Gene Details:

Functional Descriptions:

  • Here we show that the cytokinin (CK) content is dramatically increased in shoot bases of the rice SL signaling mutant d53 By examining transcript levels of all the CK metabolism-related genes after treatment with SL analog GR24, we identified CYTOKININ OXIDASE/DEHYDROGENASE 9 (OsCKX9) as a primary response gene significantly up-regulated within 1 h of treatment in the wild type but not in d53 We also found that OsCKX9 functions as a cytosolic and nuclear dual-localized CK catabolic enzyme, and that the overexpression of OsCKX9 suppresses the browning of d53 calli.
  • Both the CRISPR/Cas9-generated OsCKX9 mutants and OsCKX9-overexpressing transgenic plants showed significant increases in tiller number and decreases in plant height and panicle size, suggesting that the homeostasis of OsCKX9 plays a critical role in regulating rice shoot architecture.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os05g31040.1
    ATGAGGCCATCACTCTTGCAGTATCTGAAGCTGCTCCTGTTACTTGCCCTTGGTGGTGTCACCACCATGCATGTGCCTAAACAAGATGTGCCATCATCCCTGGAGGAACTCACCCTTGATGGCCATTTCAGCTTCCACGATGTGTCTGCTGCTGCACAGGACTTTGGCAACCTGTCCAGCTTCCCGCCGGTTGCGGTGCTTCATCCTGGCTCAGTGGCTGACATTGCCACAACCATCAGGCATGTGTTCTTGATGGGTGAGCACTCCACGCTCACAGTGGCAGCCCGTGGACATGGGCACTCGCTGTATGGGCAGTCCCAGGCTGCTGAGGGAATCATCATCAGTATGGAATCCCTCCAGAGTAACACAATGAGGGTGAACCCTGGCGTATCACCCTATGTCGATGCTTCAGGAGGAGAACTCTGGATAAATGTTTTGCATGAGACTCTGAAGTATGGTTTAGCACCAAAGTCGTGGACGGACTATCTCCATCTCACGGTTGGAGGCACACTGTCGAATGCAGGAGTCAGTGGGCAGACCTTCCGGCATGGCCCACAGATCAGCAATGTCAACGAGCTGGAAATTGTGACTGGAAGAGGTGATGTTATCACATGCTCACCTGAACAAAACTCTGATCTCTTCCATGCTGCCCTTGGTGGCCTAGGTCAGTTTGGCGTCATCACAAGAGCCAGGATTCCTCTTGAACCTGCTCCAAAAATGGTAAGGTGGCTACGAGTTCTCTACTTGGATTTCACAAGCTTCACCGAAGACCAGGAAATGCTCATTTCAGCAGAGAAGACATTTGACTACATCGAGGGCTTTGTCATCATAAATAGGACAGGCATCCTGAACAACTGGAGGTCGTCCTTCAATCCGCAGGACCCAGTGCGTTCTAGCCAGTTTGAATCAGATGGAAAAGTGCTCTTCTGCCTTGAGATGACAAAGAACTTCAACCCTGACGAGGCTGATGTCATGGAACAGGAGGTCAACACACTGCTGTCTCAACTTAGATATATGCCTTCCTCCTTATTCCACACGGATGTAACATACATAGAGTTCTTGGATAGGGTACACTCTTCTGAGATGAAGTTGAGAGCTAAGGGCATGTGGGAAGTCCCACACCCATGGCTTAATATCATCATTCCAAGAAGCATGATCCATAAATTTGCGAAGGAGGTCTTTGGGAAAATCCTGAAAGACAGTAACAATGGTCCCATATTACTCTATCCAGTGAACAAATCCAGATGGGACAACAGAACATCAGTAGTCATACCAGATGAGGAAGTTTTCTACCTGGTGGCATTCCTATCCTCAGCACTTGGCCCCCATAACATCAAACATACATTGGACCTGAACTACAGGATAATAGAGTTCTCTGACAAGGCAGGTATTGGAGTGAAGCAGTATCTCCCAAACTATACCACAGAACAGGAGTGGCAGTCCCATTTTGGTGCAAGGTGGGACACATTTCAACAGAGGAAAAAAGCCTATGACCCCTTGGCCATCTTAGCTCCAGGACAAAGAATATTTCAAAAGGCATCAGCGTCACTACCCTTGCCCTCATGACAGTATCTAATGTAAATATTTATTTCCTGGGAGCAAACGTTTGTAGTTTGTACAGAACTGTAGGTAAAATTTCTTTTACAAAAGGCAATTAACTGTAGCATGGGCAACACAGTTTACTAACTACTGAATATCAGCAGTGAACTAGTGGTGCACTCATGAACATTCTCATCAAGAAGATTAAAGGAGAGCAGCATTGCCTTACTTCCAATTTTCTATGAAGCTCTTTGGAAGCAATAA
CDS Sequence
  • >LOC_Os05g31040.1
    ATGAGGCCATCACTCTTGCAGTATCTGAAGCTGCTCCTGTTACTTGCCCTTGGTGGTGTCACCACCATGCATGTGCCTAAACAAGATGTGCCATCATCCCTGGAGGAACTCACCCTTGATGGCCATTTCAGCTTCCACGATGTGTCTGCTGCTGCACAGGACTTTGGCAACCTGTCCAGCTTCCCGCCGGTTGCGGTGCTTCATCCTGGCTCAGTGGCTGACATTGCCACAACCATCAGGCATGTGTTCTTGATGGGTGAGCACTCCACGCTCACAGTGGCAGCCCGTGGACATGGGCACTCGCTGTATGGGCAGTCCCAGGCTGCTGAGGGAATCATCATCAGTATGGAATCCCTCCAGAGTAACACAATGAGGGTGAACCCTGGCGTATCACCCTATGTCGATGCTTCAGGAGGAGAACTCTGGATAAATGTTTTGCATGAGACTCTGAAGTATGGTTTAGCACCAAAGTCGTGGACGGACTATCTCCATCTCACGGTTGGAGGCACACTGTCGAATGCAGGAGTCAGTGGGCAGACCTTCCGGCATGGCCCACAGATCAGCAATGTCAACGAGCTGGAAATTGTGACTGGAAGAGGTGATGTTATCACATGCTCACCTGAACAAAACTCTGATCTCTTCCATGCTGCCCTTGGTGGCCTAGGTCAGTTTGGCGTCATCACAAGAGCCAGGATTCCTCTTGAACCTGCTCCAAAAATGGTAAGGTGGCTACGAGTTCTCTACTTGGATTTCACAAGCTTCACCGAAGACCAGGAAATGCTCATTTCAGCAGAGAAGACATTTGACTACATCGAGGGCTTTGTCATCATAAATAGGACAGGCATCCTGAACAACTGGAGGTCGTCCTTCAATCCGCAGGACCCAGTGCGTTCTAGCCAGTTTGAATCAGATGGAAAAGTGCTCTTCTGCCTTGAGATGACAAAGAACTTCAACCCTGACGAGGCTGATGTCATGGAACAGGAGGTCAACACACTGCTGTCTCAACTTAGATATATGCCTTCCTCCTTATTCCACACGGATGTAACATACATAGAGTTCTTGGATAGGGTACACTCTTCTGAGATGAAGTTGAGAGCTAAGGGCATGTGGGAAGTCCCACACCCATGGCTTAATATCATCATTCCAAGAAGCATGATCCATAAATTTGCGAAGGAGGTCTTTGGGAAAATCCTGAAAGACAGTAACAATGGTCCCATATTACTCTATCCAGTGAACAAATCCAGATGGGACAACAGAACATCAGTAGTCATACCAGATGAGGAAGTTTTCTACCTGGTGGCATTCCTATCCTCAGCACTTGGCCCCCATAACATCAAACATACATTGGACCTGAACTACAGGATAATAGAGTTCTCTGACAAGGCAGGTATTGGAGTGAAGCAGTATCTCCCAAACTATACCACAGAACAGGAGTGGCAGTCCCATTTTGGTGCAAGGTGGGACACATTTCAACAGAGGAAAAAAGCCTATGACCCCTTGGCCATCTTAGCTCCAGGACAAAGAATATTTCAAAAGGCATCAGCGTCACTACCCTTGCCCTCATGA
Protein Sequence
  • >LOC_Os05g31040.1
    MRPSLLQYLKLLLLLALGGVTTMHVPKQDVPSSLEELTLDGHFSFHDVSAAAQDFGNLSSFPPVAVLHPGSVADIATTIRHVFLMGEHSTLTVAARGHGHSLYGQSQAAEGIIISMESLQSNTMRVNPGVSPYVDASGGELWINVLHETLKYGLAPKSWTDYLHLTVGGTLSNAGVSGQTFRHGPQISNVNELEIVTGRGDVITCSPEQNSDLFHAALGGLGQFGVITRARIPLEPAPKMVRWLRVLYLDFTSFTEDQEMLISAEKTFDYIEGFVIINRTGILNNWRSSFNPQDPVRSSQFESDGKVLFCLEMTKNFNPDEADVMEQEVNTLLSQLRYMPSSLFHTDVTYIEFLDRVHSSEMKLRAKGMWEVPHPWLNIIIPRSMIHKFAKEVFGKILKDSNNGPILLYPVNKSRWDNRTSVVIPDEEVFYLVAFLSSALGPHNIKHTLDLNYRIIEFSDKAGIGVKQYLPNYTTEQEWQSHFGARWDTFQQRKKAYDPLAILAPGQRIFQKASASLPLPS*