Gene Details:

Functional Descriptions:

  • Additionally, we found that overexpression of OsCAF1B retards seed germination and seedling growth.
  • These findings indicate that OsCAF1B participates in sugar-induced Amy3 mRNA degradation and deadenylation, and acts a negative factor for germination and seedling development.
  • The enhancement of cold tolerance by OsCAF1B in transgenic rice seedlings involved OsCAF1B deadenylase gene expression, and was associated with elevated expression of late-response cold-related transcription factor genes.
  • Our results demonstrate that OsCAF1B plays an important role in growth and development of rice seedlings at low temperatures.
  • The increased survival percentage and reduced electrolyte leakage exhibited by OsCAF1B overexpression transgenic lines subjected to cold stress indicate that OsCAF1B plays a positive role in rice growth under low ambient temperature.
  • In the present study, we investigated the function of OsCAF1B in rice by characterizing the molecular and physiological responses to cold stress in OsCAF1B overexpression lines and dominant-negative mutant lines.
  • The results reveal a hitherto undiscovered function of OsCAF1B deadenylase gene expression, which is required for adaptation to cold stress in rice.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os04g58810.1
    AAACAGGCAAACGCACTCGCATCTCCAATTCGGTCCGAATTTTTCCAAATTCCAATTGCTCATCGCGCTTCGAATTCGTTGCCGAGATCCATCCAATCTTTGAGTTAAGACATGCCGTCAGAGTTCGTCGCCGCCAGGAAGAAGCCGCCGCCGGAGTTGTTGTTCGCCGCCGGTCGGAAGAAGCAGCAGCCGCCGCCGCCTGGCATGGCGTTCGTGCCGTCGGAGTTCGCCGCCGCCGGCGTTGGCAGGAAGAGGCAGCCTGCGCCGCCGGTGGAGATACGCCGGGTGTGGGCGCACAACGTGGAGGAGGAATTCCGGATCATCCGCAACGCGATCGATCACTTCCCGTACGTGTCCATGGACACGGAGTTTCCCGGCGTGATCCACCGCCCGACCAAGCACCCCGCCCTGCTCACCGCCGGCGACCGGTACGACCTCCTCCGCCGCAACGTGGACGCGCTCCACCTCATCCAGGTGGGCATCACCCTCGCCGCGTCCCCCACCGCGGCGCCCGCGCTCGCCTTCGAGATCAACCTCTCCGACTTCGACCAGCGCGTCCACCGCCACGCCGCCGAGTCCGTCCAGCTGCTGGCGGAGCACGGCGTGGACCTCGCCGCGCACCGCAGGCACGGCGTCAGGGCGAGCGCGCTGGCGCCGCTGCTCATGTCGTCGGGCCTCGTCTGCTCCCACGGCGCCGTCAAGTGGGTCACCTTCCACTCCGCCTACGACTTCGCCTACCTGGTCAAGCTCCTCATGGGGCGGAAGCTGCCGAGGTCCATGGCCGAGTTCCTGAACCTGGTGCGCGTCTTCTTCGGCGACGAGGTGTACGACGTGAAGCACATGATGCGGCACTGCGGCGGCGAGCTGTACGGCGGGCTGGAGCGCGTGGCGGCGGCGCTGCAGGTGAAGCGCGCGGCGGGGCGGTGCCACCAGGCCGCCTCCGACAGCTTGCTCACCTGGGACGTCTTCCGGCGGATGCGGGAGCTCTACTTCCTCAAGCATGGCGTCGAGGCCTACCAAGGCGTGCTCTTCGGCCTGGAGCTCGACATGGACATGCCCAGCAACAAAACACCCTCGCTGCCGCTGGTGGCAGCGAGATGATACGATCTCCTCTCCTCCGCTGTAAAATTTGTTGATTCGTCGTCTGCAAGAAAGGATTTCTTTCGGCAGATGTACAGTAATAATAAGAGGGAAAAAAAGATGGTTTAATTGATTGGTTAAATTCGGTTGATTTTCTCGTGTGGTGGTTTAAACTTTCACCGTTAAAAAATTGGGCGGCTTCCCCTGTTGTTTGTCATGATGAAACGGCTATAGAGAAAAACGCGTCGTATGAACAAAAAGGCAAAAAAGGCCATGCGCACCGTGTGCAGCGCAGCGAATCGCGTCGCATGTTGGGAGTCAAACGAGCAGCGCGTGTCATTCGGTCAAAGTGCATACTAGTGTACTATGGTCGGCCGGGTTTAGTTCCAAATTTTTCAACAAGTTTTTAACTTTTTCATCGTATCAAAATTTTCCTATATAAAATTTTTTAATTTTTTCATCACATCGTTTCAATTTCAATTAAATTTTTAATTTTAGCGTGAACTAAACACACCTATGCATG
CDS Sequence
  • >LOC_Os04g58810.1
    ATGCCGTCAGAGTTCGTCGCCGCCAGGAAGAAGCCGCCGCCGGAGTTGTTGTTCGCCGCCGGTCGGAAGAAGCAGCAGCCGCCGCCGCCTGGCATGGCGTTCGTGCCGTCGGAGTTCGCCGCCGCCGGCGTTGGCAGGAAGAGGCAGCCTGCGCCGCCGGTGGAGATACGCCGGGTGTGGGCGCACAACGTGGAGGAGGAATTCCGGATCATCCGCAACGCGATCGATCACTTCCCGTACGTGTCCATGGACACGGAGTTTCCCGGCGTGATCCACCGCCCGACCAAGCACCCCGCCCTGCTCACCGCCGGCGACCGGTACGACCTCCTCCGCCGCAACGTGGACGCGCTCCACCTCATCCAGGTGGGCATCACCCTCGCCGCGTCCCCCACCGCGGCGCCCGCGCTCGCCTTCGAGATCAACCTCTCCGACTTCGACCAGCGCGTCCACCGCCACGCCGCCGAGTCCGTCCAGCTGCTGGCGGAGCACGGCGTGGACCTCGCCGCGCACCGCAGGCACGGCGTCAGGGCGAGCGCGCTGGCGCCGCTGCTCATGTCGTCGGGCCTCGTCTGCTCCCACGGCGCCGTCAAGTGGGTCACCTTCCACTCCGCCTACGACTTCGCCTACCTGGTCAAGCTCCTCATGGGGCGGAAGCTGCCGAGGTCCATGGCCGAGTTCCTGAACCTGGTGCGCGTCTTCTTCGGCGACGAGGTGTACGACGTGAAGCACATGATGCGGCACTGCGGCGGCGAGCTGTACGGCGGGCTGGAGCGCGTGGCGGCGGCGCTGCAGGTGAAGCGCGCGGCGGGGCGGTGCCACCAGGCCGCCTCCGACAGCTTGCTCACCTGGGACGTCTTCCGGCGGATGCGGGAGCTCTACTTCCTCAAGCATGGCGTCGAGGCCTACCAAGGCGTGCTCTTCGGCCTGGAGCTCGACATGGACATGCCCAGCAACAAAACACCCTCGCTGCCGCTGGTGGCAGCGAGATGA
Protein Sequence
  • >LOC_Os04g58810.1
    MPSEFVAARKKPPPELLFAAGRKKQQPPPPGMAFVPSEFAAAGVGRKRQPAPPVEIRRVWAHNVEEEFRIIRNAIDHFPYVSMDTEFPGVIHRPTKHPALLTAGDRYDLLRRNVDALHLIQVGITLAASPTAAPALAFEINLSDFDQRVHRHAAESVQLLAEHGVDLAAHRRHGVRASALAPLLMSSGLVCSHGAVKWVTFHSAYDFAYLVKLLMGRKLPRSMAEFLNLVRVFFGDEVYDVKHMMRHCGGELYGGLERVAAALQVKRAAGRCHQAASDSLLTWDVFRRMRELYFLKHGVEAYQGVLFGLELDMDMPSNKTPSLPLVAAR*