Information report for OsPLC4
Gene Details
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Functional Descriptions
- Two independent knockout mutants, plc4-1 and plc4-2, exhibited decreased seedling growth and survival rate whereas overexpression of OsPLC4 improved survival rate under high salinity and water deficiency, compared with wild-type (WT).
- The results indicate that OsPLC4 modulates the activity of two signaling pathways, PA and Ca2+ , to affect rice seedling response to osmotic stress.
- Knockout of OsPLC4 attenuated salt-induced increase of phosphatidic acid (PA) whereas overexpression of OsPLC4 decreased the level of PI4P and PIP2 under salt treatment.
- In addition, the loss of OsPLC4 compromised the increase of inositol triphosphate (IP3 ) and free cytoplasmic Ca2+ ([Ca2+ ]cyt ) and inhibited the induction of genes involved in Ca2+ sensor and osmotic stress response to salt stress.
Functional Keywords
- growth , seedling , salinity , salt , salt-stress , stress , stress-response
Literature and News
Gene Resources
- UniProt: Q0DL28
- EMBL: AC129720, AP008211
- EnsemblPlants: Os05t0127200-01, Os05t0127200-02
- Gramene: Os05t0127200-01, Os05t0127200-02
- KEGG: dosa:Os05g0127200, osa:4337686
- Orthologous matrix: FSCVRVY
- InterPro: IPR000008, IPR000909, IPR001192
- PANTHER: PTHR10336, PTHR10336:SF154
- SUPFAM: SSF47473, SSF49562, SSF51695
- PROSITE: PS50004, PS50007, PS50008
- Gene3D: 1.10.238.10, 2.60.40.150, 3.20.20.190
- OrthoDB: Q0DL28
- SWISS-MODEL: Q0DL28
- Conserved Domain Database: cd00275
Homologs
- Actinidia chinensis: CEY00_Acc01787
- Daucus carota: DCAR_024021
- Glycine max: Glyma.02G257200, Glyma.14G059200
- Gossypium hirsutum: Gohir.D06G169800
- Juglans regia: Jr12_24380
- Manihot esculenta: MANES_10G012700
- Medicago truncatula: Medtr5g082620
- Musa acuminata: Ma05_g30620
- Nicotiana attenuata: A4A49_15602
- Populus trichocarpa: POPTR_010G188800v3
- Prunus persica: PRUPE_2G250100
- Sesamum indicum: SIN_1012155
- Vitis vinifera: VIT_13s0067g00900
Sequences
cDNA Sequence
- >LOC_Os05g03610.1
ATATTGCCTTTAGCCCTTTATATTGCATATATTGGTCATGCACATTTGGCACTGCCACACCACTTGGGCTAATGCAGCGGTTGTTTTCTTCTACCTCATCATCATTCTTATATATCTAAGTTACCATGTCGATCTGTTCCAAAATATAAGGGATTTTGACGATATATCTGATATATAATTAATAGATTCTCTCGCTATGTGTATATATATAGCTAGGTAGCTGAGCAAGCAGCTGGTCATCACGGATCAAGAAGAAGATTAGCTTAGCTAGCTAAAAAGTAAGTAGCCGTGCGAAGTCGCCGGCGGTGATCAGCCGGCGATGACGACGTACAGGGTGTGCTGCTTCCTGCGGCGGTTCAGGGCGGCGTCGAACGAGCCGTCGGAGGAGCTCGGCGACGTGTTCCAGGCGTACGCCGACGGCGGCGGCGGCGTGATGGGGGAGGAGGCGCTGAGGCGGTTCCTCCGGGAGGTGCAGGGGGAGGCCGCCGGCGGCGGCGACGACGAGCTGGAGGCGACGGCGAGGGAGGTGATGGCCTTCGCGGCGGAGCAGAGGCTGCTCAGGAAGGGCGGCGCCGCTGCCGCCGGCGGCGGGCTCACCGTCGAGGGCTTCCACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGGCACAACTCATACCTGACGGGGAACCAGCTGAGCAGCGGGTGCAGCGAGGTGCCCATCGTGAAGGCCCTCCACGACGGCGTCCGTGTCATCGAGCTCGACCTCTGGCCCAACGCTGCCAAGGACGCCGTCGAGGTCCTCCACGGCAGGACGCTGACATCGCCAGTGGGTCTGATGAAATGCCTTGAGGCCATCAGGGAGTACGCGTTCGTCGCCTCCCCTTACCCCGTCATCCTCACCCTCGAAGATCACCTCACTCCCGACCTCCAATCCAAAGTCGCCAAGATGATCAAGGAGACGTTCGGTGACATGCTCTACGTCTCTGAAACTGAGAACATGGCGGAATTCCCTTCGCCGGACGAGCTCAAGGGGAAGATCATCGTGTCGACGAAGCCGCCCAAGGAGTACCTCCAGACCAAGAACGACGCCGACGCCGACGAGGCCGGCGTCTGGGGCGAGGAGATCACCGACGACAAGGTGGCGGCGACGGCGATGACGACAGAAGAGAAATGCGCGGCGGCGGAGGAAGCAGTCGCCGCCGCCGCCGTCGACGAGGAGATGCAGGAGGCCGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGCGCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCGATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCACCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAAATTGCTGAGGATATTCCCTCGGTCGACGCGCATTACGTCTTCGAATTATAATCCTTTGATGGGTTGGAGGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGCTGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCACCGCGGCGAGCCCCTCCGCTCCGTCAAGCTCCTCATGCGCTTCGACTTCACCTGACTACTCCATCTTCTTCTTCATCATCGTCATCGTCTTAGTAGTAGTAGTTCCATGTATGATATCATGAGGGATGAAGCATTGATCGTACTTTCTCCGTCCCGAAATATAGCAATGTAGGATTAGATGGAAACATCTTAATACTACGAATCTGGATATGTCCTATCTGGTTCTGGTTTGCTATGTTTTAGGACGAATATAGTACATAAAATTTTAGAAGTTTTGTTTTAAAAAAGAATAAATTTTGTGCGAAACGGAAGGTGTGATTGTACATTTTGTACGTACATTGTTTGTTGTTGATTAATAAACGTGTTAATAAAAGAGGGAAGGATTCTTTTAATTTCAA
CDS Sequence
- >LOC_Os05g03610.1
ATGACGACGTACAGGGTGTGCTGCTTCCTGCGGCGGTTCAGGGCGGCGTCGAACGAGCCGTCGGAGGAGCTCGGCGACGTGTTCCAGGCGTACGCCGACGGCGGCGGCGGCGTGATGGGGGAGGAGGCGCTGAGGCGGTTCCTCCGGGAGGTGCAGGGGGAGGCCGCCGGCGGCGGCGACGACGAGCTGGAGGCGACGGCGAGGGAGGTGATGGCCTTCGCGGCGGAGCAGAGGCTGCTCAGGAAGGGCGGCGCCGCTGCCGCCGGCGGCGGGCTCACCGTCGAGGGCTTCCACCGCTGGCTGTGCAGCGACGCCAACGCTGCACTGGATCCTCAGAAACGGGTATATCAAGACATGGGATTGCCTCTGTCACACTACTTCATCTACACGGGGCACAACTCATACCTGACGGGGAACCAGCTGAGCAGCGGGTGCAGCGAGGTGCCCATCGTGAAGGCCCTCCACGACGGCGTCCGTGTCATCGAGCTCGACCTCTGGCCCAACGCTGCCAAGGACGCCGTCGAGGTCCTCCACGGCAGGACGCTGACATCGCCAGTGGGTCTGATGAAATGCCTTGAGGCCATCAGGGAGTACGCGTTCGTCGCCTCCCCTTACCCCGTCATCCTCACCCTCGAAGATCACCTCACTCCCGACCTCCAATCCAAAGTCGCCAAGATGATCAAGGAGACGTTCGGTGACATGCTCTACGTCTCTGAAACTGAGAACATGGCGGAATTCCCTTCGCCGGACGAGCTCAAGGGGAAGATCATCGTGTCGACGAAGCCGCCCAAGGAGTACCTCCAGACCAAGAACGACGCCGACGCCGACGAGGCCGGCGTCTGGGGCGAGGAGATCACCGACGACAAGGTGGCGGCGACGGCGATGACGACAGAAGAGAAATGCGCGGCGGCGGAGGAAGCAGTCGCCGCCGCCGCCGTCGACGAGGAGATGCAGGAGGCCGAGACGGACAAGAAGACGCAGCACGGGGTGGACAACGAGTACAGGCGCCTCATCGCCATCCCTCTGACAAGAAGAAAGCACGACATGGATCAGGACCTCAAGGTCGATCCCGACATGGTGACGCGCCTCAGCCTCGGGGAGAAGGCCTACGAGAAGGCCATTGTCACCCATGGAGCTCACATTATCAGGTTTACGCAGAGGAAATTGCTGAGGATATTCCCTCGGTCGACGCGCATTACGTCTTCGAATTATAATCCTTTGATGGGTTGGAGGTATGGAGTTCAGATGGTTGCAGCAAACATGCAGGGCCATGGAAGAAAGCTGTGGCTGACTCAGGGGATGTTCCGAGCAAACGGCGGTTGCGGTTACGTCAAAAAGCCTGATATTCTGATGAACAACGATCCAGATAAACTGTTTGATCCTACATCCAAACTACCAGTAAAGACAAGACTAAAGGTGACGGTGTACATGGGAGACGGATGGCGATTCGACTTCCGCAAGACACATTTCGACAAATGCTCACCCCCAGACTTCTATGCAAGGGTGGGTATAGCCGGAGTAGAAGCAGACACGAGGATGGAGCAGACGAAGGTGAAGATGGACACGTGGATTCCGGCATGGGATCACGAGTTCGAGTTCCCGTTGAGCGTGCCGGAGCTGGCGCTGCTCCGGGTGGAGGTGCACGAGTCCGACAACCACCAGAAGGACGACTTCGGCGGGCAGACCTGCCTGCCGGTGTGGGAGCTCCGGCGAGGCATCCGCTCCGTCAGGCTCTGCGACCACCGCGGCGAGCCCCTCCGCTCCGTCAAGCTCCTCATGCGCTTCGACTTCACCTGA
Protein Sequence
- >LOC_Os05g03610.1
MTTYRVCCFLRRFRAASNEPSEELGDVFQAYADGGGGVMGEEALRRFLREVQGEAAGGGDDELEATAREVMAFAAEQRLLRKGGAAAAGGGLTVEGFHRWLCSDANAALDPQKRVYQDMGLPLSHYFIYTGHNSYLTGNQLSSGCSEVPIVKALHDGVRVIELDLWPNAAKDAVEVLHGRTLTSPVGLMKCLEAIREYAFVASPYPVILTLEDHLTPDLQSKVAKMIKETFGDMLYVSETENMAEFPSPDELKGKIIVSTKPPKEYLQTKNDADADEAGVWGEEITDDKVAATAMTTEEKCAAAEEAVAAAAVDEEMQEAETDKKTQHGVDNEYRRLIAIPLTRRKHDMDQDLKVDPDMVTRLSLGEKAYEKAIVTHGAHIIRFTQRKLLRIFPRSTRITSSNYNPLMGWRYGVQMVAANMQGHGRKLWLTQGMFRANGGCGYVKKPDILMNNDPDKLFDPTSKLPVKTRLKVTVYMGDGWRFDFRKTHFDKCSPPDFYARVGIAGVEADTRMEQTKVKMDTWIPAWDHEFEFPLSVPELALLRVEVHESDNHQKDDFGGQTCLPVWELRRGIRSVRLCDHRGEPLRSVKLLMRFDFT*