Gene Details:
- MSU gene ID: LOC_Os05g01990
- RAPdb gene ID: Os05g0110500
- Gene Symbol: OsRH17
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- OsRH17 was specifically expressed in pollen and differentiated callus and upregulated by application of the plant hormones naphthyl acetic acid (NAA) and abscisic acid (ABA).
- No visible phenotype was observed in transgenic yeast and rice (overexpressing OsRH17, N-427, and C-167, as well as OsRH17 knockdown), and even in some abiotic and biotic stresses, which could be due to the redundancy in rice under normal conditions.
Function-related keywords:
Literature:
- A rice DEAD-box RNA helicase protein, OsRH17, suppresses 16S ribosomal RNA maturation in Escherichia coli . DOI: 10.1016/j.gene.2014.11.025 ; PMID: 25447922
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os05g01990.1
AAAGGTTGGTTGGTCTCTTCTTCTTCCTCCTCCATCCCCTTTGCCCTCCTGCTGCGCCGCCCCAACTCCGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATGAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGGTTGGAAGAACTGCAAGGATTGGTGAAAAGGGGGAGGCTCTCCTGTTTCTCCAACCTATTGAAACCGACTACTTGAGAGATCTAGAGCTACATGGTGCATCACTTACAGAATACCCCCTCCAAAAGGTTTTAGACAGTTTTCCTGTAAATGGACAGAGGCTTCACAAAAGGAAGCAAATATCTTTAGATATGCATCCATGGATAATGTCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCCGAGGACACGACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGCCCACCGAGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGCTAGAAGCTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAGATGAATCTCCATAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACTCCAATTTTGTGGAACTAACAGCCGCAGCTTGAAGGTGAAAACATTGACCCCATGAAGCTTTCATGTTTTGGCCAGAAGCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTATCAAAAGACACAGAATGTTTTGCTCAGTTTGGGATTATCTACTGCTCTGCTAGTTACCCATTTTAATCAGAAATATAATCCATGTGTTTCTTCCTTACGATATTGTTTGCTCAAAATATTATCCATGTAAAAACTGGATTTGTTAGAAAGGCTTATTGGCTGGATGCAATTGAATGATACAGTACAAATGTTCTAACTCGGTAAGCACGTTTTTCAGACAAGCAATGTTCTACCTCATTGAGTTAAAACCATACTATCAAAATTACATTGGGACTCTGAAAGGAAACAACATTACTGCCTTTAACGGTTTTCATAATACAAAGTTTGCTCTAAATGGCCCCCTTAATCTACACTGTTCTGGTGATTCCTTCCTGACCAAACATGGTGCACAAACTTCCATCCATGGGCAACATGTCATCAGAGGAGCTTCTCAAAAGTGAACCAAACTGTATATGAGTGTCCAT - >LOC_Os05g01990.2
AAAGGTTGGTTGGTCTCTTCTTCTTCCTCCTCCATCCCCTTTGCCCTCCTGCTGCGCCGCCCCAACTCCGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATGAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGGTTGGAAGAACTGCAAGGATTGGTGAAAAGGGGGAGGCTCTCCTGTTTCTCCAACCTATTGAAACCGACTACTTGAGAGATCTAGAGCTACATGGTGCATCACTTACAGAATACCCCCTCCAAAAGGTTTTAGACAGTTTTCCTGTAAATGGACAGAGGCTTCACAAAAGGAAGCAAATATCTTTAGATATGCATCCATGGATAATGTCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCCGAGGACACGACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGCCCACCGAGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGCTAGAAGCTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAGATGAATCTCCATAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACTCCAATTTTGTGGAACTAACAGCCGCAGCTTGAAGGTGAAAACATTGACCCCATGAAGCTTTCATGTTTTGGCCAGAAGCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTATCAAAAGACACAGAATGTTTTGCTCAGTTTGGGATTATCTACTGCTCTGCTAGTTACCCATTTTAATCAGAAATATAATCCATGTGTTTCTTCCTTACGATATTGTTTGCTCAAAATATTATCCATGTAAAAACTGGATTTGTTAGAAAGGCTTATTGGCTGGATGCAATTGAATGATACAGTACAAATGTTCTAACTCGGTAAGCACGTTTTTCAGACAAGCAATGTTCTACCTCATTGAGTTAAAACCATACTATCAAAATTACATTGGGACTCTGAAAGGAAACAACATTACTGCCTTTAACGGTTTTCATAATACAAAGTTTGCTCTAAATGGCCCCCTTAATCTACACTGTTCTGGTGATTCCTTCCTGACCAAACATGGTGCACAAACTTCCATCCATGGGCAACATGTCATCAGAGGAGCTTCTCAAAAGTGAACCAAACTGTATATGAGTGTCCAT
CDS Sequence
- >LOC_Os05g01990.1
ATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATGAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGGTTGGAAGAACTGCAAGGATTGGTGAAAAGGGGGAGGCTCTCCTGTTTCTCCAACCTATTGAAACCGACTACTTGAGAGATCTAGAGCTACATGGTGCATCACTTACAGAATACCCCCTCCAAAAGGTTTTAGACAGTTTTCCTGTAAATGGACAGAGGCTTCACAAAAGGAAGCAAATATCTTTAGATATGCATCCATGGATAATGTCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCCGAGGACACGACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGCCCACCGAGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGCTAGAAGCTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAGATGA - >LOC_Os05g01990.2
ATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATGAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGGTTGGAAGAACTGCAAGGATTGGTGAAAAGGGGGAGGCTCTCCTGTTTCTCCAACCTATTGAAACCGACTACTTGAGAGATCTAGAGCTACATGGTGCATCACTTACAGAATACCCCCTCCAAAAGGTTTTAGACAGTTTTCCTGTAAATGGACAGAGGCTTCACAAAAGGAAGCAAATATCTTTAGATATGCATCCATGGATAATGTCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCCGAGGACACGACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGCCCACCGAGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGCTAGAAGCTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAGATGA
Protein Sequence
- >LOC_Os05g01990.1
MAKKLGKSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQRLHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLLGRSHQVQLKKRKKEQKRERPAKRRKIPAKR* - >LOC_Os05g01990.2
MAKKLGKSPVAKEEDKEGLFASCSFTDLGLHPTLCAHLQDKMGFQAPTRIQAQAIPVAMSGQHMLVKAATGTGKTLAYLAPIVHLLQMREPRVERTDGTFALVLVPTRELCLQVYGIAQQLVHRFHWLVPGYIMGGENRAKEKARLRKGISILIATPGRLLDHLQHTSSFVYPNMRWIVFDEADSILELGFGKALEDILEHLGSRNDTSNQNKNKMEPMKRQNLLLSATLNEKVNRLAKISLKNPVMIGLDEQNSSAHGKNHTSLLSDDEEEILEKHNVTVEQAVDDFKLPAQLVQRYVKVSCGSRLAILLTILKSLFERQLSHKVVVFLSTCDSVDFHHTVLSQLEWSPGLQLDTDKKQKFISCKVFRLHGNMDQDDRKKSFLGFSSEKSAILVSTDVAARGLDFPKVKCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPIETDYLRDLELHGASLTEYPLQKVLDSFPVNGQRLHKRKQISLDMHPWIMSLQRALESFVTSEDTTKKLARDAFCSWVRAYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLLGRSHQVQLKKRKKEQKRERPAKRRKIPAKR*