Gene Details:
- MSU gene ID: LOC_Os05g15880
- RAPdb gene ID: Os05g0247800
- Gene Symbol: OsXIP
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Analysis using an OsXIP-specific antibody revealed that OsXIP is markedly accumulated in apoplast in rice root cells by wounding.
- The transcripts of OsXIP and riceXIP were undetectable under normal conditions, and were drastically induced by wounding and methyl jasmonate (MeJA) treatment in the root.
- These results reinforced the possibility that OsXIP is involved in plant defense mechanisms against phytopathogens.
- Although the OsXIP gene was specifically expressed in mature grains under basal conditions, recombinant OsXIP had no effect on rice endogenous xylanases, and OsXIP-suppressed transgenic rice plants did not exhibit any change in grain development and germination, suggesting that rice development may be independent of OsXIP.
- RNAi-mediated knockdown of the XIP-type endoxylanase inhibitor gene, OsXIP, has no effect on grain development and germination in rice.
Function-related keywords:
Literature:
- Induction of a novel XIP-type xylanase inhibitor by external ascorbic acid treatment and differential expression of XIP-family genes in rice . DOI: 10.1093/pcp/pcm038 ; PMID: 17379695
- RNAi-mediated knockdown of the XIP-type endoxylanase inhibitor gene, OsXIP, has no effect on grain development and germination in rice . DOI: 10.1093/pcp/pcn080 ; PMID: 18511458
- Experimental and in silico studies of competitive inhibition of family GH10 Aspergillus fumigatus xylanase A by Oryza sativa xylanase inhibitor protein . DOI: 10.1016/j.ijbiomac.2021.10.201 ; PMID: 34742846
Related News:
Gene Resources:
- NCBI ID: AK073843
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os05g15880.1
CACACCTCGATCAGTAGCTCCATCGTAAGATCGATTCGACCAACATATCAACAATGGCGCTTCGACGCCTCGCGGCACTTCTCTCCTTGGCAGTACTACTGTCCGCCGGCCTCGCCGCCGTGTCGGCGACGTCCCAGAACACCGGCGACACCGTGATCATCTGGGGCCGGAACAAGGACGAGGGCTCCCTCAGGGAGGCCTGCGACGCCGGCCGCTATACCACCGTCATCATCTCCTTCCTCAGCGCCTTCGGCTACATCCCGGGCACCTACAAGCTCGACATCTCCGGCCACCAGGTCTCCGCCGTCGGCCCCGACATCAAGTACTGCCAGTCCAAGGGTAAACTCATCCTCCTCGCCATCGGCGGCCAGGGCGGCGAGTACTCCCTCCCGTCCTCCCAGGCGGCCGTCGATCTGCACGACCACCTCTGGTACTCCTACCTCGGCGGCCGCCGCAATGGCGTCTACCGCCCGTTCGGCGACGCCAACGTGAACGGCATCGACTTCTTCATCGACCAGGGCGCGAGGGAGCACTACAACGAGCTGGCCAAGATGCTCTACGACCACAACAAGGACTACCGCGCCACGGTCGGCGTGATGGTGACGGCGACGACGCGGTGCGGCTACCCGGACCACCGGCTGGACGAGGCGCTGGCGACGGGGCTCTTCCACCGCATCCACGTCAAGATGTTCAGCGACGGCCGGTGCCCGGCATGGTCCAGGAGGCAGTCGTTCGAGAAGTGGGCAAAGACGTACCCGCAGAGCCGTGTCCTGATCGGCGTCGTGGCCTCGCCGGACGTGGACAAGGACGCCTACATGCCGCCGGAGGCCCTCAACAACCTGCTGCAGTTCATCAACAAGCAGCCCAACTTCGGAGGCGTCATGGTTTGGGACAGGTTCTACGACAAGAAGACCGGCTTCACGGCTCACCTGTGAGTGTGTGACTGGTCGTGACATTTGAAGACCATTAATTCCTTAATATTGGATCAATAAAAGCTTTGTGTGCAGTACTTGTGTACTACACAAATAAAGTCATGTAATGAAAATAAACATATATTGTGTCTGCTATAAAGATTTGTATGTTGGGTAATGTATGTAATCAATAAATAAAGCGAGGTACGGTACCTCGGGTGAAATAATAAAGAGCTTTGAGATAAATAAAACT
CDS Sequence
- >LOC_Os05g15880.1
ATGGCGCTTCGACGCCTCGCGGCACTTCTCTCCTTGGCAGTACTACTGTCCGCCGGCCTCGCCGCCGTGTCGGCGACGTCCCAGAACACCGGCGACACCGTGATCATCTGGGGCCGGAACAAGGACGAGGGCTCCCTCAGGGAGGCCTGCGACGCCGGCCGCTATACCACCGTCATCATCTCCTTCCTCAGCGCCTTCGGCTACATCCCGGGCACCTACAAGCTCGACATCTCCGGCCACCAGGTCTCCGCCGTCGGCCCCGACATCAAGTACTGCCAGTCCAAGGGTAAACTCATCCTCCTCGCCATCGGCGGCCAGGGCGGCGAGTACTCCCTCCCGTCCTCCCAGGCGGCCGTCGATCTGCACGACCACCTCTGGTACTCCTACCTCGGCGGCCGCCGCAATGGCGTCTACCGCCCGTTCGGCGACGCCAACGTGAACGGCATCGACTTCTTCATCGACCAGGGCGCGAGGGAGCACTACAACGAGCTGGCCAAGATGCTCTACGACCACAACAAGGACTACCGCGCCACGGTCGGCGTGATGGTGACGGCGACGACGCGGTGCGGCTACCCGGACCACCGGCTGGACGAGGCGCTGGCGACGGGGCTCTTCCACCGCATCCACGTCAAGATGTTCAGCGACGGCCGGTGCCCGGCATGGTCCAGGAGGCAGTCGTTCGAGAAGTGGGCAAAGACGTACCCGCAGAGCCGTGTCCTGATCGGCGTCGTGGCCTCGCCGGACGTGGACAAGGACGCCTACATGCCGCCGGAGGCCCTCAACAACCTGCTGCAGTTCATCAACAAGCAGCCCAACTTCGGAGGCGTCATGGTTTGGGACAGGTTCTACGACAAGAAGACCGGCTTCACGGCTCACCTGTGA
Protein Sequence
- >LOC_Os05g15880.1
MALRRLAALLSLAVLLSAGLAAVSATSQNTGDTVIIWGRNKDEGSLREACDAGRYTTVIISFLSAFGYIPGTYKLDISGHQVSAVGPDIKYCQSKGKLILLAIGGQGGEYSLPSSQAAVDLHDHLWYSYLGGRRNGVYRPFGDANVNGIDFFIDQGAREHYNELAKMLYDHNKDYRATVGVMVTATTRCGYPDHRLDEALATGLFHRIHVKMFSDGRCPAWSRRQSFEKWAKTYPQSRVLIGVVASPDVDKDAYMPPEALNNLLQFINKQPNFGGVMVWDRFYDKKTGFTAHL*