Information report for BC10;FC116
Gene Details
|
|
Functional Descriptions
- Monosaccharide analysis of total and fractioned wall residues revealed that BC10 showed impaired cellulose biosynthesis.
- BC10 is mainly expressed in the developing sclerenchyma and vascular bundle cells, and its deficiency causes a reduction in the levels of cellulose and AGPs, leading to inferior mechanical properties.
- We report here the isolation and in-depth characterization of a brittle rice mutant, brittle culm 10 (BC10).
- BC10 plants show pleiotropic phenotypes, including brittleness of the plant body and retarded growth.
Functional Keywords
- cellulose , vascular-bundle , culm , growth
Literature and News
- BC10, a DUF266-containing and Golgi-located type II membrane protein, is required for cell-wall biosynthesis in rice (Oryza sativa L.) . DOI: 10.1111/j.1365-313X.2008.03703.x ; PMID: 18939965
- A Novel FC116/ BC10 Mutation Distinctively Causes Alteration in the Expression of the Genes for Cell Wall Polymer Synthesis in Rice . DOI: 10.3389/fpls.2016.01366 ; PMID: 27708650
Gene Resources
- UniProt: Q65XS5
- EMBL: AC087553, AK100216, AK103412
- AlphaFoldDB: Q65XS5
- EnsemblPlants: Os05t0170000-01, Os05t0170000-02
- Gramene: Os05t0170000-01, Os05t0170000-02
- KEGG: dosa:Os05g0170000, osa:4337935
- Orthologous matrix: KYCKKKP
- InterPro: IPR003406, IPR044174
- PANTHER: PTHR31042, PTHR31042:SF2
- OrthoDB: Q65XS5
- eggNOG: ENOG502QS7F
Sequences
cDNA Sequence
- >LOC_Os05g07790.1
AAGTCCAACAACTTAACTTTCACTTCACTTGCCTTGCCTCTGCCGCGCTTGCTCGGCACGGCAACCCACGCGAAATCGGAGATTCCTTCGATTCACGAGATCACCACGAGTCCACCACCCTCCTCCTCTCGCTGGATTCGATGGGCGCTCGGTGAGATCCGAATCCCCCACGGTGGTCGCCGGAGATGAAGCCGCCGCGGAGGTGGATGTACGGGCGGGGCGGCGGGAAGGGGAAGCCGGCGGGGCTGCTGCTGCTGGGGGTGTTCCTCTGCTTGTCGGTGGTGCTGCTGCTGCTGCTGCACGGCTCGTCCCCGTCGCTGGAGGGCGAGGGGAGGAAGCCTGAGGCGGTGGAGGCGGCGGGGGGAGGGGGAGAGGAGGAGGAGGTGGCGGTGGCGCGGGCGGAGGTGGAGGAGGCGCCGCTGCCGCCGGGGAACGCGCGGCTCGCCTTCCTCTTCATCGCCCGCAACCGCCTCCCGCTCGACCTCGTCTGGGACGCCTTCTTCCGCGGTGACAAGGAAGGGAGATTCTCCATCTTCGTGCACTCGCGGCCGGGGTTCGTGCTCACCCGCGCCACCACCCGATCCGGCTTCTTCTACAATCGGCAGGTCAACAACAGCGTCCAGGTGGATTGGGGGGAGGCGAGCATGATCGAGGCTGAGCGTGTTCTACTCGCCCACGCGCTCAAGGACCCCTTAAACGAGCGCTTCGTGTTCGTCTCCGACAGCTGTGTGCCATTGTACAACTTCAACTACACTTACGACTACATAATGTCTTCGTCAACCAGTTTTGTTGACAGTTTTGCTGATACAAAAGCGGGTCGGTATAATCCCAGAATGGACCCAATTATCCCAGTGGAAAATTGGAGAAAAGGCTCGCAGTGGGCTGTGTTAACAAGAAAACATGCTGAAGTTGTGGTTGAAGATGAAGAGGTTTTGCCAGAATTCCAGAAGCATTGCAGGAGAAGGCCCTTACCAGAGTTCTGGCGGGACTGGGATCGTCCTATTCCTGCGGAGGCATGGAAGGCACATAACTGCATACCAGATGAGCACTATGTTCAAACATTGCTTGCACAACATGGTCTTGAAGAAGAGCTTACACGGAGGTCAGTTACACACAGTGCGTGGGATCTATCATCTTCTAAAGATCGTGAAAGGCGTGGATGGCATCCTGTAACATACAAAATCTCAGATGCTACTCCTGCACTTGTAAAATCCATAAAGGATATTGATAATATATATTATGAGACTGAAAATAGAAAGGAGTGGTGTACAAGTAATGGAAAACCAGCACCTTGCTTCCTTTTTGCAAGGAAGTTTACACGAGCAGCTGGTCTGAAGCTTCTTGATTTATCTTTGATAGCAGCAAATGGCGCATCTACCATGTAAAGTTTCTCCGTCAAAAGCAGAATACTGCCAGCTTGCACATACGTAAAGGAAAGTGGTGGAGGGGACAGAAGATAACAGCGAATTTTTTTTGGGCATCTTCATTACAATTTGTTGCACTCTGAAAAGGGACATAGGTGTTCTAAAGCAATAAAGTTTGTTTCTTTTAGCACCTAGGTTAGTACATATGTTAACCCACTACTTAGCATTATAACTGTAACTGTAAGCAACCACCTGCAGTTGGATTGGCAAGAATCACCTCAGTTCTTTTCACGACAAATTCCTTTTTCAAATTTATAGAGAATTGGCATGTCTTATACTTGCATGCATACTGTAGTCATTCCATCGAAGGCAATGCGTGATCTGGTTACCCAAACATTAATCAAGCATGTTGAACTCAGGAACTGCGTATTTCACATGGATTTATACTCTCATAGCAGATCTGCCGATCAACATGCATGTTTGGCATTCTGTTCCATCAGAAACATGGGACCCTAGTGCCGTGGCAATGGTTATCCCCTACCCTTAGGACCTTTGGACTTTTGATGGCCTCAATTTAAAACTGTGCTGGCTGGAGATGCAGCGATGGTGTAGCCAATTCAATGATTCTCATCATTGTTGTTCCTCCAATTGATGTGTTACTTCTTGTACTC
CDS Sequence
- >LOC_Os05g07790.1
ATGAAGCCGCCGCGGAGGTGGATGTACGGGCGGGGCGGCGGGAAGGGGAAGCCGGCGGGGCTGCTGCTGCTGGGGGTGTTCCTCTGCTTGTCGGTGGTGCTGCTGCTGCTGCTGCACGGCTCGTCCCCGTCGCTGGAGGGCGAGGGGAGGAAGCCTGAGGCGGTGGAGGCGGCGGGGGGAGGGGGAGAGGAGGAGGAGGTGGCGGTGGCGCGGGCGGAGGTGGAGGAGGCGCCGCTGCCGCCGGGGAACGCGCGGCTCGCCTTCCTCTTCATCGCCCGCAACCGCCTCCCGCTCGACCTCGTCTGGGACGCCTTCTTCCGCGGTGACAAGGAAGGGAGATTCTCCATCTTCGTGCACTCGCGGCCGGGGTTCGTGCTCACCCGCGCCACCACCCGATCCGGCTTCTTCTACAATCGGCAGGTCAACAACAGCGTCCAGGTGGATTGGGGGGAGGCGAGCATGATCGAGGCTGAGCGTGTTCTACTCGCCCACGCGCTCAAGGACCCCTTAAACGAGCGCTTCGTGTTCGTCTCCGACAGCTGTGTGCCATTGTACAACTTCAACTACACTTACGACTACATAATGTCTTCGTCAACCAGTTTTGTTGACAGTTTTGCTGATACAAAAGCGGGTCGGTATAATCCCAGAATGGACCCAATTATCCCAGTGGAAAATTGGAGAAAAGGCTCGCAGTGGGCTGTGTTAACAAGAAAACATGCTGAAGTTGTGGTTGAAGATGAAGAGGTTTTGCCAGAATTCCAGAAGCATTGCAGGAGAAGGCCCTTACCAGAGTTCTGGCGGGACTGGGATCGTCCTATTCCTGCGGAGGCATGGAAGGCACATAACTGCATACCAGATGAGCACTATGTTCAAACATTGCTTGCACAACATGGTCTTGAAGAAGAGCTTACACGGAGGTCAGTTACACACAGTGCGTGGGATCTATCATCTTCTAAAGATCGTGAAAGGCGTGGATGGCATCCTGTAACATACAAAATCTCAGATGCTACTCCTGCACTTGTAAAATCCATAAAGGATATTGATAATATATATTATGAGACTGAAAATAGAAAGGAGTGGTGTACAAGTAATGGAAAACCAGCACCTTGCTTCCTTTTTGCAAGGAAGTTTACACGAGCAGCTGGTCTGAAGCTTCTTGATTTATCTTTGATAGCAGCAAATGGCGCATCTACCATGTAA
Protein Sequence
- >LOC_Os05g07790.1
MKPPRRWMYGRGGGKGKPAGLLLLGVFLCLSVVLLLLLHGSSPSLEGEGRKPEAVEAAGGGGEEEEVAVARAEVEEAPLPPGNARLAFLFIARNRLPLDLVWDAFFRGDKEGRFSIFVHSRPGFVLTRATTRSGFFYNRQVNNSVQVDWGEASMIEAERVLLAHALKDPLNERFVFVSDSCVPLYNFNYTYDYIMSSSTSFVDSFADTKAGRYNPRMDPIIPVENWRKGSQWAVLTRKHAEVVVEDEEVLPEFQKHCRRRPLPEFWRDWDRPIPAEAWKAHNCIPDEHYVQTLLAQHGLEEELTRRSVTHSAWDLSSSKDRERRGWHPVTYKISDATPALVKSIKDIDNIYYETENRKEWCTSNGKPAPCFLFARKFTRAAGLKLLDLSLIAANGASTM*