Information report for OsSPL9
Gene Details
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Functional Descriptions
- Overexpression of OsSPL9 enhances accumulation of Cu in rice grain and improves its digestibility and metabolism.
- Moreover, natural variation in the MIR528 promoter region caused differences in miR528 expression among rice varieties, potentially due to differences in the binding strength of the transcription factor OsSPL9.
- OsSPL9 was highly expressed in the early developing young panicles, consistent with its function of regulating panicle development.
- By combining expression analysis and dual-luciferase assays, we further confirmed that OsSPL9 directly activates the expression of RCN1 (rice TERMINAL FLOWER 1/CENTRORADIALIS homolog) in the early developing young panicle to regulate the panicle branches and GNP.
- OsSPL9 Regulates Grain Number and Grain Yield in Rice.
Functional Keywords
- grain , transcription-factor , development , flower , panicle , grain-number , grain-yield , yield
Literature and News
- Overexpression of OsSPL9 enhances accumulation of Cu in rice grain and improves its digestibility and metabolism . DOI: 10.1016/j.jgg.2016.09.004 ; PMID: 27876244
- Transcriptional Regulation of miR528 by OsSPL9 Orchestrates Antiviral Response in Rice . DOI: 10.1016/j.molp.2019.04.010 ; PMID: 31059826
- Fine-Tuning of MiR528 Accumulation Modulates Flowering Time in Rice . DOI: 10.1016/j.molp.2019.04.009 ; PMID: 31059825
- OsSPL9 Regulates Grain Number and Grain Yield in Rice . DOI: 10.3389/fpls.2021.682018 ; PMID: 34149783
Gene Resources
- UniProt: Q6I576
- EMBL: AC137620, AC137928, AK100057
- AlphaFoldDB: Q6I576
- EnsemblPlants: Os05t0408200-01
- Gramene: Os05t0408200-01
- KEGG: dosa:Os05g0408200
- Orthologous matrix: WQSEELS
- InterPro: IPR004333, IPR036893, IPR044817
- PANTHER: PTHR31251, PTHR31251:SF108
- SUPFAM: SSF103612
- PROSITE: PS51141
- Gene3D: 4.10.1100.10
- OrthoDB: Q6I576
- SWISS-MODEL: Q6I576
- eggNOG: ENOG502QUTN
Homologs
- Brassica napus: BnaA06G0013800ZS, BnaC06G0075400ZS
- Brassica oleracea: Bo6g031220
- Brassica rapa: Bra039656
- Cucumis melo: MELO3C025597
- Cucumis sativus: CsGy4G021720
- Glycine max: Glyma.13G177400
- Gossypium hirsutum: Gohir.A10G027200
- Juglans regia: Jr03_07500, Jr04_16830
- Lactuca sativa: gene-LSAT_3X37960, gene-LSAT_1X128440
- Setaria italica: SETIT_013870mg
- Triticum aestivum: TaSPL6-D
- Vitis vinifera: VIT_12s0028g03350, VIT_10s0003g00050
Sequences
cDNA Sequence
- >LOC_Os05g33810.1
GTCCTAGTCATCGGACGCCGCCCACCTACCCGACTACCCGAGGCAGCCTCTCTCTCCTCCCTCGCCCACCACCACACGACACGAGACGAGAAGACTGATTCATTCGCTCGCGTACACGCCTAGGCGCTCCGAGAATTCGTGAGGGAATCCCGCATCGCCGGAGCCGATCGGCGGCGCCGCGGGCGGGTGGGGGGGGGGGGTTAGGGTTAGGGTTTTGGGGGTGGCCCACCGGGGATGGACGCCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGTGGGGTGGATGCCGGCGAGCCCGTCTGGGACTGGGGGAACCTCCTCGACTTCGCCGTCCATGACGACGACTCGCTGGTCCTCCCGTGGGGGGACGATTCGATTGGGATCGAGGCCGATCCCGCCGAGGCGGCGCTGCTCCCCCCTGCCCCGTCGCCGCAGCCGGCGGAGGCGGAGGCGGAGGCCGCGGGGCCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGACTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCACACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAGTTGAAGCTAGATTAGATTAACCTTCCTGTTGCTTTTCCCCTGTATCATATGCATGTACCTTTCTAATTTGAGGCTTAGCTTGTGCATCCGATGTTCAAATATTTGTAAGAGGACCCACAGGCATAAATGCAAATTTTTGCAGCTTTTTTTGGCAAAAAGTATGAGCATATAGTTGCCTGAAGACCTGAACTTCCAGGTACACACCAAATGTAATAGATGTAATGGTTCAAAGACAGTGATTGGAATTTTTCATGATCTACATACAACTATCCATTGTCTCTT
CDS Sequence
- >LOC_Os05g33810.1
ATGGACGCCCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGAGGTGGGGTGGATGCCGGCGAGCCCGTCTGGGACTGGGGGAACCTCCTCGACTTCGCCGTCCATGACGACGACTCGCTGGTCCTCCCGTGGGGGGACGATTCGATTGGGATCGAGGCCGATCCCGCCGAGGCGGCGCTGCTCCCCCCTGCCCCGTCGCCGCAGCCGGCGGAGGCGGAGGCGGAGGCCGCGGGGCCGGCGTCGCTGCCGTCGTCTATGCAGGCGGAGGGAAGCAAGCGGCGCGTGAGGAAGCGCGACCCGCGGCTGGTTTGCCCGAACTACCTCGCCGGGAGGGTGCCGTGCGCGTGCCCCGAGATTGACGAGATGGCGGCCGCCTTGGAGGTCGAGGACGTGGCCACAGAGTTGCTGGCAGGGGCGCGGAAGAAGCCGAAGGGTGCCGGCCGTGGTAGTGGTGCGGCAGTCGGCGGAAGTGGTGGAGGGGCTAGCCGTGGGACACCGGCCGAGATGAAGTGCCAGGTGCCTGGTTGTGAGGCGGACATACGTGAGCTGAAGGGATACCACCGCCGGCACAGGGTGTGTTTGCGCTGCGCGCACGCCGCCGCTGTCATGCTTGATGGTGTCCAGAAGCGCTATTGCCAGCAGTGTGGCAAGTTTCATATATTACTAGATTTCGATGAAGATAAAAGGAGTTGTAGAAGGAAATTGGAGCGGCACAACAAAAGAAGACGAAGAAAACCTGATTCCAAAGGCATATTGGAGAAAGATATAGATGACCAGTTGGATTTTTCAGCAGATGGTAGTGGTGATGGTGAACTAAGAGAAGAGAACATAGATGTCACTACCAGTGAGACGCTTGAGACTGTTCTGAGCAATAAGGTTTTGGACAGGGAAACACCTGTGGGTTCCGATGATGTGCTTAGTTCTCCAACATGTGCACAACCCAGTTTGCAAATCGACCAAAGTAAAAGCTTAGTGACTTTCGCTGCTTCTGTTGAAGCCTGCCTTGGCACTAAACAGGAAAACACCAAACTTACCAATTCTCCTGTGCATGACACAAAGAGTACTTACTCATCCTCGTGTCCCACAGGACGTGTATCATTCAAGTTGTACGATTGGAATCCTGCTGAATTTCCTCGACGCTTACGCCACCAAATATTTGAGTGGCTTTCTAGCATGCCTGTTGAACTGGAGGGCTATATTCGTCCTGGTTGTACAATTTTAACTGTATTTGTTGCAATGCCACAACATATGTGGGACAAGTTATCCGAAGACACAGGAAATCTTGTCAAAAGCTTGGTAAATGCTCCAAATAGTCTCCTGTTGGGTAAAGGGGCCTTCTTTATCCATGTCAATAATATGATATTTCAAGTATTGAAAGATGGTGCAACATTGACCAGTACCAGATTAGAGGTACAGTCCCCGAGGATTCACTATGTTCATCCATCATGGTTTGAAGCAGGAAAGCCCATCGATCTTATTCTTTGTGGAAGTTCTCTTGATCAGCCTAAATTCAGGTCACTTGTGTCATTTGATGGACTGTACTTGAAGCATGATTGTCGCCGTATACTGTCACATGAGACCTTTGATTGTATTGGAAGTGGGGAACATATACTTGATTCTCAACATGAAATATTCCGGATAAATATTACCACATCAAAGCTGGATACTCATGGACCCGCATTTGTGGAAGTGGAAAACATGTTTGGGCTATCAAATTTTGTTCCTATCCTTGTTGGTAGCAAGCATTTATGTTCTGAACTAGAGCAGATACATGATGCTCTGTGTGGTTCTTCGGACATAAGTTCTGATCCTTGTGAGCTTCGAGGACTTCGACAGACTGCAATGTTGGGATTCCTCATCGACATTGGATGGCTAATAAGGAAGCCATCCATAGATGAATTTCAAAACCTACTGAGTTTAGCAAATATCCAGAGATGGATATGCATGATGAAATTCCTGATACAGAACGATTTTATCAATGTTCTGGAAATAATAGTGAACTCGTTGGACAACATCATAGGGTCAGAGCTTCTTTCTAACTTGGAAAAGGGTAGACTGGAAAATCATGTAACAGAATTTCTTGGGTATGTAAGCGAAGCTCGAAACATTGTTGATAATAGACCTAAATATGACAAGCAGAGACAGGTTGATACAAGATGGGCAGGTGATTATGCTCCAAACCAGCCAAAGTTGGGCATTTCTGTGCCACTTGCTGAAAGTACTGGAACCAGTGGAGAACATGATTTGCACTCAACCAATGCAGCTTCTGGAGAGGAGGAAAATATGCCTCTAGTGACTAAAGCTCTCCCACACAGGCAATGCTGTCACCCTGAGACTAGTGCTAGATGGCTTAACGCTGCCTCCATTGGTGCTTTTCCAGGTGGTGCCATGAGAATGCGTCTTGCCACCACTGTGGTAATTGGTGCTGTGGTATGTTTTGCAGCTTGTGTTGTCCTTTTCCACCCACACAGAGTAGGGGTGCTTGCCGCGCCAGTAAAGAGGTACTTGTCTAGGAACTACTCATCATAG
Protein Sequence
- >LOC_Os05g33810.1
MDAPGGGGGGGGGGGGVDAGEPVWDWGNLLDFAVHDDDSLVLPWGDDSIGIEADPAEAALLPPAPSPQPAEAEAEAAGPASLPSSMQAEGSKRRVRKRDPRLVCPNYLAGRVPCACPEIDEMAAALEVEDVATELLAGARKKPKGAGRGSGAAVGGSGGGASRGTPAEMKCQVPGCEADIRELKGYHRRHRVCLRCAHAAAVMLDGVQKRYCQQCGKFHILLDFDEDKRSCRRKLERHNKRRRRKPDSKGILEKDIDDQLDFSADGSGDGELREENIDVTTSETLETVLSNKVLDRETPVGSDDVLSSPTCAQPSLQIDQSKSLVTFAASVEACLGTKQENTKLTNSPVHDTKSTYSSSCPTGRVSFKLYDWNPAEFPRRLRHQIFEWLSSMPVELEGYIRPGCTILTVFVAMPQHMWDKLSEDTGNLVKSLVNAPNSLLLGKGAFFIHVNNMIFQVLKDGATLTSTRLEVQSPRIHYVHPSWFEAGKPIDLILCGSSLDQPKFRSLVSFDGLYLKHDCRRILSHETFDCIGSGEHILDSQHEIFRINITTSKLDTHGPAFVEVENMFGLSNFVPILVGSKHLCSELEQIHDALCGSSDISSDPCELRGLRQTAMLGFLIDIGWLIRKPSIDEFQNLLSLANIQRWICMMKFLIQNDFINVLEIIVNSLDNIIGSELLSNLEKGRLENHVTEFLGYVSEARNIVDNRPKYDKQRQVDTRWAGDYAPNQPKLGISVPLAESTGTSGEHDLHSTNAASGEEENMPLVTKALPHRQCCHPETSARWLNAASIGAFPGGAMRMRLATTVVIGAVVCFAACVVLFHPHRVGVLAAPVKRYLSRNYSS*