Gene Details:
- MSU gene ID: LOC_Os04g58190
- RAPdb gene ID: Os04g0678400
- Gene Symbol: OsDOF18
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- The growth of null mutants of<U+00A0>OsDOF18 was retarded in a medium containing ammonium as the sole nitrogen source.
- These results provide evidence that OsDOF18 mediates ammonium transport and nitrogen distribution, which then affects nitrogen use efficiency.
- Transcription Factor OsDOF18 Controls Ammonium Uptake by Inducing Ammonium Transporters in Rice Roots.
- Among the 10 ammonium transporter genes examined here, expression of OsAMT1;1,<U+00A0>OsAMT1;3, OsAMT2;1, and OsAMT4;1 was reduced in OsDOF18 mutants, demonstrating that the ammonium transporter genes function downstream of OsDOF18.
- Uptake of ammonium was lower in OsDOF18 mutants than in the wild type, while that of nitrate was not affected by the mutation.
Function-related keywords:
Literature:
- Transcription Factor OsDOF18 Controls Ammonium Uptake by Inducing Ammonium Transporters in Rice Roots . DOI: 10.14348/molcells.2017.2261 ; PMID: 28292004
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g58190.2
CTAGCCTAGCCGGTCCACGACGAAAACCAACACATCACCAACTGCTCAGGCATAATTGCTTTGCCGCCCTCCAGGTCGGACTGACTGCTACGTCTCTGTCTACGTATACCCCAGCCTCCTCGTCGTCGTCTCGTACTAGGATCTTGCTACAAATAGCCGGCTGCTTGCTAGCTTTAGCTTCTTCCTTCTCCCGAGAGAGACGATCGAGATCACGCGCCCACAGAAACTGCAGATTAAGCGGCAGAGATTGTAGATAGCGCGAGGTTATTAAGGCCAGCAGTCTGACCGCGCGCGGCATGCCCTTCTGCTGCTGCAACCGACCAAATGGCTCCTGCGGTTGCCTCCTCCCCGTCACTCGTGCTCTCCGCCGCCGCCGCCACCGCCTCCAACAAGCGCCCGGCCGATTCCGACGCCTCGCCGCCGCACCAGGGAGATCGCACGGGGCAGCAGGAGAAGAAGCAGCAGCAGCTGGAGTGCCCGCGCTGCCGATCCACCAACACCAAGTTCTGCTACTACAACAACTACAGCACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCACGGGGGCACGCTCCGCGACGTGCCGGTGGGCGGCGCCTCTCGCCGCGGCGGCGGCGGCAAGCGCCGCAGGGTCTCCGCCGACGCCGACCCTTCCTCGGCGTCGCCGCCGCCACCCACGACTTCCACCACGGACGCGTACGCCGACCTCCCAGCCGGCTTCCCGTTCCTCAGTGACGGCGCCTTCCTGCCGCAGTTCGGCCTCGCCGGCGTTGCGCCGGCCGCGTTCTCTTGGGCATCGGCTGTCCCTGACTTGTACAACTGCGGGATCGCGCCGTGGGACGATGGAACGGCGGTCACCGGCGCGGCGTGGGACAACTTCGCCGACATCGCCGGCCTTGATCTCAGCTGGCCGCCGCCGGGTAACTGACGAACAGTACACAGCTGGTCGCTCGTGTTTTGGGGGGCTCCGGTTTTAGCAAAGCAGCCTCAAGTAGTGCGTTCTTCGATCGGTATGCAGTGACAATCACCAATCCCCAAGCTGACCGGCGCTGAACATCCAAAGCTCCAATGCAAAGGTCGGATGAGCAGTGACCAGGACTGCTCTTGGCAGACGATTGTTTCTCGTCAGGCCAGGACGTTGATACTCCATCCGCTGGAGGATTGCTTGTGCTTGCAACACCTTCACAAACTGGGCGCTTGGTGCATCTATTGACAGTGCCATTCAGATCATGCTCACTGTTCTCTACAGGGGCATCCCGACCCGTGTTCATCACTGCATCGTCTGAATCACTGTTTCTGCTGCTACGGGACCCGAATGAGCCACGGGATTCAGCGCCGGGCCATGTGATAGCCACAGTGACATCATGGCAATGGAAATGCTCATATGAGTTGGTTACATCAACTGCACTCCTGCTTCTGCTCGGATGGGAAGTATTGTCATGCCTCCAGACATACACGTGGGAGTCCTCACTGGCACAGACCACATATTTCCCGTTTGGAGCTACAGAAGCGGATATTTGGCTACTTGTATTTCGGAACCCTGGTGAAAAGATCAAATAAAATGTAAGTGAAACAGTATAAATA - >LOC_Os04g58190.3
CTAGCCTAGCCGGTCCACGACGAAAACCAACACATCACCAACTGCTCAGGCATAATTGCTTTGCCGCCCTCCAGGTCGGACTGACTGCTACGTCTCTGTCTACGTATACCCCAGCCTCCTCGTCGTCGTCTCGTACTAGGATCTTGCTACAAATAGCCGGCTGCTTGCTAGCTTTAGCTTCTTCCTTCTCCCGAGAGAGACGATCGAGATCACGCGCCCACAGAAACTGCAGATTAAGCGGCAGAGATTGTAGATAGCGCGAGGTTATTAAGGCCAGCAGTCTGACCGCGCGCGGCATGCCCTTCTGCTGCTGCAACCGACCAAATGGCTCCTGCGGTTGCCTCCTCCCCGTCACTCGTGCTCTCCGCCGCCGCCGCCACCGCCTCCAACAAGCGCCCGGCCGATTCCGACGCCTCGCCGCCGCACCAGGGAGATCGCACGGGGCAGCAGGAGAAGAAGCAGCAGCAGCTGGAGTGCCCGCGCTGCCGATCCACCAACACCAAGTTCTGCTACTACAACAACTACAGCACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCACGGGGGCACGCTCCGCGACGTGCCGGTGGGCGGCGCCTCTCGCCGCGGCGGCGGCGGCAAGCGCCGCAGGGTCTCCGCCGACGCCGACCCTTCCTCGGCGTCGCCGCCGCCACCCACGACTTCCACCACGGACGCGTACGCCGACCTCCCAGCCGGCTTCCCGTTCCTCAGTGACGGCGCCTTCCTGCCGCAGTTCGGCCTCGCCGGCGTTGCGCCGGCCGCGTTCTCTTGGGCATCGGCTGTCCCTGACTTGTACAACTGCGGGATCGCGCCGTGGGACGATGGAACGGCGGTCACCGGCGCGGCGTGGGACAACTTCGCCGACATCGCCGGCCTTGATCTCAGCTGGCCGCCGCCGGGTAACTGACGAACAGTACACAGCTGGTCGCTCGTGTTTTGGGGGGCTCCGGTTTTAGCAAAGCAGCCTCAAGTAGTGCGTTCTTCGATCGGTATGCAGTGACAATCACCAATCCCCAAGCTGACCGGCGCTGAACATCCAAAGCTCCAATGCAAAGGTCGGATGAGCAGTGACCAGGACTGCTCTTGGCAGACGATTGTTTCTCGTCAGGCCAGGACGTTGATACTCCATCCGCTGGAGGATTGCTTGTGCTTGCAACACCTTCACAAACTGGGCGCTTGGTGCATCTATTGACAGTGCCATTCAGATCATGCTCACTGTTCTCTACAGGGGCATCCCGACCCGTGTTCATCACTGCATCGTCTGAATCACTGTTTCTGCTGCTACGGGACCCGAATGAGCCACGGGATTCAGCGCCGGGCCATGTGATAGCCACAGTGACATCATGGCAATGGAAATGCTCATATGAGTTGGTTACATCAACTGCACTCCTGCTTCTGCTCGGATGGGAAGTATTGTCATGCCTCCAGACATACACGTGGGAGTCCTCACTGGCACAGACCACATATTTCCCGTTTGGAGCTACAGAAGCGGATATTTGGCTACTTGTATTTCGGAACCCTGGTGAAAAGATCAAATAAAATGTAAGTGAAACAGTATAAATA - >LOC_Os04g58190.1
CTAGCCTAGCCGGTCCACGACGAAAACCAACACATCACCAACTGCTCAGGCATAATTGCTTTGCCGCCCTCCAGGTCGGACTGACTGCTACGTCTCTGTCTACGTATACCCCAGCCTCCTCGTCGTCGTCTCGTACTAGGATCTTGCTACAAATAGCCGGCTGCTTGCTAGCTTTAGCTTCTTCCTTCTCCCGAGAGAGACGATCGAGATCACGCGCCCACAGAAACTGCAGATTAAGCGGCAGAGATTGTAGATAGCGCGAGGTTATTAAGGCCAGCAGTCTGACCGCGCGCGGCATGCCCTTCTGCTGCTGCAACCGACCAAATGGCTCCTGCGGTTGCCTCCTCCCCGTCACTCGTGCTCTCCGCCGCCGCCGCCACCGCCTCCAACAAGCGCCCGGCCGATTCCGACGCCTCGCCGCCGCACCAGGGAGATCGCACGGGGCAGCAGGAGAAGAAGCAGCAGCAGCTGGAGTGCCCGCGCTGCCGATCCACCAACACCAAGTTCTGCTACTACAACAACTACAGCACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCACGGGGGCACGCTCCGCGACGTGCCGGTGGGCGGCGCCTCTCGCCGCGGCGGCGGCGGCAAGCGCCGCAGGGTCTCCGCCGACGCCGACCCTTCCTCGGCGTCGCCGCCGCCACCCACGACTTCCACCACGGACGCGTACGCCGACCTCCCAGCCGGCTTCCCGTTCCTCAGTGACGGCGCCTTCCTGCCGCAGTTCGGCCTCGCCGGCGTTGCGCCGGCCGCGTTCTCTTGGGCATCGGCTGTCCCTGACTTGTACAACTGCGGGATCGCGCCGTGGGACGATGGAACGGCGGTCACCGGCGCGGCGTGGGACAACTTCGCCGACATCGCCGGCCTTGATCTCAGCTGGCCGCCGCCGGGTAACTGACGAACAGTACACAGCTGGTCGCTCGTGTTTTGGGGGGCTCCGGTTTTAGCAAAGCAGCCTCAAGTAGTGCGTTCTTCGATCGGTATGCAGTGACAATCACCAATCCCCAAGCTGACCGGCGCTGAACATCCAAAGCTCCAATGCAAAGGTCGGATGAGCAGTGACCAGGACTGCTCTTGGCAGACGATTGTTTCTCGTCAGGCCAGGACGTTGATACTCCATCCGCTGGAGGATTGCTTGTGCTTGCAACACCTTCACAAACTGGGCGCTTGGTGCATCTATTGACAGTGCCATTCAGATCATGCTCACTGTTCTCTACAGGGGCATCCCGACCCGTGTTCATCACTGCATCGTCTGAATCACTGTTTCTGCTGCTACGGGACCCGAATGAGCCACGGGATTCAGCGCCGGGCCATGTGATAGCCACAGTGACATCATGGCAATGGAAATGCTCATATGAGTTGGTTACATCAACTGCACTCCTGCTTCTGCTCGGATGGGAAGTATTGTCATGCCTCCAGACATACACGTGGGAGTCCTCACTGGCACAGACCACATATTTCCCGTTTGGAGCTACAGAAGCGGATATTTGGCTACTTGTATTTCGGAACCCTGGTGAAAAGATCAAATAAAATGTAAGTGAAACAGTATAAATA
CDS Sequence
- >LOC_Os04g58190.2
ATGGCTCCTGCGGTTGCCTCCTCCCCGTCACTCGTGCTCTCCGCCGCCGCCGCCACCGCCTCCAACAAGCGCCCGGCCGATTCCGACGCCTCGCCGCCGCACCAGGGAGATCGCACGGGGCAGCAGGAGAAGAAGCAGCAGCAGCTGGAGTGCCCGCGCTGCCGATCCACCAACACCAAGTTCTGCTACTACAACAACTACAGCACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCACGGGGGCACGCTCCGCGACGTGCCGGTGGGCGGCGCCTCTCGCCGCGGCGGCGGCGGCAAGCGCCGCAGGGTCTCCGCCGACGCCGACCCTTCCTCGGCGTCGCCGCCGCCACCCACGACTTCCACCACGGACGCGTACGCCGACCTCCCAGCCGGCTTCCCGTTCCTCAGTGACGGCGCCTTCCTGCCGCAGTTCGGCCTCGCCGGCGTTGCGCCGGCCGCGTTCTCTTGGGCATCGGCTGTCCCTGACTTGTACAACTGCGGGATCGCGCCGTGGGACGATGGAACGGCGGTCACCGGCGCGGCGTGGGACAACTTCGCCGACATCGCCGGCCTTGATCTCAGCTGGCCGCCGCCGGGTAACTGA - >LOC_Os04g58190.3
ATGGCTCCTGCGGTTGCCTCCTCCCCGTCACTCGTGCTCTCCGCCGCCGCCGCCACCGCCTCCAACAAGCGCCCGGCCGATTCCGACGCCTCGCCGCCGCACCAGGGAGATCGCACGGGGCAGCAGGAGAAGAAGCAGCAGCAGCTGGAGTGCCCGCGCTGCCGATCCACCAACACCAAGTTCTGCTACTACAACAACTACAGCACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCACGGGGGCACGCTCCGCGACGTGCCGGTGGGCGGCGCCTCTCGCCGCGGCGGCGGCGGCAAGCGCCGCAGGGTCTCCGCCGACGCCGACCCTTCCTCGGCGTCGCCGCCGCCACCCACGACTTCCACCACGGACGCGTACGCCGACCTCCCAGCCGGCTTCCCGTTCCTCAGTGACGGCGCCTTCCTGCCGCAGTTCGGCCTCGCCGGCGTTGCGCCGGCCGCGTTCTCTTGGGCATCGGCTGTCCCTGACTTGTACAACTGCGGGATCGCGCCGTGGGACGATGGAACGGCGGTCACCGGCGCGGCGTGGGACAACTTCGCCGACATCGCCGGCCTTGATCTCAGCTGGCCGCCGCCGGGTAACTGA - >LOC_Os04g58190.1
ATGGCTCCTGCGGTTGCCTCCTCCCCGTCACTCGTGCTCTCCGCCGCCGCCGCCACCGCCTCCAACAAGCGCCCGGCCGATTCCGACGCCTCGCCGCCGCACCAGGGAGATCGCACGGGGCAGCAGGAGAAGAAGCAGCAGCAGCTGGAGTGCCCGCGCTGCCGATCCACCAACACCAAGTTCTGCTACTACAACAACTACAGCACGTCGCAGCCGCGCCACTTCTGCCGCGCCTGCCGCCGCTACTGGACGCACGGGGGCACGCTCCGCGACGTGCCGGTGGGCGGCGCCTCTCGCCGCGGCGGCGGCGGCAAGCGCCGCAGGGTCTCCGCCGACGCCGACCCTTCCTCGGCGTCGCCGCCGCCACCCACGACTTCCACCACGGACGCGTACGCCGACCTCCCAGCCGGCTTCCCGTTCCTCAGTGACGGCGCCTTCCTGCCGCAGTTCGGCCTCGCCGGCGTTGCGCCGGCCGCGTTCTCTTGGGCATCGGCTGTCCCTGACTTGTACAACTGCGGGATCGCGCCGTGGGACGATGGAACGGCGGTCACCGGCGCGGCGTGGGACAACTTCGCCGACATCGCCGGCCTTGATCTCAGCTGGCCGCCGCCGGGTAACTGA
Protein Sequence
- >LOC_Os04g58190.2
MAPAVASSPSLVLSAAAATASNKRPADSDASPPHQGDRTGQQEKKQQQLECPRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPVGGASRRGGGGKRRRVSADADPSSASPPPPTTSTTDAYADLPAGFPFLSDGAFLPQFGLAGVAPAAFSWASAVPDLYNCGIAPWDDGTAVTGAAWDNFADIAGLDLSWPPPGN* - >LOC_Os04g58190.3
MAPAVASSPSLVLSAAAATASNKRPADSDASPPHQGDRTGQQEKKQQQLECPRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPVGGASRRGGGGKRRRVSADADPSSASPPPPTTSTTDAYADLPAGFPFLSDGAFLPQFGLAGVAPAAFSWASAVPDLYNCGIAPWDDGTAVTGAAWDNFADIAGLDLSWPPPGN* - >LOC_Os04g58190.1
MAPAVASSPSLVLSAAAATASNKRPADSDASPPHQGDRTGQQEKKQQQLECPRCRSTNTKFCYYNNYSTSQPRHFCRACRRYWTHGGTLRDVPVGGASRRGGGGKRRRVSADADPSSASPPPPTTSTTDAYADLPAGFPFLSDGAFLPQFGLAGVAPAAFSWASAVPDLYNCGIAPWDDGTAVTGAAWDNFADIAGLDLSWPPPGN*