Information report for IPK1;OsIPK1
Gene Details
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Functional Descriptions
- 85-fold down-regulation in IPK1 transcripts, which correlated to a significant reduction in phytate levels and a concomitant increase in the amount of inorganic phosphate (Pi).
- Development of low phytate rice by RNAi mediated seed-specific silencing of inositol 1,3,4,5,6-pentakisphosphate 2-kinase gene (IPK1).
- The results provide evidence that silencing of IPK1 gene can mediate a substantial reduction in seed phytate levels without hampering the growth and development of transgenic rice plants.
- In the present study, we report the RNAi-mediated seed-specific silencing (using the Oleosin18 promoter) of the IPK1 gene, which catalyzes the last step of phytic acid biosynthesis in rice.
Literature and News
- Development of low phytate rice by RNAi mediated seed-specific silencing of inositol 1,3,4,5,6-pentakisphosphate 2-kinase gene (IPK1) . DOI: 10.1371/journal.pone.0068161 ; PMID: 23844166
- An Inositol 1, 3, 4, 5, 6-Pentakisphosphate 2-Kinase 1 Mutant with a 33-nt Deletion Showed Enhanced Tolerance to Salt and Drought Stress in Rice . DOI: 10.3390/plants10010023 ; PMID: 33374298
Gene Resources
- UniProt: Q7XQZ6
- EMBL: AK102842, AL606608, AP008210
- AlphaFoldDB: Q7XQZ6
- EnsemblPlants: Os04t0661200-01
- Gramene: Os04t0661200-01
- KEGG: dosa:Os04g0661200
- Orthologous matrix: HRQHCIV
- InterPro: IPR009286, IPR043001
- PANTHER: PTHR14456, PTHR14456:SF2
- Gene3D: 3.30.200.110
- OrthoDB: Q7XQZ6
- SWISS-MODEL: Q7XQZ6
- eggNOG: KOG4749
Sequences
cDNA Sequence
- >LOC_Os04g56580.1
GCTAATCCTTCCTTGCAGGGGAGGGGAATCTGCCGCTTTCCTCATCGTCGGCTCCACTTCCACTTCCTCTTCCTCCTCCTCGAGGACGAGGAGGAAATTGGCAGCTGGAGGCTTGGAGCGCGCTGCATCATCCCGCCCGCCCTGCTGCTGCGGCGATCGCCGGAGCAGGGCTGCAGGGGATCCCCACGGCCGCAGCAGCTGTTGTTATCTGATTCTGTGTGGGGATGGAGGTGGTTCTGCATGAGGGGGATGCCAAAGATTGGGTTTACAAAGGAGAAGGTGCAGCGAATCTAATCCTCAGCTACACTGGCTCGTCACCTTCTATGCTTGGCAAGGTTCTGCGAGTCAAAAAGATTCTAAAAGACAAGGGACAACCGGCACCAAACTGTATAGTCTTCTCAAGTCATGAGGAACATCTGTGGGGCAAGATCCCAGGATTGTTGGAATCTGTTAAAAATGATTGCTTGCCACAAGCCTATGCTACAATTGTTATGAGCCAACATTTGGGTGCCAATCATGTTGATGGCGGGGTCCGTGTACGTGTGTCTAAGAACTTTTTCGAGCTTGCTGGAAAGAATGTGCTTGACAACCGTCCTGCATGGAGAGTGAATGCTAGTGCAATTGATGCTGGAGCTGATTCTGCTCTTCTAATTTCTGACCACACATTATTTTCCGGTAATCCTAGAGGAAGCAGTTGCATAGCAGTGGAGATAAAGGCAAAATGTGGATTTCTTCCGTCATCTGAATACATATCGAAGGAGAATTCTATCAAGAAACAAGTAACACGGTATAAGATGCATCAGCACCTAAAATTTCATCTGGGAGAGATATCGAAGACAAGTGAATACGATCCCCTAGATTTATTTTCTGGATCAAAAGAAAGAATACATATGGCTATCAAGTCATTTTTTTCAACTCCTCAGAACAACTTTAGAATTTTTGTGGATGGTTCTTTAGTTTTTGGTGGCATGGGAGGTGGCGCAGATAGTGTTCATCCTAATGAAACAGAGAAATGTCTTGAAGATCTGAGCAAGGTTACTGGCTTACAACTATCTGACTTTATTGAGCTCCTGTCAGAGGCAATCTTTAAGTCTGGAGTGTTGGGTAAACTTTTAGCCACTCAAAAACTGGATGATCATGACATCGAAGGGGCGATTCATCTGTACTATAACATCATTTCTCAGCCTTGTTTGGTATGCAAAAGTATAACTGATACAGAACTTCTGCGCAAGTACTCCACCTTGCATTCTCTTCCATTGGACAAGAGTGAGAAGATTGTCAGGGACTTTCTTATCTCTGCTACTGCAAAAGATTGTAGCCTAATGATCAGCTTTCGACCAAGACAGAGTGGAACAACAGATTCTGAGTACGATTCTGTATTTCTTGATTCAGTGAACCAAAGCTATGATTACAAGGCATATTTTATTGATCTGGATGTGAAACCCTTGGATAAGATGGTACATTACTTTAAATTGGATCAAAAGATAGTCAATTTCTACACTAGAAATGGAGAAGTTGGGGGAGATCCACGTGATCCTCCAAAGGGATGTGGCCCTAGGTGACACAAAGGTTCAGCTCCAAAGGTTCAGCTCCAACATTGACGACCTTGAAATATAAAGGGCATAGGACAAGTGTCTGTTGTATCTTGGTGATTGTTGTGTTTCTACAAGTGTGCATGTCCAATGTGCAGGTTCTCCTCCCTTCTAGGGAAAACGTGTAAGAGAGTGGTAGTTGTTGTAGTACATCCTGTATACCGTGTGGTTTGCCTCAGCAGTAGGCCGAATTTTCAGTAGACAAACATTAAGAAGAGTTAATAAACTGTATACTGAGGCATCCACGTTTACCTTGGAAATCTATGATAAATTCCCGTATACTCAGCTTGCTGTGAATCTGTGATCTGAGTTCTGAC
CDS Sequence
- >LOC_Os04g56580.1
ATGGAGGTGGTTCTGCATGAGGGGGATGCCAAAGATTGGGTTTACAAAGGAGAAGGTGCAGCGAATCTAATCCTCAGCTACACTGGCTCGTCACCTTCTATGCTTGGCAAGGTTCTGCGAGTCAAAAAGATTCTAAAAGACAAGGGACAACCGGCACCAAACTGTATAGTCTTCTCAAGTCATGAGGAACATCTGTGGGGCAAGATCCCAGGATTGTTGGAATCTGTTAAAAATGATTGCTTGCCACAAGCCTATGCTACAATTGTTATGAGCCAACATTTGGGTGCCAATCATGTTGATGGCGGGGTCCGTGTACGTGTGTCTAAGAACTTTTTCGAGCTTGCTGGAAAGAATGTGCTTGACAACCGTCCTGCATGGAGAGTGAATGCTAGTGCAATTGATGCTGGAGCTGATTCTGCTCTTCTAATTTCTGACCACACATTATTTTCCGGTAATCCTAGAGGAAGCAGTTGCATAGCAGTGGAGATAAAGGCAAAATGTGGATTTCTTCCGTCATCTGAATACATATCGAAGGAGAATTCTATCAAGAAACAAGTAACACGGTATAAGATGCATCAGCACCTAAAATTTCATCTGGGAGAGATATCGAAGACAAGTGAATACGATCCCCTAGATTTATTTTCTGGATCAAAAGAAAGAATACATATGGCTATCAAGTCATTTTTTTCAACTCCTCAGAACAACTTTAGAATTTTTGTGGATGGTTCTTTAGTTTTTGGTGGCATGGGAGGTGGCGCAGATAGTGTTCATCCTAATGAAACAGAGAAATGTCTTGAAGATCTGAGCAAGGTTACTGGCTTACAACTATCTGACTTTATTGAGCTCCTGTCAGAGGCAATCTTTAAGTCTGGAGTGTTGGGTAAACTTTTAGCCACTCAAAAACTGGATGATCATGACATCGAAGGGGCGATTCATCTGTACTATAACATCATTTCTCAGCCTTGTTTGGTATGCAAAAGTATAACTGATACAGAACTTCTGCGCAAGTACTCCACCTTGCATTCTCTTCCATTGGACAAGAGTGAGAAGATTGTCAGGGACTTTCTTATCTCTGCTACTGCAAAAGATTGTAGCCTAATGATCAGCTTTCGACCAAGACAGAGTGGAACAACAGATTCTGAGTACGATTCTGTATTTCTTGATTCAGTGAACCAAAGCTATGATTACAAGGCATATTTTATTGATCTGGATGTGAAACCCTTGGATAAGATGGTACATTACTTTAAATTGGATCAAAAGATAGTCAATTTCTACACTAGAAATGGAGAAGTTGGGGGAGATCCACGTGATCCTCCAAAGGGATGTGGCCCTAGGTGA
Protein Sequence
- >LOC_Os04g56580.1
MEVVLHEGDAKDWVYKGEGAANLILSYTGSSPSMLGKVLRVKKILKDKGQPAPNCIVFSSHEEHLWGKIPGLLESVKNDCLPQAYATIVMSQHLGANHVDGGVRVRVSKNFFELAGKNVLDNRPAWRVNASAIDAGADSALLISDHTLFSGNPRGSSCIAVEIKAKCGFLPSSEYISKENSIKKQVTRYKMHQHLKFHLGEISKTSEYDPLDLFSGSKERIHMAIKSFFSTPQNNFRIFVDGSLVFGGMGGGADSVHPNETEKCLEDLSKVTGLQLSDFIELLSEAIFKSGVLGKLLATQKLDDHDIEGAIHLYYNIISQPCLVCKSITDTELLRKYSTLHSLPLDKSEKIVRDFLISATAKDCSLMISFRPRQSGTTDSEYDSVFLDSVNQSYDYKAYFIDLDVKPLDKMVHYFKLDQKIVNFYTRNGEVGGDPRDPPKGCGPR*