Gene Details:
- MSU gene ID: LOC_Os05g28200
- RAPdb gene ID: Os05g0349700
- Gene Symbol: YGL1 OsCHLG
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Moreover, the expression of some nuclear genes associated with Chl biosynthesis or chloroplast development was also affected in YGL1 seedlings.
- In this study, a rice (Oryza Sativa) Chl-deficient mutant, yellow-green leaf1 (YGL1), was isolated, which showed yellow-green leaves in young plants with decreased Chl synthesis, increased level of tetrapyrrole intermediates, and delayed chloroplast development.
Function-related keywords:
- seedling , leaf , chloroplast
Literature:
- A chlorophyll-deficient rice mutant with impaired chlorophyllide esterification in chlorophyll biosynthesis . DOI: 10.1104/pp.107.100321 ; PMID: 17535821
- A recruiting protein of geranylgeranyl diphosphate synthase controls metabolic flux toward chlorophyll biosynthesis in rice . DOI: 10.1073/pnas.1705689114 ; PMID: 28607067
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g28200.1
GGGTCAAAAACATCGCGTTATCCTTCCCTCCTCTCGCCTCGGTGGTGTGCGTCTTCCCCACCCACCCCCAGTCTCCAATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGATTGATGGTTCTCTGCAACTGTTGGTGGAGCTAGGTTCAGCAGCTATGTTCGCGAGTGTATTAGCGCTCTTTTGGCGGTGCTGGGTAGTAGAATGTAGAATCGTTTCTTGTTGATTCCCTGAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTTGCTACTTTGCCGCCGATGTTGTAGGGTGTGTAGACAGACTGTAGATGAATAATGTCAGTAACACCTGTGGGGGGTTCAGTGCTAGTGGGCTGCAAAACTTGAGCACTGCTTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAACATAAAGCTGACCAAGGTGAAGTAATATTGATGCATTGTGCGCTGCATTTAATTT - >LOC_Os05g28200.2
GGGTCAAAAACATCGCGTTATCCTTCCCTCCTCTCGCCTCGGTGGTGTGCGTCTTCCCCACCCACCCCCAGTCTCCAATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGATGAAAGCAGCAATCGCCCTGGACTGTGATTCTGTGACAGCGAAGTTTTGGGTGGAAGATGCAGATTGATGGTTCTCTGCAACTGTTGGTGGAGCTAGGTTCAGCAGCTATGTTCGCGAGTGTATTAGCGCTCTTTTGGCGGTGCTGGGTAGTAGAATGTAGAATCGTTTCTTGTTGATTCCCTGAACTGATCCAGATCAAACATCTTCTAAAGGTTCTGCGATGCAATGCTAGCTGCAGACGGGAGATGGTACAGGGGGTCGTTTTGCTACTTTGCCGCCGATGTTGTAGGGTGTGTAGACAGACTGTAGATGAATAATGTCAGTAACACCTGTGGGGGGTTCAGTGCTAGTGGGCTGCAAAACTTGAGCACTGCTTCGATCAAATTGTGTCTTTGATTATGAAATTATGGAATCCAGCACAGGCAGGTAATAATTTCGTAATAGAGCATAAACAATTTGTGACCTTAGGTGCGAAGAACATAAAGCTGACCAAGGTGAAGTAATATTGATGCATTGTGCGCTGCATTTAATTT
CDS Sequence
- >LOC_Os05g28200.1
ATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGA - >LOC_Os05g28200.2
ATGGCCACCTCCCACCTCCTCGCCGCCGCCTCCTCCACCGCCGCCTCCTCCGCCACCTTCCGCCCTCCCCTCCTCAGCCTCCGCTCCCCGCCGCCCTCTTCTCTCCGCCTCAACCGCAGGCGCCACTTCCAGGTGGTCCGCGCGGCCGAGACCGACAAAGAGACGAAGGCCAATGCGCCCGAGAAAGCTCCCGCGGGAGGCTCCAGCTTCAACCAGCTGCTCGGCATCAAGGGCGCCAAGCAAGAGAACGACATATGGAAGATTCGCCTTCAACTTACTAAGCCAGTGACATGGCCTCCGCTTGTATGGGGAGTGCTTTGTGGAGCAGCTGCCTCTGGAAATTTCCACTGGACAGTTGAAGATGTTGCAAAATCTATTGTCTGCATGATAATGTCTGGTCCATGTCTTACAGGATACACACAGACAATTAACGACTGGTATGATCGAGATATAGATGCGATAAATGAACCTTACCGTCCTATTCCTTCAGGCGCTATATCAGAAAATGAGGTCATTACTCAAATTTGGGCACTGTTGTTAGCAGGGCTTGGCCTGGGTGCTCTGTTAGATGTATGGGCAGGACATGATTTTCCTATTATTTTTTATCTTGCTGTTGGTGGGTCCTTGCTTTCTTACATATATTCAGCTCCACCTCTGAAGCTCAAGCAGAATGGATGGATTGGAAACTTTGCTCTTGGTGCGAGCTACATTGGCTTGCCCTGGTGGGCTGGCCAGGCATTATTTGGAACCCTTACTCCTGATATTGTTGTCCTGACTTCTTTGTATAGCATAGCTGGGCTAGGGATTGCTATTGTAAATGACTTTAAGAGTGTTGAGGGAGATAGAGCTCTGGGGCTTCAGTCACTCCCGGTTGCTTTTGGTATGGAAACTGCAAAGTGGATATGTGTAGGAGCGATTGACATAACTCAATTATCCGTTGCAGGCTACCTTTTCAGTTCCGGCAAGCCTTATTATGCCCTGGCACTGCTAGGACTCACAATTCCTCAGGTGGTCTTTCAGTTCCAATACTTCCTCAAGGACCCTGTGAAGTATGACGTCAAATACCAGGCAAGCGCGCAACCGTTCTTCGTCTTGGGCCTTCTGGTGACCGCCCTTGCAACCAGCCACTGA
Protein Sequence
- >LOC_Os05g28200.1
MATSHLLAAASSTAASSATFRPPLLSLRSPPPSSLRLNRRRHFQVVRAAETDKETKANAPEKAPAGGSSFNQLLGIKGAKQENDIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGAIDITQLSVAGYLFSSGKPYYALALLGLTIPQVVFQFQYFLKDPVKYDVKYQASAQPFFVLGLLVTALATSH* - >LOC_Os05g28200.2
MATSHLLAAASSTAASSATFRPPLLSLRSPPPSSLRLNRRRHFQVVRAAETDKETKANAPEKAPAGGSSFNQLLGIKGAKQENDIWKIRLQLTKPVTWPPLVWGVLCGAAASGNFHWTVEDVAKSIVCMIMSGPCLTGYTQTINDWYDRDIDAINEPYRPIPSGAISENEVITQIWALLLAGLGLGALLDVWAGHDFPIIFYLAVGGSLLSYIYSAPPLKLKQNGWIGNFALGASYIGLPWWAGQALFGTLTPDIVVLTSLYSIAGLGIAIVNDFKSVEGDRALGLQSLPVAFGMETAKWICVGAIDITQLSVAGYLFSSGKPYYALALLGLTIPQVVFQFQYFLKDPVKYDVKYQASAQPFFVLGLLVTALATSH*