Gene Details:
- MSU gene ID: LOC_Os04g56170
- RAPdb gene ID: Os04g0656500
- Gene Symbol: OsLG1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Association analysis indicates that a single-nucleotide polymorphism-6 in the OsLG1 regulatory region led to a compact panicle architecture in cultivars during rice domestication.
- Transgenic plants harboring the OsLG1 promoter:GUS (beta-glucuronidase) reporter gene construct display preferential expression in developing laminar joint regions and meristemic regions.
- Here we show that the spread panicle architecture of wild rice is controlled by a dominant gene, OsLG1, a previously reported SBP-domain transcription factor that controls rice ligule development.
- These results indicate that OsLG1 is a transcriptional factor that plays an important role in building the laminar joint between leaf blade and leaf sheath boundary, thereby controlling ligule and auricle development.
- OsLG1 regulates a closed panicle trait in domesticated rice.
Function-related keywords:
- domestication , meristem , panicle , panicle-architecture , architecture , leaf , transcription-factor , sheath
Literature:
- Mutations in the rice liguleless gene result in a complete loss of the auricle, ligule, and laminar joint . DOI: 10.1007/s11103-007-9196-1 ; PMID: 17594063
- Genetic control of inflorescence architecture during rice domestication . DOI: 10.1038/ncomms3200 ; PMID: 23884108
- OsLG1 regulates a closed panicle trait in domesticated rice . DOI: 10.1038/ng.2567 ; PMID: 23435087
- Oryza sativa LIGULELESS 2s determine lamina joint positioning and differentiation by inhibiting auxin signaling . DOI: 10.1111/nph.16970 ; PMID: 32985689
Related News:
Gene Resources:
- NCBI ID: AK068104
- UniProt accessions:
Sequences:
cDNA Sequence
- >LOC_Os04g56170.1
GCAGCAGAGGCCGCAGCAGCAGCAGCAGCTATCACCCCCTCACCAACTCCAATTAAGATAGCTCCCGGCCACCCCAACCCAAGCCCTTCTCTTCTCTCTCCCTCTTCTGGTTTGGTTTGTTGCTGGCCCTAGCATCAGCGAGAGAGGCCAGAGGCAGACAGGCAGCTGCTGCTAGATATAGCTAGCCGGCAACGCACTCCACATCCAGCCGCCCTCCTGCTCGATCCATCCATCCATCCACCCGAACCCTAGATAGATGAAAAAGGGCAAAACCATGGCATATGCCGCGCGATCCATCTCTGCGCGCTGCTGATATAAGAGATCCATCGAGTAGTAGCCCTGTTAGCTAGAGCGAGCTCGATCGATGGAGAGGATGATGGTGGTGTCCTTGCCGCGTCCTCTCTTCCATACCTAGAACTTTCCGTGTGTGTGCGACTGCGTGAGTAGTGAGGGATAGATAAAGGAGGGAGGAGGAGACAGGCCGCGAGGATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCCACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGCATCCAGAGGGATCACCACCAACACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCGAGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACCATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCCGCTGCCGGCGGCGCCGGTGGCGGAGGCAACCCCTACAGCCACTTCACGGCGGCGGCGGCGGCCGGGAGCACCTTCCAGTCGTACTACCAGCAGCCGCCGCAGGACGCGCCGGAGTACTACTTCCCGACGCTGGTCAGCTCCGCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTCGGCCTCAACCTCGGCTACCGGACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCACCACCCGCCGCGGTGCCAGGCCGAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTACCACCGCCGCCACAAGGTGTGCGAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGCGGCCTCCACCAGAGATTCTGCCAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGACGATGCCAAGAAGAGCTGCAGGAAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCGAAGCCGTCCGACGGCGAGCATTCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCAGCTACTAAAGACAAAGCAGGAAGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAGACACAGCTACTGGGGGGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAGCAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCAAATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGCAACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAGTATAATTAATATTTATCAATCATCTCGATCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGTACGTGTGTGTACGTCCAGACATCTCTTTTCATCTTGTCTCTATTAATTACTGTAATTTGGATATAATAATGATAGCTTATGCGTTATTGTCATGTGTACTGGCAGTTTTCCTCGTTGGAGAAGCTGGTTAATTAGCCGGTACATCAAATTTAGTGTAATTTATAGTTTGGTGCCACAAGAGGCTAGTTGGTCAATTAATTTCATCTAGGAAGAATGCACCACATGAAAGTTGTACGAATTTCTACATAACTACCTGAATTTTTCGTGCAATTGCACATGGCTAGATATTGTAGTTCTTTGACTATATATATATAGTTTTAATTTATTTTCT
CDS Sequence
- >LOC_Os04g56170.1
ATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCCACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGCATCCAGAGGGATCACCACCAACACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCGAGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACCATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCCGCTGCCGGCGGCGCCGGTGGCGGAGGCAACCCCTACAGCCACTTCACGGCGGCGGCGGCGGCCGGGAGCACCTTCCAGTCGTACTACCAGCAGCCGCCGCAGGACGCGCCGGAGTACTACTTCCCGACGCTGGTCAGCTCCGCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTCGGCCTCAACCTCGGCTACCGGACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCACCACCCGCCGCGGTGCCAGGCCGAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTACCACCGCCGCCACAAGGTGTGCGAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGCGGCCTCCACCAGAGATTCTGCCAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGACGATGCCAAGAAGAGCTGCAGGAAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCGAAGCCGTCCGACGGCGAGCATTCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCAGCTACTAAAGACAAAGCAGGAAGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAGACACAGCTACTGGGGGGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAGCAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCAAATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGCAACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAG
Protein Sequence
- >LOC_Os04g56170.1
MMNVPSAAAASSCDDFGYNATPPPPPSLLPIMDQDGGGGSIQRDHHQHHNHQQLGYNLEPSSLALLPPSNAAAAAAHHATIAHASPHDLLQFYPTSHYLAAAGGAGGGGNPYSHFTAAAAAGSTFQSYYQQPPQDAPEYYFPTLVSSAEENMASFAATQLGLNLGYRTYFPPRGGYTYGHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRRRKSKPSDGEHSGEKRRAQANKSAATKDKAGSSSKNAGIGDGFETQLLGGAHMSKDQDQAMDLGEVVKEAVDPKGKASMQQQQQQAHHGIHQQSHQQHGFPFPSSSGSCLFPQSQGAVSSTDTSNIAQVQEPSLAFHQQHHQHSNILQLGQAMFDLDFDH*