Information report for YGL1;OsCHLG
Gene Details
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Functional Descriptions
- Moreover, the expression of some nuclear genes associated with Chl biosynthesis or chloroplast development was also affected in YGL1 seedlings.
- In this study, a rice (Oryza Sativa) Chl-deficient mutant, yellow-green leaf1 (YGL1), was isolated, which showed yellow-green leaves in young plants with decreased Chl synthesis, increased level of tetrapyrrole intermediates, and delayed chloroplast development.
Functional Keywords
- seedling , leaf , chloroplast
Literature and News
- A chlorophyll-deficient rice mutant with impaired chlorophyllide esterification in chlorophyll biosynthesis . DOI: 10.1104/pp.107.100321 ; PMID: 17535821
- A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice . DOI: 10.1073/pnas.1705689114 ; PMID: 28607067
Gene Resources
- UniProt: Q5W6H5
- EMBL: AC136221, AK099004, AP008211
- AlphaFoldDB: Q5W6H5
- EnsemblPlants: Os05t0349700-01, Os05t0349700-02
- Gramene: Os05t0349700-01, Os05t0349700-02
- KEGG: dosa:Os05g0349700
- Orthologous matrix: QDMYFLR
- InterPro: IPR000537, IPR006372, IPR011799
- PANTHER: PTHR42723, PTHR42723:SF1
- Gene3D: 1.10.357.140, 1.20.120.1780
- OrthoDB: Q5W6H5
- SWISS-MODEL: Q5W6H5
- Conserved Domain Database: cd13958
- eggNOG: ENOG502QQMP
Sequences
cDNA Sequence
- >LOC_Os05g28200.1
GGGTCAAAAACATCGCGTTATCCTTCCCTCCTCTCGCCTCGGTGGTGTGCGTCTTCCCCACCCACCCCCAGTCTCCAATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGATTGATGGTTCTCTGCAACTGTTGGTGGAGCTAGGTTCAGCAGCTATGTTCGCGAGTGTATTAGCGCTCTTTTGGCGGTGCTGGGTAGTAGAATGTAGAATCGTTTCTTGTTGATTCCCTGAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTTGCTACTTTGCCGCCGATGTTGTAGGGTGTGTAGACAGACTGTAGATGAATAATGTCAGTAACACCTGTGGGGGGTTCAGTGCTAGTGGGCTGCAAAACTTGAGCACTGCTTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAACATAAAGCTGACCAAGGTGAAGTAATATTGATGCATTGTGCGCTGCATTTAATTT - >LOC_Os05g28200.2
GGGTCAAAAACATCGCGTTATCCTTCCCTCCTCTCGCCTCGGTGGTGTGCGTCTTCCCCACCCACCCCCAGTCTCCAATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGATTGATGGTTCTCTGCAACTGTTGGTGGAGCTAGGTTCAGCAGCTATGTTCGCGAGTGTATTAGCGCTCTTTTGGCGGTGCTGGGTAGTAGAATGTAGAATCGTTTCTTGTTGATTCCCTGAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTTGCTACTTTGCCGCCGATGTTGTAGGGTGTGTAGACAGACTGTAGATGAATAATGTCAGTAACACCTGTGGGGGGTTCAGTGCTAGTGGGCTGCAAAACTTGAGCACTGCTTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAACATAAAGCTGACCAAGGTGAAGTAATATTGATGCATTGTGCGCTGCATTTAATTT
CDS Sequence
- >LOC_Os05g28200.1
ATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGA - >LOC_Os05g28200.2
ATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGA
Protein Sequence
- >LOC_Os05g28200.1
MATSHLLAAASSTAASSATFRPPLLSLRSPPPSSLRLNRRRHFQVVRAAETDKETKANAPEKAPAGGSSFNQLLGIKGAKQENDIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGAIDITQLSVAGYLFSSGKPYYALALLGLTIPQVVFQFQYFLKDPVKYDVKYQASAQPFFVLGLLVTALATSH* - >LOC_Os05g28200.2
MATSHLLAAASSTAASSATFRPPLLSLRSPPPSSLRLNRRRHFQVVRAAETDKETKANAPEKAPAGGSSFNQLLGIKGAKQENDIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGAIDITQLSVAGYLFSSGKPYYALALLGLTIPQVVFQFQYFLKDPVKYDVKYQASAQPFFVLGLLVTALATSH*