Gene Details:
- MSU gene ID: LOC_Os04g54900
- RAPdb gene ID: Os04g0641700
- Gene Symbol: ILI1
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Overexpression and RNA interference suppression of ILI1 increase and reduce, respectively, rice laminar inclination, confirming a positive role of ILI1 in leaf bending.
- ILI1 and PRE1 interact with basic helix-loop-helix (bHLH) protein IBH1 (ILI1 binding bHLH), whose overexpression causes erect leaf in rice and dwarfism in Arabidopsis.
- We identified a rice mutant (ILI1-D) showing an increased lamina inclination phenotype similar to that caused by BR treatment.
- BR increases the RNA levels of ILI1 and PRE1 but represses IBH1 through the transcription factor BZR1.
- Thus, ILI1 and PRE1 may inactivate inhibitory bHLH transcription factors through heterodimerization.
- The spatial and temporal expression patterns support roles of ILI1 in laminar joint bending and PRE1/At IBH1 in the transition from growth of young organs to growth arrest.
- LIC directly regulated target genes such as INCREASED LEAF INCLINATION 1 (ILI1) to oppose the action of BZR1.
- Overexpression of ILI1 or PRE1 increases cell elongation and suppresses dwarf phenotypes caused by overexpression of IBH1 in Arabidopsis.
Function-related keywords:
- leaf , BR , transcription-factor , lamina , cell-elongation , erect , growth , dwarf
Literature:
- Dynamics of brassinosteroid response modulated by negative regulator LIC in rice . DOI: 10.1371/journal.pgen.1002686 ; PMID: 22570626
- Antagonistic HLH/bHLH transcription factors mediate brassinosteroid regulation of cell elongation and plant development in rice and Arabidopsis . DOI: 10.1105/tpc.109.070441 ; PMID: 20009022
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g54900.1
TTGTAATTTGCAACCATGTCGAGCAGCCGGAGGTCGCGCTCACGGCGAGCCGGGAGCTCGGTGCCGTCGTCGTCGTCGTCGTCGAGGACGTCGATCTCGGAGGACCAGATCGCCGAGCTTCTCTCCAAGCTTCAGGCCCTGCTCCCGGAGTCTCAGGCTCGCAATGGCGCCCATAGGGGCTCGGCGGCGAGGGTTTTGCAGGAGACGTGCAGCTACATCAGGAGCCTGCACCAGGAGGTGGACAACCTCAGCGAGACGCTCGCTCAGCTGCTCGCCTCCCCCGACGTCACCAGCGACCAGGCGGCCGTCATCAGGAGCCTCCTCATGTGACCGATCGC
CDS Sequence
- >LOC_Os04g54900.1
ATGTCGAGCAGCCGGAGGTCGCGCTCACGGCGAGCCGGGAGCTCGGTGCCGTCGTCGTCGTCGTCGTCGAGGACGTCGATCTCGGAGGACCAGATCGCCGAGCTTCTCTCCAAGCTTCAGGCCCTGCTCCCGGAGTCTCAGGCTCGCAATGGCGCCCATAGGGGCTCGGCGGCGAGGGTTTTGCAGGAGACGTGCAGCTACATCAGGAGCCTGCACCAGGAGGTGGACAACCTCAGCGAGACGCTCGCTCAGCTGCTCGCCTCCCCCGACGTCACCAGCGACCAGGCGGCCGTCATCAGGAGCCTCCTCATGTGA
Protein Sequence
- >LOC_Os04g54900.1
MSSSRRSRSRRAGSSVPSSSSSSRTSISEDQIAELLSKLQALLPESQARNGAHRGSAARVLQETCSYIRSLHQEVDNLSETLAQLLASPDVTSDQAAVIRSLLM*