Information report for DEPG1;OsRP1L1
Gene Details
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Functional Descriptions
- Semi-quantitative PCR assays showed that DEPG1 is widely expressed in rice, and is preferentially expressed in internodes, leaf blades, leaf sheaths and flag leaves.
- Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants.
- DEPG1 is a nucleotide-binding site (NBS)-leucine rich repeat (LRR) gene, and the deduced protein sequence of DEPG1 has approximately 64% identity with that of the disease resistance gene Pi37.
- Additionally, Xoc negatively regulates expression of DEPG1 at the early stage of the pathogen infection, and so do the three defense-signal compounds including salicylic acid (SA), methyl jasmonate (MeJA) and 1-aminocyclopropane-1-carboxylic-acid (ACC).
Functional Keywords
- leaf , disease-resistance , disease , defense , jasmonate , salicylic-acid , sheath
Literature and News
- Over-expression in the nucleotide-binding site-leucine rich repeat gene DEPG1 increases susceptibility to bacterial leaf streak disease in transgenic rice plants . DOI: 10.1007/s11033-011-1122-6 ; PMID: 21717056
- OsNBL1, a Multi-Organelle Localized Protein, Plays Essential Roles in Rice Senescence, Disease Resistance, and Salt Tolerance . DOI: 10.1186/s12284-020-00450-z ; PMID: 33423130
Gene Resources
- UniProt: Q5WMM8
- EMBL: AK120289, AP014961, JQ845900
- AlphaFoldDB: Q5WMM8
- EnsemblPlants: Os05t0365300-01
- Gramene: Os05t0365300-01
- Orthologous matrix: YLCPNSR
- InterPro: IPR002182, IPR027417, IPR032675
- PANTHER: PTHR36766, PTHR36766:SF60
- SUPFAM: SSF52058, SSF52540
- Gene3D: 1.10.10.10, 3.40.50.300, 3.80.10.10
- SWISS-MODEL: Q5WMM8
- eggNOG: KOG4658
Sequences
cDNA Sequence
- >LOC_Os05g30220.1
AGTGACTCCTATCCCAATTCCTCTTGCCACACACCACTTATCCGCTGCAGCAACCTCGCAATCCCCTCGGCGCTCGCTGGTTCCAGCCAAGCTGCTTCCGTCCTCCTTCACTTCATCTGTGCAACAGGGTTATTCATCCGGCCCTGGTGGTTTTGCCGTCTGCAAACACCTGTCTTCCATTCGCATTTCAGAAGAAAAAGAAACACACACACAAAAAAACTACTCGTCAGAGTTTTCTTCCTAATTTCCCATCCAAAACCAGTAGTTTTCATTGAAAACAAAATCATTTGTTGTTGTACTGTCCCCGTATTTTGTTCGTAGCAATTCCCATCCAAAAAACAAAATCATCCTAGCTTTTTACTTTCACCTTGTTCCCATCGGTCCTTGTTTAGATCTTCCTAGTTCTAAGTTTACCAACATTTCTCCATCTTCACATCCAATATCTCTGTACCTACCAAAATTACAAAGAGAGAGAACAGGGAGACAGCAAATTCAATCCGATGGCGGAAGTGGCATTGGCTAGCTTACGATTGGCAGCATCACCGATCCTGAACAAGCTCCTCGCTGACGCTTCAACATACCTTGGAGTGGACATGGCGAGTGAGCTCCGTGAACTGGAGACCAGCATCATGCCGCAGTTCGAGCTGTTGATTGAAGAAGCTGAGAAGGGCAACCACAGGGCCAAGCTGGACAAATGGATACGGGAGCTCAAAGAAGCCTTGTACAATGCCGAGGACCTGCTGGATGAGCATGAGTACGACATCCTCAAGCGCAAGGTGAAGAACGGAGGCGAGGATCCTTCTCCAGATCTAGAGCATGCCTCCTCCATCGGTTCCATCATTAAGAAACCTATGCGCGCAGCATCAAGCAGCTTGTCCAATCTGCGACCGAAGAACATAAAGCTTGTACGCCAGCTGAAGGAGCTCAAGGCCATCCTAGCGAAAGCAAGGGACTTCCGTGAAATGCTTGGCTTACCGGCTGGTAGCAGTGTAGAGGGGGCACAAACTGGACATACAAAAACAGTGGTCGTTACTGCAGCGACATCAACCCCACCACCAAAGGTGTTTGGTCGCGACGCGGACCGCGATCGCATTGTTGATCTTCTTACCCAACACAAGACTTGTGCTGAGGCTAGCCGTTTCGTTGTCTCCATTGTTGGACCTGGAGGCATGGGGAAATCCACCTTGGCTCAGTATGTTTACAATGACAAGACGATACAAGAACATTTTGACGTCACGATGTGGGTTTGCATCTCACGCAAACTTGATGTCCATCGTCATACAAGGGAGATCATCGAGTCTGCAACAAAAGAGAAGTGTCAAAGGGTTGGTAATATGGACGTTCTCCAGTACAAACTAAAAGAAATACTGCAGAAAAAAGAGAAAGTCCTGCTTGTGTTGGACGACATTTGGTTCGATAAATCCCAGGACGTTGAGGAATGGGACCTGCTACTTGCTCCCATACTATCTTCTCAGAATGGGGCAACCAAAGTTCTGGTAACTTCTCGATCTAAGACACTTCCACCTGCTCTTTTCTCTGAAGATGTCATTGATTTGGAAAATATGAAAGATACTGAGTTCCAGGCACTCTTCAAACACCATGCTTTCTCTGGAGCCACAATTCGAGACCTCCAGATGTGTGGCTGGTTCGAAGAGCATGCAGTGAAGATTACTGAAAGGCTTGGAAGATCTCCTTTGGCAGCAAAAGTTGTAGGTTCCAACTTGAAAAGGGTGATGAATATCGATGATTGGAAAGGTGCTCTCACTATAAAGATAGACAATTTAAGTGAACCTAAGAGAGCTCTGTTGTGGAGTTATCAGAAATTAGATCCATGTCTTCAGAGATGCTTTCTGTATTGCAGTTTATTTCCAAAAGGTTACAAATACATAATTGACGAGTTGGTTCACCTTTGGGTTGCAGAGGGATTTATTGATGCACGTGATACGAATAAAAGAATGGAAGATACCGGCATGGATTACTTCAAAGAGATGGTCTCTGGATCCTTTTTCCAACCATTTTCTGAAAGATTTGATAGTACGGTGTACATTATGCATGACCTCCTTCATGATTTGGCAGAGTCACTCTCTAGAGAAGACTGCTTCAGATTAGAAGATGACAAGGTGAGAGAAATACCATGCACTGTTCGGCATTTATCTGTTCGTGTTGAGAGTATTATACAACATAAGCCAAGTGTCTGCAAGCTACAACATTTGCGAACTCTTATCTGCATTGACCCACTAGTGGATGTTGGGAGCAATATTTTCGAGCAGGTAGTATTGAATCTGAAGAAGTTACAAGTACTTTATTTGTCGTTTTACAACACTAGAAAGTTGCCAGAATCAATCGGTCAGCTAAAGCATCTTCGGTATTTGAACATCAAGAAGACATTGATTTCTGAACTACCAAAATCATTATGCGATCTTTACCATTTAGAGTTACTTTATTTGCGTCCGAAATCGAGGTTACCTGACAAACTCTGCAATTTATGTAAGTTACGACATCTTCAAATGTACTCTGATGGATTGGAGCTGTCACGGATTCCTGACATAGGCCGGCTAACTTTGCTTCAACGTATTGATAGTTTTCACGTCCTAAAACAGAAGGGACATGAGTTGCGACAGCTCAGGAACATGAACGAAATTGGTGGGTATTTATCGCTCAGAAATCTTGAGAATGTGATTGGCAAGGATGAAGCTTTAGAGTCGAAGCTGTATCAGAAAAGTCGTCTTGAAGGATTGACGCTTGAGTGGAATGATGCGAATAACATGAATCCAGAGAATTGTTTACATGTTGAGATTCTTGAAGGCCTCGTGCCACCACCACAGTTGGAGCACTTATCAATTAGAGGTTACAAATCGACTACCTATCCAAGCTGGTTACTCGAGGGTTCCCAGCTTGAGAATCTAGAATCCTTTGCTCTTTATAACTGCAGCGCTTTAGAAAGGCTACCATCCAATACCAAGCTCTTTAGGCGTTGCCGTGAATTGAGCCTTAAGAATCTCCCGAATATGAAGGAACTATCATTTCTTCCAGCAGGTCTCACAACGTTGTCAATTCGTAGGTGCCCACTGCTTCTCTTCGTTACCAATGATGAACTGGAGTATCATGATCATAGTGAGCATATCCACTAGGACAGAGCAACTGGTTGCACAATTTGCTTTGGTTGGGGTGATGGGCCCATTTTTAGATGCACTGTCATCGGATCATTCATCTATGAAGCAGTTGGCAGCATTGATGGACTCTGATATATCAAAAAATCTTCAAACCATTGAACGCGCTCTAGAAAGAGAAGATGAAGTAGTGATGACCAAGGATGTCATCAAGGCATGGATGCGTTGCCACGAGCAGAGGATGAGACTCATTTATGCAAGGAGGATTGGGCTACCATTGGTCCCACCGTCAGGACTTAGTGATCTCTCCCTTAAATCATGCACAATTACAGATACAGCTCTATCCATATGCCTTGGTGGCCTAGCTTCTCTGAGATGTTTGTCCTTATCCAAGATCATGTCTTTAACTACTCTTCCGTCAGAAGAGGTCCTGAAAAAATTGACAAAGCTTGATTGTTTGATCATTGATGCCTGCTTGTTTCTCGGATCGTTGGGGGGCTTGCGAGCTGCTACTTCCCTTTCGCATTTAAGGTTGAACTCTTGCCCTGCTTTAGAGTTGGCACACGGTGCAGAATTCATGCCAGCGTCCCTTAAGAGACTCGCAATAAGTTGTTGTGTGCTTGCACCCGACTTGTTCTGTGGCCACTGGCCGCATCTGAAAGATATTTTCATACACGACTGCAGAAGCTCTGTGTCGTTGTTTGTTGGTGATCTTAGCTCCCTGAAAGAATTCACACTTTATCATTTGCCAGATTTATGTGTGCTTGAAGGCCTGTCTTCCCTTCAACTTCACAGCGTGTGTTTGGTAGATATCCCGAAGCTTACTGCTGAGTGTGTGTCAAAGTTTCGTGTCCAGGATTTACTGCATGTTAGCAGCTCTGCGGTGTTGAACAACATCATCTCGGCTGAAGGTATCACAGTTCAGCGTCTCTCATCCTTCAAAGGTGCAAGGAGCCATCCGTTTCATTTGAAGAAACTATAAATTCCTCATCTGTCAAGCAGCTGCGATTAGAAAGTTGTCAAATGAGTTCCCTGCAGGGAAATCTGAAGTGCCTCTCCAGACTGGAGGAACTTGACATCTTCAGTTGCCCCAATATATCATGTTTGCCAGATCTCCCATCCTCCCTTCAGCGCATATCCATAGTGGACTGCCCCAATATATCATCTTTGCCAGATCTCCCATCCTCCCTGCAGCACATATACATACGTGACTGTCCACTACTGAAGGAGAGCTGTAGAGTACCCGATGGGGAAAGCTGGCCAAAGATTGCGCATATTCGTTGGAAGCGTATTGACTGAATTATGCTTCAGATTCACAAGAACAAAGGAACAGAAAGTGCTGTTCCTTCGCCCCCTGCATTGCAGACCTCCAGAGTCTCACACAGCTGTTTGGCTATGAACGAGAGGGACCGGTTCGTATTGACTGATCGGTCTGAGCTTCTTCTTCTTATTCTTGTGTGGTTGCATTTCGCTGGCTGCTGGCTATGGTCTATATGCCTATGGACTATTACCGAGATGTATCTGTGTATTTGGATCTTGCTCTGTTATGTTTCCTGTTTGTTCTTTTGGACTGAATTGCTTGTAGTAGCTGTTATCTATGGTGTGCAACGTCTACTGTATTACTGCACCGGTGAAGCTTTGTATGGGAGTACCATGGTGCTTTTGAACTCAGGCTACTGTTATCCTCTCTTGGAGTGTTTCCTTTTGGACTTGGTTTCTATTGAGTATTGACTGTAAGCCTGTAACTATTATCTCTTGTATGATGAGATGCAAGATAAGGCAAACCTGCAATAGCTCTAGTCA
CDS Sequence
- >LOC_Os05g30220.1
ATGGCGGAAGTGGCATTGGCTAGCTTACGATTGGCAGCATCACCGATCCTGAACAAGCTCCTCGCTGACGCTTCAACATACCTTGGAGTGGACATGGCGAGTGAGCTCCGTGAACTGGAGACCAGCATCATGCCGCAGTTCGAGCTGTTGATTGAAGAAGCTGAGAAGGGCAACCACAGGGCCAAGCTGGACAAATGGATACGGGAGCTCAAAGAAGCCTTGTACAATGCCGAGGACCTGCTGGATGAGCATGAGTACGACATCCTCAAGCGCAAGGTGAAGAACGGAGGCGAGGATCCTTCTCCAGATCTAGAGCATGCCTCCTCCATCGGTTCCATCATTAAGAAACCTATGCGCGCAGCATCAAGCAGCTTGTCCAATCTGCGACCGAAGAACATAAAGCTTGTACGCCAGCTGAAGGAGCTCAAGGCCATCCTAGCGAAAGCAAGGGACTTCCGTGAAATGCTTGGCTTACCGGCTGGTAGCAGTGTAGAGGGGGCACAAACTGGACATACAAAAACAGTGGTCGTTACTGCAGCGACATCAACCCCACCACCAAAGGTGTTTGGTCGCGACGCGGACCGCGATCGCATTGTTGATCTTCTTACCCAACACAAGACTTGTGCTGAGGCTAGCCGTTTCGTTGTCTCCATTGTTGGACCTGGAGGCATGGGGAAATCCACCTTGGCTCAGTATGTTTACAATGACAAGACGATACAAGAACATTTTGACGTCACGATGTGGGTTTGCATCTCACGCAAACTTGATGTCCATCGTCATACAAGGGAGATCATCGAGTCTGCAACAAAAGAGAAGTGTCAAAGGGTTGGTAATATGGACGTTCTCCAGTACAAACTAAAAGAAATACTGCAGAAAAAAGAGAAAGTCCTGCTTGTGTTGGACGACATTTGGTTCGATAAATCCCAGGACGTTGAGGAATGGGACCTGCTACTTGCTCCCATACTATCTTCTCAGAATGGGGCAACCAAAGTTCTGGTAACTTCTCGATCTAAGACACTTCCACCTGCTCTTTTCTCTGAAGATGTCATTGATTTGGAAAATATGAAAGATACTGAGTTCCAGGCACTCTTCAAACACCATGCTTTCTCTGGAGCCACAATTCGAGACCTCCAGATGTGTGGCTGGTTCGAAGAGCATGCAGTGAAGATTACTGAAAGGCTTGGAAGATCTCCTTTGGCAGCAAAAGTTGTAGGTTCCAACTTGAAAAGGGTGATGAATATCGATGATTGGAAAGGTGCTCTCACTATAAAGATAGACAATTTAAGTGAACCTAAGAGAGCTCTGTTGTGGAGTTATCAGAAATTAGATCCATGTCTTCAGAGATGCTTTCTGTATTGCAGTTTATTTCCAAAAGGTTACAAATACATAATTGACGAGTTGGTTCACCTTTGGGTTGCAGAGGGATTTATTGATGCACGTGATACGAATAAAAGAATGGAAGATACCGGCATGGATTACTTCAAAGAGATGGTCTCTGGATCCTTTTTCCAACCATTTTCTGAAAGATTTGATAGTACGGTGTACATTATGCATGACCTCCTTCATGATTTGGCAGAGTCACTCTCTAGAGAAGACTGCTTCAGATTAGAAGATGACAAGGTGAGAGAAATACCATGCACTGTTCGGCATTTATCTGTTCGTGTTGAGAGTATTATACAACATAAGCCAAGTGTCTGCAAGCTACAACATTTGCGAACTCTTATCTGCATTGACCCACTAGTGGATGTTGGGAGCAATATTTTCGAGCAGGTAGTATTGAATCTGAAGAAGTTACAAGTACTTTATTTGTCGTTTTACAACACTAGAAAGTTGCCAGAATCAATCGGTCAGCTAAAGCATCTTCGGTATTTGAACATCAAGAAGACATTGATTTCTGAACTACCAAAATCATTATGCGATCTTTACCATTTAGAGTTACTTTATTTGCGTCCGAAATCGAGGTTACCTGACAAACTCTGCAATTTATGTAAGTTACGACATCTTCAAATGTACTCTGATGGATTGGAGCTGTCACGGATTCCTGACATAGGCCGGCTAACTTTGCTTCAACGTATTGATAGTTTTCACGTCCTAAAACAGAAGGGACATGAGTTGCGACAGCTCAGGAACATGAACGAAATTGGTGGGTATTTATCGCTCAGAAATCTTGAGAATGTGATTGGCAAGGATGAAGCTTTAGAGTCGAAGCTGTATCAGAAAAGTCGTCTTGAAGGATTGACGCTTGAGTGGAATGATGCGAATAACATGAATCCAGAGAATTGTTTACATGTTGAGATTCTTGAAGGCCTCGTGCCACCACCACAGTTGGAGCACTTATCAATTAGAGGTTACAAATCGACTACCTATCCAAGCTGGTTACTCGAGGGTTCCCAGCTTGAGAATCTAGAATCCTTTGCTCTTTATAACTGCAGCGCTTTAGAAAGGCTACCATCCAATACCAAGCTCTTTAGGCGTTGCCGTGAATTGAGCCTTAAGAATCTCCCGAATATGAAGGAACTATCATTTCTTCCAGCAGGTCTCACAACGTTGTCAATTCGTAGGTGCCCACTGCTTCTCTTCGTTACCAATGATGAACTGGAGTATCATGATCATAGTGAGCATATCCACTAG
Protein Sequence
- >LOC_Os05g30220.1
MAEVALASLRLAASPILNKLLADASTYLGVDMASELRELETSIMPQFELLIEEAEKGNHRAKLDKWIRELKEALYNAEDLLDEHEYDILKRKVKNGGEDPSPDLEHASSIGSIIKKPMRAASSSLSNLRPKNIKLVRQLKELKAILAKARDFREMLGLPAGSSVEGAQTGHTKTVVVTAATSTPPPKVFGRDADRDRIVDLLTQHKTCAEASRFVVSIVGPGGMGKSTLAQYVYNDKTIQEHFDVTMWVCISRKLDVHRHTREIIESATKEKCQRVGNMDVLQYKLKEILQKKEKVLLVLDDIWFDKSQDVEEWDLLLAPILSSQNGATKVLVTSRSKTLPPALFSEDVIDLENMKDTEFQALFKHHAFSGATIRDLQMCGWFEEHAVKITERLGRSPLAAKVVGSNLKRVMNIDDWKGALTIKIDNLSEPKRALLWSYQKLDPCLQRCFLYCSLFPKGYKYIIDELVHLWVAEGFIDARDTNKRMEDTGMDYFKEMVSGSFFQPFSERFDSTVYIMHDLLHDLAESLSREDCFRLEDDKVREIPCTVRHLSVRVESIIQHKPSVCKLQHLRTLICIDPLVDVGSNIFEQVVLNLKKLQVLYLSFYNTRKLPESIGQLKHLRYLNIKKTLISELPKSLCDLYHLELLYLRPKSRLPDKLCNLCKLRHLQMYSDGLELSRIPDIGRLTLLQRIDSFHVLKQKGHELRQLRNMNEIGGYLSLRNLENVIGKDEALESKLYQKSRLEGLTLEWNDANNMNPENCLHVEILEGLVPPPQLEHLSIRGYKSTTYPSWLLEGSQLENLESFALYNCSALERLPSNTKLFRRCRELSLKNLPNMKELSFLPAGLTTLSIRRCPLLLFVTNDELEYHDHSEHIH*