Gene Details:
- MSU gene ID: LOC_Os05g02020
- RAPdb gene ID: Os05g0110900
- Gene Symbol: OsRLCK176 BML
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Here, we demonstrate that the rice LysM receptor-like kinase OsCERK1, a key component of the chitin elicitor signaling pathway, also plays an important role in PGN-triggered immunity in rice.
- BML is a candidate gene associated with leaf senescence, ROS regulation, and disease response, also involved in hormone signaling in rice.
- The BML mutant showed excessive accumulation of reactive oxygen species (ROS), increased activities of superoxide dismutase, catalase, and malondialdehyde, upregulation of senescence-induced STAY-GREEN genes and senescence-related transcription factors, and down regulation of photosynthesis-related genes.
- The BML mutants had brown midribs in their leaves and initiated senescence prematurely, at the onset of heading.
- In pathogen response, BML demonstrated higher resistance against Xanthomonas oryzae pv.
- A map-based cloning using insertion/deletion markers confirmed that BML was located in the 57.
- The levels of abscisic acid (ABA) and jasmonic acid (JA) were increased in BML with the upregulation of some ABA and JA biosynthetic genes.
Function-related keywords:
- peptidoglycan-and-chitin-signaling , chitin-signaling , peptidoglycan-signaling , innate-immunity , leaf , leaf-senescence , transcription-factor , senescence , resistance , map-based-cloning , ABA , disease , jasmonic , jasmonic-acid , ja , JA , pathogen , abscisic-acid , reactive-oxygen-species
Literature:
- OsCERK1 and OsRLCK176 play important roles in peptidoglycan and chitin signaling in rice innate immunity . DOI: 10.1111/tpj.12710 ; PMID: 25335639
- Four receptor-like cytoplasmic kinases regulate development and immunity in rice . DOI: 10.1111/pce.12696 ; PMID: 26679011
- The Brown Midrib Leaf (bml) Mutation in Rice (Oryza sativa L.) Causes Premature Leaf Senescence and the Induction of Defense Responses . DOI: 10.3390/genes9040203 ; PMID: 29642546
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g02020.1
ACAAGCCTGCAAAGGCTTTTTCCTTCTTCCCCAACCACCATTAATGGCTTCCTCCTCCTCTTCATCTTCCTCTCCTCCTTCCTCTTTCTTTCGAGTAGAATTCTAGAAGAAGGAGAAAGAAATCGAAAGGCAGCAGCTGATGGTTGCATGCTGTGCGTCGCTCTCATGCTCAAAAGGTCAACAGAGTTGAGTCCCTCAGCTAAGGCAGGCAAGCACGAGAGTCACAGATACATATCCCCTTTAATCTCCTCTCCCACCAATCCTTTGATCCATTCATCCCAACTTCTTCCATAGTACAAATCTCTTGCTCCCCTCCCTCTCATCTCCTATCTGTATCTATTTCTATCTCTCTATCTCGTATCTCCTTGAAGAAGAACAGAGAGAGGATTGGGAGGAGTAGTAGGTAGTTGATTTAGTTTTGAGGAGCCGGAGAGGAGAGCAGGTGTCCTGGTTCGTGATTCGATTTCAGCTGTTCTGATCGCTTCTTGTGGCTTCTGTGCCGTGCTGGCCTCTCGTTCTTGAGCCTTTGTCGATTCGATTCCCGCGAAAAGGAGGCGTCTTTTTGTGAGTTAGGTGTGGTGCTTCTTGGGCTCTACTACCTCCGAGGTGAAGGTGTTGTTGTTGGTGGTGGTGGATTTTCGCCATGGGGAATTGCTGGGGCGCCAAGATCAGCTCGGAGAGCCCTTGCCGCAGCGCCTCCTCCCCTTCTGGGGGGACATCCAAGTATGCTAGCAACTCCAGTGTGTCTGCAGCCTCGGTGCCGCCAACACCACGGAGCGAGGATGAGATCCTGGAGGCAGCAAATGTCAAGGCCTTTGCCTTCAATGAGCTGAGGACTGCCACCAGAAACTTCCGGCCAGACAGTGTGCTTGGTGAGGGAGGCTTTGGATCAGTCTTCAAAGGGTGGATCGATGAGAAGACGCTCGCACCAACTAAGCCAGGCACAGGGATGGTCATTGCTGTAAAGAAGTTGAATCAGGAAGGCCACCAGGGTCACAGGGAATGGCTGGCTGAAGTGAATTATCTTGGACAGTTGTCACACCCATATCTTGTAAGGCTCGTTGGGTACTGCGTCGAAGATGAGCAGCGTCTTCTTGTTTATGAGTTCATGCCACGTGGTAGCTTGGAAAATCATCTTTTCAGGAGGAGTACGCATTTTCAGCCGCTCTCCTGGAACCTTCGGATGAAAATTGCCCTTGGAGCAGCAAAAGGGCTCGCATTTCTCCACAGTGACAAGGTTAAAGTCATCTACCGTGATTTCAAGACCTCTAATGTCCTTTTGGATGCGAACTATGATGCAAAGCTCTCTGATTTTGGGCTGGCAAAGGATGGACCGACTGGTGACAAGAGCCATGTCTCCACAAGGGTGATGGGGACTTATGGATATGCTGCACCAGAATACCTTGCAACAGGCCATCTGACCACCAAGAGCGACGTCTATAGCTTTGGAGTTGTGCTGCTAGAGATGCTATCAGGACGACGAGCACTGGACAAGAACCGCCCAACCGGGGAGCACAATCTGGTGGAGTGGGCTAGGCCATACCTGATGAGCAAGCGGCGCATCTTCCGCATCCTGGACGCCCGGTTGGGCGGGCAGTACTCCCTTGCCAAGGCCCAGAAGGCTGCAACACTGGCACTTCAATGCATCTCTGTGGAGGCCAAGAACAGGCCTAACATGGAGCAGGTTGTTGCTGTATTAGAACAGCTCCAGGATTCCAAGGAGACAGGGGCAAATCCTCAGCTGCAGAAGAAGTCCAGCAGCAAGAACGCAGGCAGCAATGGATCGAAACCGTCATCGAAGGGGAAGCCCGCAAATGCGAGGCTGGTTTAAGTGAACAATCATATATCATATGATCAGATATAGATCTGTTGAGATGAGTAGTGTAGGCTCTTAGAGGGACCTGTAAAGAAGAGGAGAGTTGTGAATCCTTGGTGCTTGCCTGTTTTAGTTGTTTTTGCAGCTTCTAGTCAGAGTCTTGTCTGAAGTAAAAAGTATGTGGTCGCCTATATCTGCATGCATTCAGTTCAGTGCATTGTGGATTGTACAGTTTATATCTAGTTCTAATGCTGCGAAATTTTTGTTCGAGGCAACAGATGTGCCCAGATCCAGTTTTTCCTGATTTTTAAATCTACAAGCTGCCCCAGATCATATTTTTGAGTTCTAGA - >LOC_Os05g02020.2
ACAAGCCTGCAAAGGCTTTTTCCTTCTTCCCCAACCACCATTAATGGCTTCCTCCTCCTCTTCATCTTCCTCTCCTCCTTCCTCTTTCTTTCGAGTAGAATTCTAGAAGAAGGAGAAAGAAATCGAAAGGCAGCAGCTGATGGTTGCATGCTGTGCGTCGCTCTCATGCTCAAAAGGTCAACAGAGTTGAGTCCCTCAGCTAAGGCAGGCAAGCACGAGAGTCACAGATACATATCCCCTTTAATCTCCTCTCCCACCAATCCTTTGATCCATTCATCCCAACTTCTTCCATAGTACAAATCTCTTGCTCCCCTCCCTCTCATCTCCTATCTGTATCTATTTCTATCTCTCTATCTCGTATCTCCTTGAAGAAGAACAGAGAGAGGATTGGGAGGAGTAGTAGGTAGTTGATTTAGTTTTGAGGAGCCGGAGAGGAGAGCAGGTGTCCTGGTTCGTGATTCGATTTCAGCTGTTCTGATCGCTTCTTGTGGCTTCTGTGCCGTGCTGGCCTCTCGTTCTTGAGCCTTTGTCGATTCGATTCCCGCGAAAAGGAGGCGTCTTTTTGTGAGTTAGGTGTGGTGCTTCTTGGGCTCTACTACCTCCGAGGTGAAGGTGTTGTTGTTGGTGGTGGTGGATTTTCGCCATGGGGAATTGCTGGGGCGCCAAGATCAGCTCGGAGAGCCCTTGCCGCAGCGCCTCCTCCCCTTCTGGGGGGACATCCAAGTATGCTAGCAACTCCAGTGTGTCTGCAGCCTCGGTGCCGCCAACACCACGGAGCGAGGATGAGATCCTGGAGGCAGCAAATGTCAAGGCCTTTGCCTTCAATGAGCTGAGGACTGCCACCAGAAACTTCCGGCCAGACAGTGTGCTTGGTGAGGGAGGCTTTGGATCAGTCTTCAAAGGGTGGATCGATGAGAAGACGCTCGCACCAACTAAGCCAGGCACAGGGATGGTCATTGCTGTAAAGAAGTTGAATCAGGAAGGCCACCAGGGTCACAGGGAATGGCTGGCTGAAGTGAATTATCTTGGACAGTTGTCACACCCATATCTTGTAAGGCTCGTTGGGTACTGCGTCGAAGATGAGCAGCGTCTTCTTGTTTATGAGTTCATGCCACGTGGTAGCTTGGAAAATCATCTTTTCAGGAGGAGTACGCATTTTCAGCCGCTCTCCTGGAACCTTCGGATGAAAATTGCCCTTGGAGCAGCAAAAGGGCTCGCATTTCTCCACAGTGACAAGGTTAAAGTCATCTACCGTGATTTCAAGACCTCTAATGTCCTTTTGGATGCGAACTATGATGCAAAGCTCTCTGATTTTGGGCTGGCAAAGGATGGACCGACTGGTGACAAGAGCCATGTCTCCACAAGGGTGATGGGGACTTATGGATATGCTGCACCAGAATACCTTGCAACAGGCCATCTGACCACCAAGAGCGACGTCTATAGCTTTGGAGTTGTGCTGCTAGAGATGCTATCAGGACGACGAGCACTGGACAAGAACCGCCCAACCGGGGAGCACAATCTGGTGGAGTGGGCTAGGCCATACCTGATGAGCAAGCGGCGCATCTTCCGCATCCTGGACGCCCGGTTGGGCGGGCAGTACTCCCTTGCCAAGGCCCAGAAGGCTGCAACACTGGCACTTCAATGCATCTCTGTGGAGGCCAAGAACAGGCCTAACATGGAGCAGGTTGTTGCTGTATTAGAACAGCTCCAGGATTCCAAGGAGACAGGGGCAAATCCTCAGCTGCAGAAGAAGTCCAGCAGCAAGAACGCAGGCAGCAATGGATCGAAACCGTCATCGAAGGGGAAGCCCGCAAATGCGAGGCTGGTTTAAGTGAACAATCATATATCATATGATCAGATATAGATCTGTTGAGATGAGTAGTGTAGGCTCTTAGAGGGACCTGTAAAGAAGAGGAGAGTTGTGAATCCTTGGTGCTTGCCTGTTTTAGTTGTTTTTGCAGCTTCTAGTCAGAGTCTTGTCTGAAGTAAAAAGTATGTGGTCGCCTATATCTGCATGCATTCAGTTCAGTGCATTGTGGATTGTACAGTTTATATCTAGTTCTAATGCTGCGAAATTTTTGTTCGAGGCAACAGATGTGCCCAGATCCAGTTTTTCCTGATTTTTAAATCTACAAGCTGCCCCAGATCATATTTTTGAGTTCTAGA
CDS Sequence
- >LOC_Os05g02020.1
ATGGGGAATTGCTGGGGCGCCAAGATCAGCTCGGAGAGCCCTTGCCGCAGCGCCTCCTCCCCTTCTGGGGGGACATCCAAGTATGCTAGCAACTCCAGTGTGTCTGCAGCCTCGGTGCCGCCAACACCACGGAGCGAGGATGAGATCCTGGAGGCAGCAAATGTCAAGGCCTTTGCCTTCAATGAGCTGAGGACTGCCACCAGAAACTTCCGGCCAGACAGTGTGCTTGGTGAGGGAGGCTTTGGATCAGTCTTCAAAGGGTGGATCGATGAGAAGACGCTCGCACCAACTAAGCCAGGCACAGGGATGGTCATTGCTGTAAAGAAGTTGAATCAGGAAGGCCACCAGGGTCACAGGGAATGGCTGGCTGAAGTGAATTATCTTGGACAGTTGTCACACCCATATCTTGTAAGGCTCGTTGGGTACTGCGTCGAAGATGAGCAGCGTCTTCTTGTTTATGAGTTCATGCCACGTGGTAGCTTGGAAAATCATCTTTTCAGGAGGAGTACGCATTTTCAGCCGCTCTCCTGGAACCTTCGGATGAAAATTGCCCTTGGAGCAGCAAAAGGGCTCGCATTTCTCCACAGTGACAAGGTTAAAGTCATCTACCGTGATTTCAAGACCTCTAATGTCCTTTTGGATGCGAACTATGATGCAAAGCTCTCTGATTTTGGGCTGGCAAAGGATGGACCGACTGGTGACAAGAGCCATGTCTCCACAAGGGTGATGGGGACTTATGGATATGCTGCACCAGAATACCTTGCAACAGGCCATCTGACCACCAAGAGCGACGTCTATAGCTTTGGAGTTGTGCTGCTAGAGATGCTATCAGGACGACGAGCACTGGACAAGAACCGCCCAACCGGGGAGCACAATCTGGTGGAGTGGGCTAGGCCATACCTGATGAGCAAGCGGCGCATCTTCCGCATCCTGGACGCCCGGTTGGGCGGGCAGTACTCCCTTGCCAAGGCCCAGAAGGCTGCAACACTGGCACTTCAATGCATCTCTGTGGAGGCCAAGAACAGGCCTAACATGGAGCAGGTTGTTGCTGTATTAGAACAGCTCCAGGATTCCAAGGAGACAGGGGCAAATCCTCAGCTGCAGAAGAAGTCCAGCAGCAAGAACGCAGGCAGCAATGGATCGAAACCGTCATCGAAGGGGAAGCCCGCAAATGCGAGGCTGGTTTAA - >LOC_Os05g02020.2
ATGGGGAATTGCTGGGGCGCCAAGATCAGCTCGGAGAGCCCTTGCCGCAGCGCCTCCTCCCCTTCTGGGGGGACATCCAAGTATGCTAGCAACTCCAGTGTGTCTGCAGCCTCGGTGCCGCCAACACCACGGAGCGAGGATGAGATCCTGGAGGCAGCAAATGTCAAGGCCTTTGCCTTCAATGAGCTGAGGACTGCCACCAGAAACTTCCGGCCAGACAGTGTGCTTGGTGAGGGAGGCTTTGGATCAGTCTTCAAAGGGTGGATCGATGAGAAGACGCTCGCACCAACTAAGCCAGGCACAGGGATGGTCATTGCTGTAAAGAAGTTGAATCAGGAAGGCCACCAGGGTCACAGGGAATGGCTGGCTGAAGTGAATTATCTTGGACAGTTGTCACACCCATATCTTGTAAGGCTCGTTGGGTACTGCGTCGAAGATGAGCAGCGTCTTCTTGTTTATGAGTTCATGCCACGTGGTAGCTTGGAAAATCATCTTTTCAGGAGGAGTACGCATTTTCAGCCGCTCTCCTGGAACCTTCGGATGAAAATTGCCCTTGGAGCAGCAAAAGGGCTCGCATTTCTCCACAGTGACAAGGTTAAAGTCATCTACCGTGATTTCAAGACCTCTAATGTCCTTTTGGATGCGAACTATGATGCAAAGCTCTCTGATTTTGGGCTGGCAAAGGATGGACCGACTGGTGACAAGAGCCATGTCTCCACAAGGGTGATGGGGACTTATGGATATGCTGCACCAGAATACCTTGCAACAGGCCATCTGACCACCAAGAGCGACGTCTATAGCTTTGGAGTTGTGCTGCTAGAGATGCTATCAGGACGACGAGCACTGGACAAGAACCGCCCAACCGGGGAGCACAATCTGGTGGAGTGGGCTAGGCCATACCTGATGAGCAAGCGGCGCATCTTCCGCATCCTGGACGCCCGGTTGGGCGGGCAGTACTCCCTTGCCAAGGCCCAGAAGGCTGCAACACTGGCACTTCAATGCATCTCTGTGGAGGCCAAGAACAGGCCTAACATGGAGCAGGTTGTTGCTGTATTAGAACAGCTCCAGGATTCCAAGGAGACAGGGGCAAATCCTCAGCTGCAGAAGAAGTCCAGCAGCAAGAACGCAGGCAGCAATGGATCGAAACCGTCATCGAAGGGGAAGCCCGCAAATGCGAGGCTGGTTTAA
Protein Sequence
- >LOC_Os05g02020.1
MGNCWGAKISSESPCRSASSPSGGTSKYASNSSVSAASVPPTPRSEDEILEAANVKAFAFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQEGHQGHREWLAEVNYLGQLSHPYLVRLVGYCVEDEQRLLVYEFMPRGSLENHLFRRSTHFQPLSWNLRMKIALGAAKGLAFLHSDKVKVIYRDFKTSNVLLDANYDAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTTKSDVYSFGVVLLEMLSGRRALDKNRPTGEHNLVEWARPYLMSKRRIFRILDARLGGQYSLAKAQKAATLALQCISVEAKNRPNMEQVVAVLEQLQDSKETGANPQLQKKSSSKNAGSNGSKPSSKGKPANARLV* - >LOC_Os05g02020.2
MGNCWGAKISSESPCRSASSPSGGTSKYASNSSVSAASVPPTPRSEDEILEAANVKAFAFNELRTATRNFRPDSVLGEGGFGSVFKGWIDEKTLAPTKPGTGMVIAVKKLNQEGHQGHREWLAEVNYLGQLSHPYLVRLVGYCVEDEQRLLVYEFMPRGSLENHLFRRSTHFQPLSWNLRMKIALGAAKGLAFLHSDKVKVIYRDFKTSNVLLDANYDAKLSDFGLAKDGPTGDKSHVSTRVMGTYGYAAPEYLATGHLTTKSDVYSFGVVLLEMLSGRRALDKNRPTGEHNLVEWARPYLMSKRRIFRILDARLGGQYSLAKAQKAATLALQCISVEAKNRPNMEQVVAVLEQLQDSKETGANPQLQKKSSSKNAGSNGSKPSSKGKPANARLV*