Information report for MSH2
Gene Details
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Functional Descriptions
- MSH2 plays an essential role by forming a heterodimer with other proteins in the anti-recombination activity in eukaryotes by recognizing mismatches present in the heteroduplex recombination intermediates.
Functional Keywords
Literature and News
Gene Resources
- UniProt: B9FNL5
- EMBL: AP014961
- AlphaFoldDB: B9FNL5
- EnsemblPlants: Os05t0274200-01
- Gramene: Os05t0274200-01
- KEGG: osa:4338271
- Orthologous matrix: LVRFPQK
- InterPro: IPR000432, IPR007695, IPR007696
- PANTHER: PTHR11361, PTHR11361:SF35
- SUPFAM: SSF48334, SSF52540, SSF53150
- PROSITE: PS00486
- Gene3D: 1.10.1420.10, 3.30.420.110, 3.40.1170.10
- OrthoDB: B9FNL5
- SWISS-MODEL: B9FNL5
- Conserved Domain Database: cd03285
- eggNOG: KOG0219
Sequences
cDNA Sequence
- >LOC_Os05g19270.1
ATCTTCTCCTTTTTGCCGCGAAATACCCACCTGGGCGCGCGCCATCCTCTCCACTGCCCCCTAAAACACTAACCCTTTTCCCGCCCCACCCCGCCCGCGCGTACCTACGCATTTCGTCGAACACATCGCCTGCGTCCCCCATCGCCACCACCTCGCCCGATCCAGCCCGGCGATCTGCGGCGGGATGGAGGGCGACGACTTCTTGCCGGAGGGCGGCAAGCTCCCCGAGCTCAAGCTAGATGCGAGGCAAGCGCAGGGCTTCATCTCTTTCTTCAAGAAACTGCCGCAGGATTCGAGGGCTATTCGTCTCTTCGATCGGCGGGATTATTACACTGCTCATGGAGAGAATGCCACATTCATTGCAAAAATATACTATCACACAATGTCTGCCTTACGCCAATTAGGTAGCAACTCTGATGGACTCTCAAGTGTCAGTGTGAGCAAGACTATGTTTGAGACCATCGCCCGCAACCTTTTGTTAGAGAGGACAGACCGTACATTGGAACTCTATGAGGGAAGTGGGTCTAGTTGGAGGTTAACAAAATCTGGAACACCTGGAAATATTGGCAGTTTTGAAGATATTCTGTTTGCAAACAATGACATGCAAGATTCTCCGGTAACTGTTGCATTGTTTCCTGTGTTCCAGGAAGGACAACTATATGTAGGTCTTAGTTTTGTTGATTTGACAAACAGGAAGCTTGGGTTGTCTGAGTTTCCCGAAGATAGTCGATTCACAAATGTAGAGTCAGCCCTTGTTGCATTAGGTTGCAAGGAGTGTCTTCTCCCAGCAGATTGTGAGAAATCTATAGATTTGAAGCCTCTTCAGGATGCTATCACTAACTGCAATGTTCTATTAACTGAAAGAAAGAAGGTTGAATTTAAATCCAGAGATCTTGTGCAGGATCTTGGTAGAATAATCAGAGGTCCTGTTGAGCCAGTTCGTGATCTTGTATCTCAGTTTGACTATGCATTGGGTGCCCTTGGAGCTCTAGTTTCATATGCTGAGTTGCTAGCAGATGATACAAACTACGGAAATTACACAATTGAGAAATACAGTTTGGACCGCTACATGCGTCTTGATTCTGCTGCTGTGCGAGCATTGAATATTGCCGAAGCTAAAACTGATGTAAACAAGAACTTCAGTTTGTTTGGTTTGATGAACAGAACCTGTACAGTAGGTATGGGAAAGAGACTGCTTAACAGATGGCTGAAACAACCTCTGCTAGATGTAAATGAAATCAATAACAGATTAGATATGGTTCAGGCTTTCGTAGAAGATCCAGAGCTTCGTCAGGGACTTAGGTACCAACTCAAAAGAATGTCGGACATTGACCGTCTGACACATGCTCTGCGGAAGAGAACAGCCAATCTGCAGCCTGTTGTCAAGCTCTACCAGTCCTGCATTAGAGTCTCATACATCAAGAATGTTCTTCAACAATATGATGGCAGTTTTTCTGCGCTGATAAGGACAAAGTTTCTTAATTCTTTAGATGAGTGGCTGACAGAGGATAGGTTTGGTAGGTTTGCTTCTCTTGTTGAGACAGCTATTGACCTTGATCAACTTGAGAATGGTGAGTATAGGATATCTCCCCGATATTCTTCTGATTTGGCTGTGCTGAAGGATGAGCTTTCTGAAGTTGAAAATCACATCAACAATTTGCACAAGCATACAGCTGCTGATCTGGATCTTACTATTGATAAGCAATTGAAGCTAGAAAAAGGGCAGCTTGGCCATGTGTTCAGAATCTCAAAGAAAGATGAACAGAAGGTTAGGAAGAAACTCACTAGCAATTACATAATCATAGAAACTCGTAAGGATGGTGTGAAGTTCACAAGCTCCAAGCTTAAAAAGTTAGGCGACCAATACCAGGCACTGCTTGGTGAGTACACAAGTTGTCAGAAAAAGGTTGTTGATGATGTAGTAAGAGTTTCAGCCTCCTTCTCAGAGGTATTTGAAAACTTTGCTGCGATACTATCTGAGTTGGATGTTTTACAAAGTTTTGCTGATTTAGCAACAAGTTCCCCAATTCCTTATGTAAGACCAGAAATCACAGCATCGGAGGAAGGAGATATCATTTTAGAAGGTAGCAGACATCCTTGTCTGGAGGCCCAAGATGGTGTTAACTTTATACCAAATGATTGCACTTTGGTGAGAGAAAAAAGTTGGTTTCAGATCATCACTGGGCCAAACATGGGTGGAAAGTCCACTTTTATACGACAGGTTGGTGTGAATGTCCTGATGGCACAAGTTGGATCGTTCGTTCCATGTGATCGGGCGAGCATTAGTGTGAGAGATTGTATTTTTGCTCGTGTTGGTGCTGGTGATTGCCAGCTACGTGGTGTTTCAACCTTTATGCAAGAAATGCTTGAAACAGCATCCATCTTGAAAGGTGCATCGGACAAGTCTCTTATTATTATTGATGAGTTGGGGCGTGGAACTTCCACATATGATGGATTTGGTCTTGCATGGGCTATCTGTGAGCATCTTGTGGAAGTGACTAGAGCACCTACGTTGTTTGCCACGCATTTTCATGAATTAACTGCATTAGGACACAAAAGTGGTGATGAGCACCAACACGTTCCAAATTTGGGAATTGCAAATTACCATGTGGGTGCACATATAGACCCATCAAGTCGGAAGTTAACTATGCTTTATAAGGTTGAACCCGGTGCATGTGACCAAAGCTTTGGTATCCACGTTGCAGAATTCGCTAATTTTCCAGAAGCTGTTGTTGCTCTTGCAAAAAGCAAAGCAGAAGAATTAGAAGATTTTTCAACTGCGCCCAATTTTTCCGATGATTCAAAAGATGAGGTTGGATCAAAACGCAAGAGGGTATTTAGCCCAGACGATGTGACTAGAGGAGCTGCTCGCGCTCGCCTTTTGTTGGAGGAATTGGCCTCATTGCCTCTAGACGAGATGGATGGCACCAAGGCCGCAGAAACCGTCACCAAACTGAAATCCGACTTCGAGAAAGATGCAGCTGATAATCCTTGGCTTCAGCAGTTCCTTTGAAGGAAATCATTCACTGCTTGAATGGAGATTTTGTTTTGCAAGTTAGAATCACTGAAAGTAAGGCTGATGCAAGGATCATCTGATCCTCTTTTTGTCCATATCCATCAGCAGATTACCATATATGTAAATTATCTAGGCTTAGCATCAGATCTATGCTATGGAAAATGATCTGCCAACTGCCAAGTGCTTCAGCTAGCACACTGCGAGTAAACATAGCCACTGTATCTGTACGTATTATCTTGAGGTAAAGCAATTGATGAGCTTGTCTTGCACCAATGATTCACTTGATCCTTCACAGGATACAAGGAAAAAAAAGTTGGCAAGACTAGCCCAAAAGCATCCAAGACCATTCTCGAGGGAATATGGGGTGCTCAATCC
CDS Sequence
- >LOC_Os05g19270.1
ATGGAGGGCGACGACTTCTTGCCGGAGGGCGGCAAGCTCCCCGAGCTCAAGCTAGATGCGAGGCAAGCGCAGGGCTTCATCTCTTTCTTCAAGAAACTGCCGCAGGATTCGAGGGCTATTCGTCTCTTCGATCGGCGGGATTATTACACTGCTCATGGAGAGAATGCCACATTCATTGCAAAAATATACTATCACACAATGTCTGCCTTACGCCAATTAGGTAGCAACTCTGATGGACTCTCAAGTGTCAGTGTGAGCAAGACTATGTTTGAGACCATCGCCCGCAACCTTTTGTTAGAGAGGACAGACCGTACATTGGAACTCTATGAGGGAAGTGGGTCTAGTTGGAGGTTAACAAAATCTGGAACACCTGGAAATATTGGCAGTTTTGAAGATATTCTGTTTGCAAACAATGACATGCAAGATTCTCCGGTAACTGTTGCATTGTTTCCTGTGTTCCAGGAAGGACAACTATATGTAGGTCTTAGTTTTGTTGATTTGACAAACAGGAAGCTTGGGTTGTCTGAGTTTCCCGAAGATAGTCGATTCACAAATGTAGAGTCAGCCCTTGTTGCATTAGGTTGCAAGGAGTGTCTTCTCCCAGCAGATTGTGAGAAATCTATAGATTTGAAGCCTCTTCAGGATGCTATCACTAACTGCAATGTTCTATTAACTGAAAGAAAGAAGGTTGAATTTAAATCCAGAGATCTTGTGCAGGATCTTGGTAGAATAATCAGAGGTCCTGTTGAGCCAGTTCGTGATCTTGTATCTCAGTTTGACTATGCATTGGGTGCCCTTGGAGCTCTAGTTTCATATGCTGAGTTGCTAGCAGATGATACAAACTACGGAAATTACACAATTGAGAAATACAGTTTGGACCGCTACATGCGTCTTGATTCTGCTGCTGTGCGAGCATTGAATATTGCCGAAGCTAAAACTGATGTAAACAAGAACTTCAGTTTGTTTGGTTTGATGAACAGAACCTGTACAGTAGGTATGGGAAAGAGACTGCTTAACAGATGGCTGAAACAACCTCTGCTAGATGTAAATGAAATCAATAACAGATTAGATATGGTTCAGGCTTTCGTAGAAGATCCAGAGCTTCGTCAGGGACTTAGGTACCAACTCAAAAGAATGTCGGACATTGACCGTCTGACACATGCTCTGCGGAAGAGAACAGCCAATCTGCAGCCTGTTGTCAAGCTCTACCAGTCCTGCATTAGAGTCTCATACATCAAGAATGTTCTTCAACAATATGATGGCAGTTTTTCTGCGCTGATAAGGACAAAGTTTCTTAATTCTTTAGATGAGTGGCTGACAGAGGATAGGTTTGGTAGGTTTGCTTCTCTTGTTGAGACAGCTATTGACCTTGATCAACTTGAGAATGGTGAGTATAGGATATCTCCCCGATATTCTTCTGATTTGGCTGTGCTGAAGGATGAGCTTTCTGAAGTTGAAAATCACATCAACAATTTGCACAAGCATACAGCTGCTGATCTGGATCTTACTATTGATAAGCAATTGAAGCTAGAAAAAGGGCAGCTTGGCCATGTGTTCAGAATCTCAAAGAAAGATGAACAGAAGGTTAGGAAGAAACTCACTAGCAATTACATAATCATAGAAACTCGTAAGGATGGTGTGAAGTTCACAAGCTCCAAGCTTAAAAAGTTAGGCGACCAATACCAGGCACTGCTTGGTGAGTACACAAGTTGTCAGAAAAAGGTTGTTGATGATGTAGTAAGAGTTTCAGCCTCCTTCTCAGAGGTATTTGAAAACTTTGCTGCGATACTATCTGAGTTGGATGTTTTACAAAGTTTTGCTGATTTAGCAACAAGTTCCCCAATTCCTTATGTAAGACCAGAAATCACAGCATCGGAGGAAGGAGATATCATTTTAGAAGGTAGCAGACATCCTTGTCTGGAGGCCCAAGATGGTGTTAACTTTATACCAAATGATTGCACTTTGGTGAGAGAAAAAAGTTGGTTTCAGATCATCACTGGGCCAAACATGGGTGGAAAGTCCACTTTTATACGACAGGTTGGTGTGAATGTCCTGATGGCACAAGTTGGATCGTTCGTTCCATGTGATCGGGCGAGCATTAGTGTGAGAGATTGTATTTTTGCTCGTGTTGGTGCTGGTGATTGCCAGCTACGTGGTGTTTCAACCTTTATGCAAGAAATGCTTGAAACAGCATCCATCTTGAAAGGTGCATCGGACAAGTCTCTTATTATTATTGATGAGTTGGGGCGTGGAACTTCCACATATGATGGATTTGGTCTTGCATGGGCTATCTGTGAGCATCTTGTGGAAGTGACTAGAGCACCTACGTTGTTTGCCACGCATTTTCATGAATTAACTGCATTAGGACACAAAAGTGGTGATGAGCACCAACACGTTCCAAATTTGGGAATTGCAAATTACCATGTGGGTGCACATATAGACCCATCAAGTCGGAAGTTAACTATGCTTTATAAGGTTGAACCCGGTGCATGTGACCAAAGCTTTGGTATCCACGTTGCAGAATTCGCTAATTTTCCAGAAGCTGTTGTTGCTCTTGCAAAAAGCAAAGCAGAAGAATTAGAAGATTTTTCAACTGCGCCCAATTTTTCCGATGATTCAAAAGATGAGGTTGGATCAAAACGCAAGAGGGTATTTAGCCCAGACGATGTGACTAGAGGAGCTGCTCGCGCTCGCCTTTTGTTGGAGGAATTGGCCTCATTGCCTCTAGACGAGATGGATGGCACCAAGGCCGCAGAAACCGTCACCAAACTGAAATCCGACTTCGAGAAAGATGCAGCTGATAATCCTTGGCTTCAGCAGTTCCTTTGA
Protein Sequence
- >LOC_Os05g19270.1
MEGDDFLPEGGKLPELKLDARQAQGFISFFKKLPQDSRAIRLFDRRDYYTAHGENATFIAKIYYHTMSALRQLGSNSDGLSSVSVSKTMFETIARNLLLERTDRTLELYEGSGSSWRLTKSGTPGNIGSFEDILFANNDMQDSPVTVALFPVFQEGQLYVGLSFVDLTNRKLGLSEFPEDSRFTNVESALVALGCKECLLPADCEKSIDLKPLQDAITNCNVLLTERKKVEFKSRDLVQDLGRIIRGPVEPVRDLVSQFDYALGALGALVSYAELLADDTNYGNYTIEKYSLDRYMRLDSAAVRALNIAEAKTDVNKNFSLFGLMNRTCTVGMGKRLLNRWLKQPLLDVNEINNRLDMVQAFVEDPELRQGLRYQLKRMSDIDRLTHALRKRTANLQPVVKLYQSCIRVSYIKNVLQQYDGSFSALIRTKFLNSLDEWLTEDRFGRFASLVETAIDLDQLENGEYRISPRYSSDLAVLKDELSEVENHINNLHKHTAADLDLTIDKQLKLEKGQLGHVFRISKKDEQKVRKKLTSNYIIIETRKDGVKFTSSKLKKLGDQYQALLGEYTSCQKKVVDDVVRVSASFSEVFENFAAILSELDVLQSFADLATSSPIPYVRPEITASEEGDIILEGSRHPCLEAQDGVNFIPNDCTLVREKSWFQIITGPNMGGKSTFIRQVGVNVLMAQVGSFVPCDRASISVRDCIFARVGAGDCQLRGVSTFMQEMLETASILKGASDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVTRAPTLFATHFHELTALGHKSGDEHQHVPNLGIANYHVGAHIDPSSRKLTMLYKVEPGACDQSFGIHVAEFANFPEAVVALAKSKAEELEDFSTAPNFSDDSKDEVGSKRKRVFSPDDVTRGAARARLLLEELASLPLDEMDGTKAAETVTKLKSDFEKDAADNPWLQQFL*