Information report for OsLG1
Gene Details
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Functional Descriptions
- Association analysis indicates that a single-nucleotide polymorphism-6 in the OsLG1 regulatory region led to a compact panicle architecture in cultivars during rice domestication.
- Transgenic plants harboring the OsLG1 promoter:GUS (beta-glucuronidase) reporter gene construct display preferential expression in developing laminar joint regions and meristemic regions.
- Here we show that the spread panicle architecture of wild rice is controlled by a dominant gene, OsLG1, a previously reported SBP-domain transcription factor that controls rice ligule development.
- These results indicate that OsLG1 is a transcriptional factor that plays an important role in building the laminar joint between leaf blade and leaf sheath boundary, thereby controlling ligule and auricle development.
- OsLG1 regulates a closed panicle trait in domesticated rice.
Functional Keywords
Literature and News
- Mutations in the rice liguleless gene result in a complete loss of the auricle, ligule, and laminar joint . DOI: 10.1007/s11103-007-9196-1 ; PMID: 17594063
- Genetic control of inflorescence architecture during rice domestication . DOI: 10.1038/ncomms3200 ; PMID: 23884108
- OsLG1 regulates a closed panicle trait in domesticated rice . DOI: 10.1038/ng.2567 ; PMID: 23435087
- Oryza sativa LIGULELESS 2s determine lamina joint positioning and differentiation by inhibiting auxin signaling . DOI: 10.1111/nph.16970 ; PMID: 32985689
Gene Resources
- UniProt: Q7XPY1
- EMBL: AK068104, AL606685, AP008210
- AlphaFoldDB: Q7XPY1
- EnsemblPlants: Os04t0656500-01
- Gramene: Os04t0656500-01
- KEGG: dosa:Os04g0656500
- Orthologous matrix: QFYPTSH
- InterPro: IPR004333, IPR036893, IPR044817
- PANTHER: PTHR31251, PTHR31251:SF198
- SUPFAM: SSF103612
- PROSITE: PS51141
- Gene3D: 4.10.1100.10
- OrthoDB: Q7XPY1
- SWISS-MODEL: Q7XPY1
- eggNOG: ENOG502QWHY
Sequences
cDNA Sequence
- >LOC_Os04g56170.1
GCAGCAGAGGCCGCAGCAGCAGCAGCAGCTATCACCCCCTCACCAACTCCAATTAAGATAGCTCCCGGCCACCCCAACCCAAGCCCTTCTCTTCTCTCTCCCTCTTCTGGTTTGGTTTGTTGCTGGCCCTAGCATCAGCGAGAGAGGCCAGAGGCAGACAGGCAGCTGCTGCTAGATATAGCTAGCCGGCAACGCACTCCACATCCAGCCGCCCTCCTGCTCGATCCATCCATCCATCCACCCGAACCCTAGATAGATGAAAAAGGGCAAAACCATGGCATATGCCGCGCGATCCATCTCTGCGCGCTGCTGATATAAGAGATCCATCGAGTAGTAGCCCTGTTAGCTAGAGCGAGCTCGATCGATGGAGAGGATGATGGTGGTGTCCTTGCCGCGTCCTCTCTTCCATACCTAGAACTTTCCGTGTGTGTGCGACTGCGTGAGTAGTGAGGGATAGATAAAGGAGGGAGGAGGAGACAGGCCGCGAGGATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCCACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGCATCCAGAGGGATCACCACCAACACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCGAGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACCATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCCGCTGCCGGCGGCGCCGGTGGCGGAGGCAACCCCTACAGCCACTTCACGGCGGCGGCGGCGGCCGGGAGCACCTTCCAGTCGTACTACCAGCAGCCGCCGCAGGACGCGCCGGAGTACTACTTCCCGACGCTGGTCAGCTCCGCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTCGGCCTCAACCTCGGCTACCGGACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCACCACCCGCCGCGGTGCCAGGCCGAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTACCACCGCCGCCACAAGGTGTGCGAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGCGGCCTCCACCAGAGATTCTGCCAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGACGATGCCAAGAAGAGCTGCAGGAAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCGAAGCCGTCCGACGGCGAGCATTCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCAGCTACTAAAGACAAAGCAGGAAGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAGACACAGCTACTGGGGGGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAGCAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCAAATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGCAACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAGTATAATTAATATTTATCAATCATCTCGATCTCTCCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCCTCGTACGTGTGTGTACGTCCAGACATCTCTTTTCATCTTGTCTCTATTAATTACTGTAATTTGGATATAATAATGATAGCTTATGCGTTATTGTCATGTGTACTGGCAGTTTTCCTCGTTGGAGAAGCTGGTTAATTAGCCGGTACATCAAATTTAGTGTAATTTATAGTTTGGTGCCACAAGAGGCTAGTTGGTCAATTAATTTCATCTAGGAAGAATGCACCACATGAAAGTTGTACGAATTTCTACATAACTACCTGAATTTTTCGTGCAATTGCACATGGCTAGATATTGTAGTTCTTTGACTATATATATATAGTTTTAATTTATTTTCT
CDS Sequence
- >LOC_Os04g56170.1
ATGATGAACGTTCCATCCGCCGCTGCCGCGAGCTCCTGCGATGATTTCGGCTACAACGCCACCCCGCCGCCGCCGCCGTCGCTTCTCCCAATCATGGACCAGGACGGCGGCGGCGGTAGCATCCAGAGGGATCACCACCAACACCACAACCACCAGCAGCTCGGCTACAACCTGGAGCCGAGCTCCCTAGCTCTGCTTCCCCCTTCCAACGCCGCCGCCGCCGCAGCACACCACGCCACCATCGCCCACGCCTCCCCACATGACCTCCTCCAGTTCTACCCGACCTCGCACTACCTCGCCGCTGCCGGCGGCGCCGGTGGCGGAGGCAACCCCTACAGCCACTTCACGGCGGCGGCGGCGGCCGGGAGCACCTTCCAGTCGTACTACCAGCAGCCGCCGCAGGACGCGCCGGAGTACTACTTCCCGACGCTGGTCAGCTCCGCCGAGGAGAACATGGCCAGCTTCGCCGCCACCCAGCTCGGCCTCAACCTCGGCTACCGGACCTACTTCCCGCCGAGAGGCGGCTACACCTACGGCCACCACCCGCCGCGGTGCCAGGCCGAGGGCTGCAAGGCCGACCTCTCCAGCGCCAAGCGCTACCACCGCCGCCACAAGGTGTGCGAGCACCACTCCAAGGCGCCCGTCGTCGTCACCGCCGGCGGCCTCCACCAGAGATTCTGCCAGCAGTGCAGCAGATTCCATCTTCTTGATGAGTTCGACGATGCCAAGAAGAGCTGCAGGAAGCGACTCGCCGACCACAACCGCCGGCGGAGGAAGTCGAAGCCGTCCGACGGCGAGCATTCTGGTGAAAAGAGAAGGGCGCAGGCGAATAAATCGGCAGCTACTAAAGACAAAGCAGGAAGTAGCAGCAAGAACGCAGGCATTGGAGACGGTTTCGAGACACAGCTACTGGGGGGTGCACACATGTCCAAAGATCAAGACCAAGCCATGGATCTGGGAGAGGTGGTGAAAGAAGCTGTAGATCCCAAAGGTAAGGCATCGATGCAGCAGCAGCAGCAGCAAGCACATCATGGGATTCATCAGCAGAGCCACCAGCAGCATGGCTTCCCTTTCCCTTCGTCGTCTGGCTCGTGCTTATTCCCTCAGAGCCAAGGAGCTGTCTCGAGCACTGACACATCAAATATAGCTCAAGTGCAAGAACCAAGCTTAGCCTTCCATCAGCAGCATCACCAACACAGCAACATCCTTCAGCTTGGACAGGCGATGTTTGATCTCGACTTCGATCACTAG
Protein Sequence
- >LOC_Os04g56170.1
MMNVPSAAAASSCDDFGYNATPPPPPSLLPIMDQDGGGGSIQRDHHQHHNHQQLGYNLEPSSLALLPPSNAAAAAAHHATIAHASPHDLLQFYPTSHYLAAAGGAGGGGNPYSHFTAAAAAGSTFQSYYQQPPQDAPEYYFPTLVSSAEENMASFAATQLGLNLGYRTYFPPRGGYTYGHHPPRCQAEGCKADLSSAKRYHRRHKVCEHHSKAPVVVTAGGLHQRFCQQCSRFHLLDEFDDAKKSCRKRLADHNRRRRKSKPSDGEHSGEKRRAQANKSAATKDKAGSSSKNAGIGDGFETQLLGGAHMSKDQDQAMDLGEVVKEAVDPKGKASMQQQQQQAHHGIHQQSHQQHGFPFPSSSGSCLFPQSQGAVSSTDTSNIAQVQEPSLAFHQQHHQHSNILQLGQAMFDLDFDH*