Gene Details:

Functional Descriptions:

  • Our results suggest that OsFBK12 is involved in the 26S proteasome pathway by interacting with Oryza sativa S-PHASE KINASE-ASSOCIATED PROTEIN1-LIKE PROTEIN and that it targets the substrate OsSAMS1 for degradation, triggering changes in ethylene levels for the regulation of leaf senescence and grain size.
  • Phenotypically, overexpression of OsFBK12 led to a delay in leaf senescence and germination and increased seed size, whereas knockdown lines of either OsFBK12 or OsSAMS1 promoted the senescence program.
  • The F-box protein OsFBK12 targets OsSAMS1 for degradation and affects pleiotropic phenotypes, including leaf senescence, in rice.
  • Here, we demonstrate that OsSAMS1, 2 and 3 are essential for histone H3K4me3 and DNA methylation to regulate gene expression related to flowering in Oryza sativa.
  • RNA interference (RNAi) transgenic rice with downregulated transcripts of OsSAMS1, 2 and 3 showed pleiotropic phenotypes, including dwarfism, reduced fertility, delayed germination, as well as late flowering.
  • Knockdown of OsSAMS1, 2 and 3 led to distinguished late flowering and greatly reduced the expression of the flowering key genes, Early heading date 1 (Ehd1), Hd3a and RFT1 (rice FT-like genes).
  • OsFBK12-RNA interference lines and OsSAMS1 overexpression lines showed increased ethylene levels, while OsFBK12-OX lines and OsSAMS1-RNA interference plants exhibited decreased ethylene.
  • RDV-encoded Pns11 protein specifically interacted with OsSAMS1 to enhance its enzymatic activity, leading to higher ethylene levels in both RDV-infected and Pns11-overexpressing rice.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os05g04510.1
    ATCTCGCCGTGCCCGGTCGGATCTAATTAATTTACCTCCTCCACCTCCTCCTCCTCCCCCCGATCGGATCGGCCCGGCTCCTCCTCCTCCGCCGCCGCCACCGCCGCCGCAGATAGGAGAAGATGGCCGCACTTGATACCTTCCTCTTTACCTCGGAGTCTGTGAACGAGGGCCACCCTGACAAGCTCTGCGACCAAGTCTCAGATGCTGTGCTTGATGCCTGCCTCGCCGAGGACCCTGACAGCAAGGTCGCTTGTGAGACCTGCACCAAGACAAACATGGTCATGGTCTTTGGTGAGATCACCACCAAGGCTAACGTTGACTATGAGAAGATTGTCAGGGAGACATGCCGTAACATCGGTTTTGTGTCAGCTGATGTCGGTCTCGATGCTGACCACTGCAAGGTGCTTGTGAACATCGAGCAGCAGTCCCCTGACATTGCACAGGGTGTGCACGGCCACTTCACCAAGCGCCCTGAGGAGATTGGTGCTGGTGACCAGGGACACATGTTTGGATATGCAACTGATGAGACCCCTGAGTTGATGCCCCTCAGCCATGTCCTTGCTACCAAGCTTGGCGCTCGTCTTACGGAGGTTCGCAAGAATGGGACCTGCGCATGGCTCAGGCCTGACGGGAAGACCCAAGTGACTGTTGAGTACCGCAATGAGAGCGGTGCCAGGGTCCCTGTCCGTGTCCACACCGTCCTCATCTCTACCCAGCATGATGAGACAGTCACCAACGATGAGATTGCTGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATTCCCGAGCAGTACCTTGATGAGAAGACAATCTTCCATCTTAACCCATCTGGTCGCTTCGTCATTGGCGGACCTCATGGTGATGCTGGTCTCACTGGCCGGAAGATCATCATTGACACTTATGGTGGCTGGGGAGCTCACGGTGGTGGTGCCTTCTCTGGCAAGGACCCAACCAAGGTTGACCGCAGTGGAGCATACGTCGCAAGGCAAGCTGCCAAGAGCATTGTTGCTAGTGGCCTTGCTCGCCGCTGCATTGTCCAAGTATCATACGCCATCGGTGTCCCAGAGCCACTGTCCGTATTCGTCGACACATACGGCACTGGCAGGATCCCTGACAAGGAGATCCTCAAGATTGTGAAGGAGAACTTCGACTTCAGGCCTGGCATGATCATCATCAACCTTGACCTCAAGAAAGGCGGCAACGGACGCTACCTCAAGACGGCGGCTTACGGTCACTTCGGAAGGGACGACCCAGACTTCACCTGGGAGGTGGTGAAGCCCCTCAAGTGGGAGAAGCCTTCTGCCTAAAAGCTCCCTTTCGGAGGCTTTTGCTCTGTCCCATTATGGTGTTTTGTTTCCTCGCTGCTCAGCATTGTGATTCTTAACCTGCCCCCCGCTGCCATTTATGCCCATGCACGCTACTTTCCTAATAATAAGTACTTATAAGGGTATTGTGTTTGAATATTTTACCTAGAGGAGGAGGAGGATTTGTTATCTGTTATTGCTTAAGCTTATGTAATGGTGAAAGAAGGAAAGATGCTACACTACTTTGAGAAGAAGAAATGAAACCTCCTATGTTTTGGTTATTCTATCCCTATATGGTTCCCTGGTGATCTGTGAGTGCTCAGTTCATGTGTTTGCTGAAGCTGGAAGTGACCTTTGTGCCTTTTGAAGTTGAGCATGCAACATGTTTGTTGGTCCATGATGATACCACGCCCTTTAGGACTCTTGCTTTTGCTATTCCAACTGAGACTTGTTGATTGATGCTGTACACATGTTGAATGTTAGAAGTCTGATGGTGGTTGGTGATCAAACTAAATAAGGAGGGTTTAGATGTCACTAGCAGCTCAGAGTGCATCCAAGGTAAGCTGTCGATTTCACTGACAGCTCAGAATGCATCCCATAAAATCGGTTGTCCAAGTCGCTGGCAATCCAACTTGTCATGCTACTAGCTTGGAGTTTAAAGAAGATGCTTTTGGTT
  • >LOC_Os05g04510.2
    ATCTCGCCGTGCCCGGTCGGATCTAATTAATTTACCTCCTCCACCTCCTCCTCCTCCCCCCGATCGGATCGGCCCGGCTCCTCCTCCTCCGCCGCCGCCACCGCCGCCGCAGATAGGAGAAGATGGCCGCACTTGATACCTTCCTCTTTACCTCGGAGTCTGTGAACGAGGGCCACCCTGACAAGCTCTGCGACCAAGTCTCAGATGCTGTGCTTGATGCCTGCCTCGCCGAGGACCCTGACAGCAAGGTCGCTTGTGAGACCTGCACCAAGACAAACATGGTCATGGTCTTTGGTGAGATCACCACCAAGGCTAACGTTGACTATGAGAAGATTGTCAGGGAGACATGCCGTAACATCGGTTTTGTGTCAGCTGATGTCGGTCTCGATGCTGACCACTGCAAGGTGCTTGTGAACATCGAGCAGCAGTCCCCTGACATTGCACAGGGTGTGCACGGCCACTTCACCAAGCGCCCTGAGGAGATTGGTGCTGGTGACCAGGGACACATGTTTGGATATGCAACTGATGAGACCCCTGAGTTGATGCCCCTCAGCCATGTCCTTGCTACCAAGCTTGGCGCTCGTCTTACGGAGGTTCGCAAGAATGGGACCTGCGCATGGCTCAGGCCTGACGGGAAGACCCAAGTGACTGTTGAGTACCGCAATGAGAGCGGTGCCAGGGTCCCTGTCCGTGTCCACACCGTCCTCATCTCTACCCAGCATGATGAGACAGTCACCAACGATGAGATTGCTGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATTCCCGAGCAGTACCTTGATGAGAAGACAATCTTCCATCTTAACCCATCTGGTCGCTTCGTCATTGGCGGACCTCATGGTGATGCTGGTCTCACTGGCCGGAAGATCATCATTGACACTTATGGTGGCTGGGGAGCTCACGGTGGTGGTGCCTTCTCTGGCAAGGACCCAACCAAGGTTGACCGCAGTGGAGCATACGTCGCAAGGCAAGCTGCCAAGAGCATTGTTGCTAGTGGCCTTGCTCGCCGCTGCATTGTCCAAGTATCATACGCCATCGGTGTCCCAGAGCCACTGTCCGTATTCGTCGACACATACGGCACTGGCAGGATCCCTGACAAGGAGATCCTCAAGATTGTGAAGGAGAACTTCGACTTCAGGCCTGGCATGATCATCATCAACCTTGACCTCAAGAAAGGCGGCAACGGACGCTACCTCAAGACGGCGGCTTACGGTCACTTCGGAAGGGACGACCCAGACTTCACCTGGGAGGTGGTGAAGCCCCTCAAGTGGGAGAAGCCTTCTGCCTAAAAGCTCCCTTTCGGAGGCTTTTGCTCTGTCCCATTATGGTGTTTTGTTTCCTCGCTGCTCAGCATTGTGATTCTTAACCTGCCCCCCGCTGCCATTTATGCCCATGCACGCTACTTTCCTAATAATAAGTACTTATAAGGGTATTGTGTTTGAATATTTTACCTAGAGGAGGAGGAGGATTTGTTATCTGTTATTGCTTAAGCTTATGTAATGGTGAAAGAAGGAAAGATGCTACACTACTTTGAGAAGAAGAAATGAAACCTCCTATGTTTTGGTTATTCTATCCCTATATGGTTCCCTGGTGATCTGTGAGTGCTCAGTTCATGTGTTTGCTGAAGCTGGAAGTGACCTTTGTGCCTTTTGAAGTTGAGCATGCAACATGTTTGTTGGTCCATGATGATACCACGCCCTTTAGGACTCTTGCTTTTGCTATTCCAACTGAGACTTGTTGATTGATGCTGTACACATGTTGAATGTTAGAAGTCTGATGGTGGTTGGTGATCAAACTAAATAAGGAGGGTTTAGATGTCACTAGCAGCTCAGAGTGCATCCAAGGTAAGCTGTCGATTTCACTGACAGCTCAGAATGCATCCCATAAAATCGGTTGTCCAAGTCGCTGGCAATCCAACTTGTCATGCTACTAGCTTGGAGTTTAAAGAAGATGCTTTTGGTT
CDS Sequence
  • >LOC_Os05g04510.1
    ATGGCCGCACTTGATACCTTCCTCTTTACCTCGGAGTCTGTGAACGAGGGCCACCCTGACAAGCTCTGCGACCAAGTCTCAGATGCTGTGCTTGATGCCTGCCTCGCCGAGGACCCTGACAGCAAGGTCGCTTGTGAGACCTGCACCAAGACAAACATGGTCATGGTCTTTGGTGAGATCACCACCAAGGCTAACGTTGACTATGAGAAGATTGTCAGGGAGACATGCCGTAACATCGGTTTTGTGTCAGCTGATGTCGGTCTCGATGCTGACCACTGCAAGGTGCTTGTGAACATCGAGCAGCAGTCCCCTGACATTGCACAGGGTGTGCACGGCCACTTCACCAAGCGCCCTGAGGAGATTGGTGCTGGTGACCAGGGACACATGTTTGGATATGCAACTGATGAGACCCCTGAGTTGATGCCCCTCAGCCATGTCCTTGCTACCAAGCTTGGCGCTCGTCTTACGGAGGTTCGCAAGAATGGGACCTGCGCATGGCTCAGGCCTGACGGGAAGACCCAAGTGACTGTTGAGTACCGCAATGAGAGCGGTGCCAGGGTCCCTGTCCGTGTCCACACCGTCCTCATCTCTACCCAGCATGATGAGACAGTCACCAACGATGAGATTGCTGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATTCCCGAGCAGTACCTTGATGAGAAGACAATCTTCCATCTTAACCCATCTGGTCGCTTCGTCATTGGCGGACCTCATGGTGATGCTGGTCTCACTGGCCGGAAGATCATCATTGACACTTATGGTGGCTGGGGAGCTCACGGTGGTGGTGCCTTCTCTGGCAAGGACCCAACCAAGGTTGACCGCAGTGGAGCATACGTCGCAAGGCAAGCTGCCAAGAGCATTGTTGCTAGTGGCCTTGCTCGCCGCTGCATTGTCCAAGTATCATACGCCATCGGTGTCCCAGAGCCACTGTCCGTATTCGTCGACACATACGGCACTGGCAGGATCCCTGACAAGGAGATCCTCAAGATTGTGAAGGAGAACTTCGACTTCAGGCCTGGCATGATCATCATCAACCTTGACCTCAAGAAAGGCGGCAACGGACGCTACCTCAAGACGGCGGCTTACGGTCACTTCGGAAGGGACGACCCAGACTTCACCTGGGAGGTGGTGAAGCCCCTCAAGTGGGAGAAGCCTTCTGCCTAA
  • >LOC_Os05g04510.2
    ATGGCCGCACTTGATACCTTCCTCTTTACCTCGGAGTCTGTGAACGAGGGCCACCCTGACAAGCTCTGCGACCAAGTCTCAGATGCTGTGCTTGATGCCTGCCTCGCCGAGGACCCTGACAGCAAGGTCGCTTGTGAGACCTGCACCAAGACAAACATGGTCATGGTCTTTGGTGAGATCACCACCAAGGCTAACGTTGACTATGAGAAGATTGTCAGGGAGACATGCCGTAACATCGGTTTTGTGTCAGCTGATGTCGGTCTCGATGCTGACCACTGCAAGGTGCTTGTGAACATCGAGCAGCAGTCCCCTGACATTGCACAGGGTGTGCACGGCCACTTCACCAAGCGCCCTGAGGAGATTGGTGCTGGTGACCAGGGACACATGTTTGGATATGCAACTGATGAGACCCCTGAGTTGATGCCCCTCAGCCATGTCCTTGCTACCAAGCTTGGCGCTCGTCTTACGGAGGTTCGCAAGAATGGGACCTGCGCATGGCTCAGGCCTGACGGGAAGACCCAAGTGACTGTTGAGTACCGCAATGAGAGCGGTGCCAGGGTCCCTGTCCGTGTCCACACCGTCCTCATCTCTACCCAGCATGATGAGACAGTCACCAACGATGAGATTGCTGCTGACCTGAAGGAGCATGTCATCAAGCCTGTCATTCCCGAGCAGTACCTTGATGAGAAGACAATCTTCCATCTTAACCCATCTGGTCGCTTCGTCATTGGCGGACCTCATGGTGATGCTGGTCTCACTGGCCGGAAGATCATCATTGACACTTATGGTGGCTGGGGAGCTCACGGTGGTGGTGCCTTCTCTGGCAAGGACCCAACCAAGGTTGACCGCAGTGGAGCATACGTCGCAAGGCAAGCTGCCAAGAGCATTGTTGCTAGTGGCCTTGCTCGCCGCTGCATTGTCCAAGTATCATACGCCATCGGTGTCCCAGAGCCACTGTCCGTATTCGTCGACACATACGGCACTGGCAGGATCCCTGACAAGGAGATCCTCAAGATTGTGAAGGAGAACTTCGACTTCAGGCCTGGCATGATCATCATCAACCTTGACCTCAAGAAAGGCGGCAACGGACGCTACCTCAAGACGGCGGCTTACGGTCACTTCGGAAGGGACGACCCAGACTTCACCTGGGAGGTGGTGAAGCCCCTCAAGTGGGAGAAGCCTTCTGCCTAA
Protein Sequence
  • >LOC_Os05g04510.1
    MAALDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWEKPSA*
  • >LOC_Os05g04510.2
    MAALDTFLFTSESVNEGHPDKLCDQVSDAVLDACLAEDPDSKVACETCTKTNMVMVFGEITTKANVDYEKIVRETCRNIGFVSADVGLDADHCKVLVNIEQQSPDIAQGVHGHFTKRPEEIGAGDQGHMFGYATDETPELMPLSHVLATKLGARLTEVRKNGTCAWLRPDGKTQVTVEYRNESGARVPVRVHTVLISTQHDETVTNDEIAADLKEHVIKPVIPEQYLDEKTIFHLNPSGRFVIGGPHGDAGLTGRKIIIDTYGGWGAHGGGAFSGKDPTKVDRSGAYVARQAAKSIVASGLARRCIVQVSYAIGVPEPLSVFVDTYGTGRIPDKEILKIVKENFDFRPGMIIINLDLKKGGNGRYLKTAAYGHFGRDDPDFTWEVVKPLKWEKPSA*