Gene Details:
- MSU gene ID: LOC_Os05g07790
- RAPdb gene ID: Os05g0170000
- Gene Symbol: BC10 FC116
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Monosaccharide analysis of total and fractioned wall residues revealed that BC10 showed impaired cellulose biosynthesis.
- BC10 is mainly expressed in the developing sclerenchyma and vascular bundle cells, and its deficiency causes a reduction in the levels of cellulose and AGPs, leading to inferior mechanical properties.
- We report here the isolation and in-depth characterization of a brittle rice mutant, brittle culm 10 (BC10).
- BC10 plants show pleiotropic phenotypes, including brittleness of the plant body and retarded growth.
Function-related keywords:
- cellulose , vascular-bundle , culm , growth
Literature:
- BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.) . DOI: 10.1111/j.1365-313X.2008.03703.x ; PMID: 18939965
- A Novel FC116/ BC10 Mutation Distinctively Causes Alteration in the Expression of the Genes for Cell Wall Polymer Synthesis in Rice . DOI: 10.3389/fpls.2016.01366 ; PMID: 27708650
Related News:
Gene Resources:
- NCBI ID: EF140884
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os05g07790.1
AAGTCCAACAACTTAACTTTCACTTCACTTGCCTTGCCTCTGCCGCGCTTGCTCGGCACGGCAACCCACGCGAAATCGGAGATTCCTTCGATTCACGAGATCACCACGAGTCCACCACCCTCCTCCTCTCGCTGGATTCGATGGGCGCTCGGTGAGATCCGAATCCCCCACGGTGGTCGCCGGAGATGAAGCCGCCGCGGAGGTGGATGTACGGGCGGGGCGGCGGGAAGGGGAAGCCGGCGGGGCTGCTGCTGCTGGGGGTGTTCCTCTGCTTGTCGGTGGTGCTGCTGCTGCTGCTGCACGGCTCGTCCCCGTCGCTGGAGGGCGAGGGGAGGAAGCCTGAGGCGGTGGAGGCGGCGGGGGGAGGGGGAGAGGAGGAGGAGGTGGCGGTGGCGCGGGCGGAGGTGGAGGAGGCGCCGCTGCCGCCGGGGAACGCGCGGCTCGCCTTCCTCTTCATCGCCCGCAACCGCCTCCCGCTCGACCTCGTCTGGGACGCCTTCTTCCGCGGTGACAAGGAAGGGAGATTCTCCATCTTCGTGCACTCGCGGCCGGGGTTCGTGCTCACCCGCGCCACCACCCGATCCGGCTTCTTCTACAATCGGCAGGTCAACAACAGCGTCCAGGTGGATTGGGGGGAGGCGAGCATGATCGAGGCTGAGCGTGTTCTACTCGCCCACGCGCTCAAGGACCCCTTAAACGAGCGCTTCGTGTTCGTCTCCGACAGCTGTGTGCCATTGTACAACTTCAACTACACTTACGACTACATAATGTCTTCGTCAACCAGTTTTGTTGACAGTTTTGCTGATACAAAAGCGGGTCGGTATAATCCCAGAATGGACCCAATTATCCCAGTGGAAAATTGGAGAAAAGGCTCGCAGTGGGCTGTGTTAACAAGAAAACATGCTGAAGTTGTGGTTGAAGATGAAGAGGTTTTGCCAGAATTCCAGAAGCATTGCAGGAGAAGGCCCTTACCAGAGTTCTGGCGGGACTGGGATCGTCCTATTCCTGCGGAGGCATGGAAGGCACATAACTGCATACCAGATGAGCACTATGTTCAAACATTGCTTGCACAACATGGTCTTGAAGAAGAGCTTACACGGAGGTCAGTTACACACAGTGCGTGGGATCTATCATCTTCTAAAGATCGTGAAAGGCGTGGATGGCATCCTGTAACATACAAAATCTCAGATGCTACTCCTGCACTTGTAAAATCCATAAAGGATATTGATAATATATATTATGAGACTGAAAATAGAAAGGAGTGGTGTACAAGTAATGGAAAACCAGCACCTTGCTTCCTTTTTGCAAGGAAGTTTACACGAGCAGCTGGTCTGAAGCTTCTTGATTTATCTTTGATAGCAGCAAATGGCGCATCTACCATGTAAAGTTTCTCCGTCAAAAGCAGAATACTGCCAGCTTGCACATACGTAAAGGAAAGTGGTGGAGGGGACAGAAGATAACAGCGAATTTTTTTTGGGCATCTTCATTACAATTTGTTGCACTCTGAAAAGGGACATAGGTGTTCTAAAGCAATAAAGTTTGTTTCTTTTAGCACCTAGGTTAGTACATATGTTAACCCACTACTTAGCATTATAACTGTAACTGTAAGCAACCACCTGCAGTTGGATTGGCAAGAATCACCTCAGTTCTTTTCACGACAAATTCCTTTTTCAAATTTATAGAGAATTGGCATGTCTTATACTTGCATGCATACTGTAGTCATTCCATCGAAGGCAATGCGTGATCTGGTTACCCAAACATTAATCAAGCATGTTGAACTCAGGAACTGCGTATTTCACATGGATTTATACTCTCATAGCAGATCTGCCGATCAACATGCATGTTTGGCATTCTGTTCCATCAGAAACATGGGACCCTAGTGCCGTGGCAATGGTTATCCCCTACCCTTAGGACCTTTGGACTTTTGATGGCCTCAATTTAAAACTGTGCTGGCTGGAGATGCAGCGATGGTGTAGCCAATTCAATGATTCTCATCATTGTTGTTCCTCCAATTGATGTGTTACTTCTTGTACTC
CDS Sequence
- >LOC_Os05g07790.1
ATGAAGCCGCCGCGGAGGTGGATGTACGGGCGGGGCGGCGGGAAGGGGAAGCCGGCGGGGCTGCTGCTGCTGGGGGTGTTCCTCTGCTTGTCGGTGGTGCTGCTGCTGCTGCTGCACGGCTCGTCCCCGTCGCTGGAGGGCGAGGGGAGGAAGCCTGAGGCGGTGGAGGCGGCGGGGGGAGGGGGAGAGGAGGAGGAGGTGGCGGTGGCGCGGGCGGAGGTGGAGGAGGCGCCGCTGCCGCCGGGGAACGCGCGGCTCGCCTTCCTCTTCATCGCCCGCAACCGCCTCCCGCTCGACCTCGTCTGGGACGCCTTCTTCCGCGGTGACAAGGAAGGGAGATTCTCCATCTTCGTGCACTCGCGGCCGGGGTTCGTGCTCACCCGCGCCACCACCCGATCCGGCTTCTTCTACAATCGGCAGGTCAACAACAGCGTCCAGGTGGATTGGGGGGAGGCGAGCATGATCGAGGCTGAGCGTGTTCTACTCGCCCACGCGCTCAAGGACCCCTTAAACGAGCGCTTCGTGTTCGTCTCCGACAGCTGTGTGCCATTGTACAACTTCAACTACACTTACGACTACATAATGTCTTCGTCAACCAGTTTTGTTGACAGTTTTGCTGATACAAAAGCGGGTCGGTATAATCCCAGAATGGACCCAATTATCCCAGTGGAAAATTGGAGAAAAGGCTCGCAGTGGGCTGTGTTAACAAGAAAACATGCTGAAGTTGTGGTTGAAGATGAAGAGGTTTTGCCAGAATTCCAGAAGCATTGCAGGAGAAGGCCCTTACCAGAGTTCTGGCGGGACTGGGATCGTCCTATTCCTGCGGAGGCATGGAAGGCACATAACTGCATACCAGATGAGCACTATGTTCAAACATTGCTTGCACAACATGGTCTTGAAGAAGAGCTTACACGGAGGTCAGTTACACACAGTGCGTGGGATCTATCATCTTCTAAAGATCGTGAAAGGCGTGGATGGCATCCTGTAACATACAAAATCTCAGATGCTACTCCTGCACTTGTAAAATCCATAAAGGATATTGATAATATATATTATGAGACTGAAAATAGAAAGGAGTGGTGTACAAGTAATGGAAAACCAGCACCTTGCTTCCTTTTTGCAAGGAAGTTTACACGAGCAGCTGGTCTGAAGCTTCTTGATTTATCTTTGATAGCAGCAAATGGCGCATCTACCATGTAA
Protein Sequence
- >LOC_Os05g07790.1
MKPPRRWMYGRGGGKGKPAGLLLLGVFLCLSVVLLLLLHGSSPSLEGEGRKPEAVEAAGGGGEEEEVAVARAEVEEAPLPPGNARLAFLFIARNRLPLDLVWDAFFRGDKEGRFSIFVHSRPGFVLTRATTRSGFFYNRQVNNSVQVDWGEASMIEAERVLLAHALKDPLNERFVFVSDSCVPLYNFNYTYDYIMSSSTSFVDSFADTKAGRYNPRMDPIIPVENWRKGSQWAVLTRKHAEVVVEDEEVLPEFQKHCRRRPLPEFWRDWDRPIPAEAWKAHNCIPDEHYVQTLLAQHGLEEELTRRSVTHSAWDLSSSKDRERRGWHPVTYKISDATPALVKSIKDIDNIYYETENRKEWCTSNGKPAPCFLFARKFTRAAGLKLLDLSLIAANGASTM*