAGAGTATCTCCGAAACCCCTGTCCAAGATATTTGTTGTTGTTCTTGTTGACGGTGTGAGATATGTCACTTACTCCTGCACGCTTCCTTTCAAGAGCTCCAGCCCACATCTTGTGAACTAA
Protein Sequence
- >LOC_Os05g34050.1
MAEPALLDPTAAFDLRLYPAHLFDHELPLAGGGGGDDDDDLPLDGLEFDLPGDFSVEDFLLRSPERDDSGEGSAAGSGPTASPSSSPTTSASNSAVANGSGGEVKHEESDEGRSGGGDPKWSLKRKQASPGPSSDAAKCRRSGDGDVSPSASASRTAVDSDEGGTVCEEEEDERRAARLMRNRESAQLSRQRKKRYVEELEEKVKSMHSVINDLNSRISFVVAENATLRQQLSGGSVNCPPPGVYPPAPIPGMHFPWMPGYAMRPPGSHVPLVPIPRLKPQQPVPSSKVVKKPESKKTVENKSKSKTKTKKVASVSLLGLLLIMLVFGAFIPGFNHNFGMCGQSDNAMFRNFGQSHARVLSVSSQDKSSLNNSDMIGVDVGKMTGNTDGPGKKHQPAHNSSEILPALLYVPRNGKHVKINGNLIIHSVLASEKAVAHKASKDDSDQSARDHKETSVAIARYLSLPGKDVNRQETSSADGPLPQWFREGMEGPILNSGMCSEVFQFDISTASSNPGGIIPASPVVNSSSVNATEKIPAHSAAYHGKLKNRRVMYNEAIPLTGKTANNTEPFNRTSESSSKLPDSKPASSVVVSVLADPREAGNGDGDPRVSPKPLSKIFVVVLVDGVRYVTYSCTLPFKSSSPHLVN*