Gene Details:
- MSU gene ID: LOC_Os05g19270
- RAPdb gene ID: Os05g0274200
- Gene Symbol: MSH2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- MSH2 plays an essential role by forming a heterodimer with other proteins in the anti-recombination activity in eukaryotes by recognizing mismatches present in the heteroduplex recombination intermediates.
Function-related keywords:
Literature:
- Disruption in the DNA Mismatch Repair Gene MSH2 by CRISPR- Cas9 in Indica Rice Can Create Genetic Variability . DOI: 10.1021/acs.jafc.1c00328 ; PMID: 33789420
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g19270.1
ATCTTCTCCTTTTTGCCGCGAAATACCCACCTGGGCGCGCGCCATCCTCTCCACTGCCCCCTAAAACACTAACCCTTTTCCCGCCCCACCCCGCCCGCGCGTACCTACGCATTTCGTCGAACACATCGCCTGCGTCCCCCATCGCCACCACCTCGCCCGATCCAGCCCGGCGATCTGCGGCGGGATGGAGGGCGACGACTTCTTGCCGGAGGGCGGCAAGCTCCCCGAGCTCAAGCTAGATGCGAGGCAAGCGCAGGGCTTCATCTCTTTCTTCAAGAAACTGCCGCAGGATTCGAGGGCTATTCGTCTCTTCGATCGGCGGGATTATTACACTGCTCATGGAGAGAATGCCACATTCATTGCAAAAATATACTATCACACAATGTCTGCCTTACGCCAATTAGGTAGCAACTCTGATGGACTCTCAAGTGTCAGTGTGAGCAAGACTATGTTTGAGACCATCGCCCGCAACCTTTTGTTAGAGAGGACAGACCGTACATTGGAACTCTATGAGGGAAGTGGGTCTAGTTGGAGGTTAACAAAATCTGGAACACCTGGAAATATTGGCAGTTTTGAAGATATTCTGTTTGCAAACAATGACATGCAAGATTCTCCGGTAACTGTTGCATTGTTTCCTGTGTTCCAGGAAGGACAACTATATGTAGGTCTTAGTTTTGTTGATTTGACAAACAGGAAGCTTGGGTTGTCTGAGTTTCCCGAAGATAGTCGATTCACAAATGTAGAGTCAGCCCTTGTTGCATTAGGTTGCAAGGAGTGTCTTCTCCCAGCAGATTGTGAGAAATCTATAGATTTGAAGCCTCTTCAGGATGCTATCACTAACTGCAATGTTCTATTAACTGAAAGAAAGAAGGTTGAATTTAAATCCAGAGATCTTGTGCAGGATCTTGGTAGAATAATCAGAGGTCCTGTTGAGCCAGTTCGTGATCTTGTATCTCAGTTTGACTATGCATTGGGTGCCCTTGGAGCTCTAGTTTCATATGCTGAGTTGCTAGCAGATGATACAAACTACGGAAATTACACAATTGAGAAATACAGTTTGGACCGCTACATGCGTCTTGATTCTGCTGCTGTGCGAGCATTGAATATTGCCGAAGCTAAAACTGATGTAAACAAGAACTTCAGTTTGTTTGGTTTGATGAACAGAACCTGTACAGTAGGTATGGGAAAGAGACTGCTTAACAGATGGCTGAAACAACCTCTGCTAGATGTAAATGAAATCAATAACAGATTAGATATGGTTCAGGCTTTCGTAGAAGATCCAGAGCTTCGTCAGGGACTTAGGTACCAACTCAAAAGAATGTCGGACATTGACCGTCTGACACATGCTCTGCGGAAGAGAACAGCCAATCTGCAGCCTGTTGTCAAGCTCTACCAGTCCTGCATTAGAGTCTCATACATCAAGAATGTTCTTCAACAATATGATGGCAGTTTTTCTGCGCTGATAAGGACAAAGTTTCTTAATTCTTTAGATGAGTGGCTGACAGAGGATAGGTTTGGTAGGTTTGCTTCTCTTGTTGAGACAGCTATTGACCTTGATCAACTTGAGAATGGTGAGTATAGGATATCTCCCCGATATTCTTCTGATTTGGCTGTGCTGAAGGATGAGCTTTCTGAAGTTGAAAATCACATCAACAATTTGCACAAGCATACAGCTGCTGATCTGGATCTTACTATTGATAAGCAATTGAAGCTAGAAAAAGGGCAGCTTGGCCATGTGTTCAGAATCTCAAAGAAAGATGAACAGAAGGTTAGGAAGAAACTCACTAGCAATTACATAATCATAGAAACTCGTAAGGATGGTGTGAAGTTCACAAGCTCCAAGCTTAAAAAGTTAGGCGACCAATACCAGGCACTGCTTGGTGAGTACACAAGTTGTCAGAAAAAGGTTGTTGATGATGTAGTAAGAGTTTCAGCCTCCTTCTCAGAGGTATTTGAAAACTTTGCTGCGATACTATCTGAGTTGGATGTTTTACAAAGTTTTGCTGATTTAGCAACAAGTTCCCCAATTCCTTATGTAAGACCAGAAATCACAGCATCGGAGGAAGGAGATATCATTTTAGAAGGTAGCAGACATCCTTGTCTGGAGGCCCAAGATGGTGTTAACTTTATACCAAATGATTGCACTTTGGTGAGAGAAAAAAGTTGGTTTCAGATCATCACTGGGCCAAACATGGGTGGAAAGTCCACTTTTATACGACAGGTTGGTGTGAATGTCCTGATGGCACAAGTTGGATCGTTCGTTCCATGTGATCGGGCGAGCATTAGTGTGAGAGATTGTATTTTTGCTCGTGTTGGTGCTGGTGATTGCCAGCTACGTGGTGTTTCAACCTTTATGCAAGAAATGCTTGAAACAGCATCCATCTTGAAAGGTGCATCGGACAAGTCTCTTATTATTATTGATGAGTTGGGGCGTGGAACTTCCACATATGATGGATTTGGTCTTGCATGGGCTATCTGTGAGCATCTTGTGGAAGTGACTAGAGCACCTACGTTGTTTGCCACGCATTTTCATGAATTAACTGCATTAGGACACAAAAGTGGTGATGAGCACCAACACGTTCCAAATTTGGGAATTGCAAATTACCATGTGGGTGCACATATAGACCCATCAAGTCGGAAGTTAACTATGCTTTATAAGGTTGAACCCGGTGCATGTGACCAAAGCTTTGGTATCCACGTTGCAGAATTCGCTAATTTTCCAGAAGCTGTTGTTGCTCTTGCAAAAAGCAAAGCAGAAGAATTAGAAGATTTTTCAACTGCGCCCAATTTTTCCGATGATTCAAAAGATGAGGTTGGATCAAAACGCAAGAGGGTATTTAGCCCAGACGATGTGACTAGAGGAGCTGCTCGCGCTCGCCTTTTGTTGGAGGAATTGGCCTCATTGCCTCTAGACGAGATGGATGGCACCAAGGCCGCAGAAACCGTCACCAAACTGAAATCCGACTTCGAGAAAGATGCAGCTGATAATCCTTGGCTTCAGCAGTTCCTTTGAAGGAAATCATTCACTGCTTGAATGGAGATTTTGTTTTGCAAGTTAGAATCACTGAAAGTAAGGCTGATGCAAGGATCATCTGATCCTCTTTTTGTCCATATCCATCAGCAGATTACCATATATGTAAATTATCTAGGCTTAGCATCAGATCTATGCTATGGAAAATGATCTGCCAACTGCCAAGTGCTTCAGCTAGCACACTGCGAGTAAACATAGCCACTGTATCTGTACGTATTATCTTGAGGTAAAGCAATTGATGAGCTTGTCTTGCACCAATGATTCACTTGATCCTTCACAGGATACAAGGAAAAAAAAGTTGGCAAGACTAGCCCAAAAGCATCCAAGACCATTCTCGAGGGAATATGGGGTGCTCAATCC
CDS Sequence
- >LOC_Os05g19270.1
ATGGAGGGCGACGACTTCTTGCCGGAGGGCGGCAAGCTCCCCGAGCTCAAGCTAGATGCGAGGCAAGCGCAGGGCTTCATCTCTTTCTTCAAGAAACTGCCGCAGGATTCGAGGGCTATTCGTCTCTTCGATCGGCGGGATTATTACACTGCTCATGGAGAGAATGCCACATTCATTGCAAAAATATACTATCACACAATGTCTGCCTTACGCCAATTAGGTAGCAACTCTGATGGACTCTCAAGTGTCAGTGTGAGCAAGACTATGTTTGAGACCATCGCCCGCAACCTTTTGTTAGAGAGGACAGACCGTACATTGGAACTCTATGAGGGAAGTGGGTCTAGTTGGAGGTTAACAAAATCTGGAACACCTGGAAATATTGGCAGTTTTGAAGATATTCTGTTTGCAAACAATGACATGCAAGATTCTCCGGTAACTGTTGCATTGTTTCCTGTGTTCCAGGAAGGACAACTATATGTAGGTCTTAGTTTTGTTGATTTGACAAACAGGAAGCTTGGGTTGTCTGAGTTTCCCGAAGATAGTCGATTCACAAATGTAGAGTCAGCCCTTGTTGCATTAGGTTGCAAGGAGTGTCTTCTCCCAGCAGATTGTGAGAAATCTATAGATTTGAAGCCTCTTCAGGATGCTATCACTAACTGCAATGTTCTATTAACTGAAAGAAAGAAGGTTGAATTTAAATCCAGAGATCTTGTGCAGGATCTTGGTAGAATAATCAGAGGTCCTGTTGAGCCAGTTCGTGATCTTGTATCTCAGTTTGACTATGCATTGGGTGCCCTTGGAGCTCTAGTTTCATATGCTGAGTTGCTAGCAGATGATACAAACTACGGAAATTACACAATTGAGAAATACAGTTTGGACCGCTACATGCGTCTTGATTCTGCTGCTGTGCGAGCATTGAATATTGCCGAAGCTAAAACTGATGTAAACAAGAACTTCAGTTTGTTTGGTTTGATGAACAGAACCTGTACAGTAGGTATGGGAAAGAGACTGCTTAACAGATGGCTGAAACAACCTCTGCTAGATGTAAATGAAATCAATAACAGATTAGATATGGTTCAGGCTTTCGTAGAAGATCCAGAGCTTCGTCAGGGACTTAGGTACCAACTCAAAAGAATGTCGGACATTGACCGTCTGACACATGCTCTGCGGAAGAGAACAGCCAATCTGCAGCCTGTTGTCAAGCTCTACCAGTCCTGCATTAGAGTCTCATACATCAAGAATGTTCTTCAACAATATGATGGCAGTTTTTCTGCGCTGATAAGGACAAAGTTTCTTAATTCTTTAGATGAGTGGCTGACAGAGGATAGGTTTGGTAGGTTTGCTTCTCTTGTTGAGACAGCTATTGACCTTGATCAACTTGAGAATGGTGAGTATAGGATATCTCCCCGATATTCTTCTGATTTGGCTGTGCTGAAGGATGAGCTTTCTGAAGTTGAAAATCACATCAACAATTTGCACAAGCATACAGCTGCTGATCTGGATCTTACTATTGATAAGCAATTGAAGCTAGAAAAAGGGCAGCTTGGCCATGTGTTCAGAATCTCAAAGAAAGATGAACAGAAGGTTAGGAAGAAACTCACTAGCAATTACATAATCATAGAAACTCGTAAGGATGGTGTGAAGTTCACAAGCTCCAAGCTTAAAAAGTTAGGCGACCAATACCAGGCACTGCTTGGTGAGTACACAAGTTGTCAGAAAAAGGTTGTTGATGATGTAGTAAGAGTTTCAGCCTCCTTCTCAGAGGTATTTGAAAACTTTGCTGCGATACTATCTGAGTTGGATGTTTTACAAAGTTTTGCTGATTTAGCAACAAGTTCCCCAATTCCTTATGTAAGACCAGAAATCACAGCATCGGAGGAAGGAGATATCATTTTAGAAGGTAGCAGACATCCTTGTCTGGAGGCCCAAGATGGTGTTAACTTTATACCAAATGATTGCACTTTGGTGAGAGAAAAAAGTTGGTTTCAGATCATCACTGGGCCAAACATGGGTGGAAAGTCCACTTTTATACGACAGGTTGGTGTGAATGTCCTGATGGCACAAGTTGGATCGTTCGTTCCATGTGATCGGGCGAGCATTAGTGTGAGAGATTGTATTTTTGCTCGTGTTGGTGCTGGTGATTGCCAGCTACGTGGTGTTTCAACCTTTATGCAAGAAATGCTTGAAACAGCATCCATCTTGAAAGGTGCATCGGACAAGTCTCTTATTATTATTGATGAGTTGGGGCGTGGAACTTCCACATATGATGGATTTGGTCTTGCATGGGCTATCTGTGAGCATCTTGTGGAAGTGACTAGAGCACCTACGTTGTTTGCCACGCATTTTCATGAATTAACTGCATTAGGACACAAAAGTGGTGATGAGCACCAACACGTTCCAAATTTGGGAATTGCAAATTACCATGTGGGTGCACATATAGACCCATCAAGTCGGAAGTTAACTATGCTTTATAAGGTTGAACCCGGTGCATGTGACCAAAGCTTTGGTATCCACGTTGCAGAATTCGCTAATTTTCCAGAAGCTGTTGTTGCTCTTGCAAAAAGCAAAGCAGAAGAATTAGAAGATTTTTCAACTGCGCCCAATTTTTCCGATGATTCAAAAGATGAGGTTGGATCAAAACGCAAGAGGGTATTTAGCCCAGACGATGTGACTAGAGGAGCTGCTCGCGCTCGCCTTTTGTTGGAGGAATTGGCCTCATTGCCTCTAGACGAGATGGATGGCACCAAGGCCGCAGAAACCGTCACCAAACTGAAATCCGACTTCGAGAAAGATGCAGCTGATAATCCTTGGCTTCAGCAGTTCCTTTGA
Protein Sequence
- >LOC_Os05g19270.1
MEGDDFLPEGGKLPELKLDARQAQGFISFFKKLPQDSRAIRLFDRRDYYTAHGENATFIAKIYYHTMSALRQLGSNSDGLSSVSVSKTMFETIARNLLLERTDRTLELYEGSGSSWRLTKSGTPGNIGSFEDILFANNDMQDSPVTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDSRFTNVESALVALGCKECLLPADCEKSIDLKPLQDAITNCNVLLTERKKVEFKSRDLVQDLGRIIRGPVEPVRDLVSQFDYALGALGALVSYAELLADDTNYGNYTIEKYSLDRYMRLDSAAVRALNIAEAKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPELRQGLRYQLKRMSDIDRLTHALRKRTANLQPVVKLYQSCIRVSYIKNVLQQYDGSFSALIRTKFLNSLDEWLTEDRFGRFASLVETAIDLDQLENGEYRISPRYSSDLAVLKDELSEVENHINNLHKHTAADLDLTIDKQLKLEKGQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPYVRPEITASEEGDIILEGSRHPCLEAQDGVNFIPNDCTLVREKSWFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHFHELTALGHKSGDEHQHVPNLGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKSKAEELEDFSTAPNFSDDSKDEVGSKRKRVFSPDDVTRGAARARLLLEELASLPLDEMDGTKAAETVTKLKSDFEKDAADNPWLQQFL*