Gene Details:
- MSU gene ID: LOC_Os04g54840
- RAPdb gene ID: Os04g0641000
- Gene Symbol: NRPD2
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Homozygous NRPD2 mutants have neither gametophytic defects nor embryo lethality, although adult plants are dwarf and sterile.
Function-related keywords:
Literature:
- A null allele of the pol IV second subunit impacts stature and reproductive development in Oryza sativa . DOI: 10.1111/tpj.15848 ; PMID: 35635763
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g54840.1
GCCAGAACCCTTCTCCCCCCTCTTCACTCTCCCCGGAAGCATCGCTCGCACGCATCGGACGCCGGAATCCCCGCCTCCGGCGACTAGGGTTTCGCCCTCCGGCGACGCCCCTCCTCTCCACCAGGCTATTCCCTCGAAGTTATGGAAGAGCCATCAAAGGACAATGGGCAATCATCCTGTGTTGTTGATCCTGAGCTGGAACCTATGATGCTGGATGATGCTAGAGAGGGAGTATCCCATACATTGGATGATGCAAATGGGCATTCTTCTATGGATGTTGACAGAGGATGCCATTCTATGGACACCACGAGATCATCTCTGGGTGATGATGGTAAAGGAAAGCGCGACTCATATGCCCAAATTCCAGTCGACATGAGTATTCCAAGCCTAGAAAAGTTCTGCAAAGAAGCATCAAGGTCCTTCTTTGATGAGATTGGTCTGATCAGCCATCAGATAAATTCTTATAACGAGTTTGTCTCACATGGGCTCCAGGAACTTTTTGATTCTCTGGGGGAAGTGACTGTGGAGCCTAGTTATGATCCTTCAAATAGAGGACCAGGTGGCTGGAGACATGCTATCATCAAGTTTGGAAGAGTGCAACTAGAAGAACCAGTATTTTGGTCTCATGGATGTGATATTGATGAACAATCGCTCAAACTGAAGCCAAGGCATGCTCGCCTACAGAATATGACATATTCTTCCAAAATGAAAGTGGAAGTTCATTTCCAGGTTTACTCTATGGAGAAGAGTGACAAGGCTAAAACAGGGAATGATAAATTTGGTTACAAGCGAAACATTATTAATGAAACATATTATATAAATATTGGCCGCCTTCCAGTTATGGTTATGTCAAATTTATGTTGGCTCCACAAACTCAAGGAAAGTGATTGCCAATTTGATTCTGGTGGATACTTTTTGATCAAGGGAATGGAGAAGGTATTCATTGCGCAAGAGCAAAAATGTCTGACCAGGATTTGGGTTGAGGACCGTCCTTGCTGGATGGTCTCTTTCTTGTCTCCAATCAGAAGAAGGCGCATATATATAAAACTAATTGATTCTGCAAATAATGAAGATGCCAGTGGGGGGAAGATCATTTCCATCTCCTTTTTGTATGCAAATATGCCAATATGGTTGATGTTTTTTGCACTAGGCATATCATCAGATAAGGATATCTTTGATGTTATAAATATGGAAGACTGTGATGCTTGTGTTATCAACACAATTACCGCAACTATTAAAGAATCAGATGAATTGTGTGAAGGCTTCCGTAAATCAGATAAAGCCCGGCAGTATGTTGACGAATTGATTAAGAATTCAAAATTTCCTCCTGCAGAGCCATTTGATGATTATATTGCTAAATACCTCTTCCCCAGCATAAGTGGGAACCGGAACAAAGCACTTTTCTTAGGTTACATGGTCAAATGCCTTTTAATGGCTTTCACTGGGAAGCGCAAATGTGACAACAAGGATGATTTCCGGAACAAGAGGTTGGACCTAGCTGGTGAATTGCTTGGAAGAGAACTCCGTGCGCATATTAGGCATGCAGAGAGACTCATGGTTAAGGCCTTGCAGAGAGATTTAAATAGTGAGCGTGAGTTACAAGAATTTGATCATTATCTGGATGCTTCAATTATTACCAATGGTCTAAACCGTGCCTTCTCTACTGGTTCTTGGTGCCATCCTTACAAAAGAAATGAAAGATGCGCAGGAATTGTTGCGACACTAAGGAGAACAAATCCGCTTCAGATGATCTCGGACTTGAGGAAAACTCGCCAACGAGTTGCTTATGCTGGGAAAGCCGGTGATGCAAGATATCCAAATCCATCCTACTGGGGAAAATTGTGTTTTATGTCCACTCCTGATGGTGAAAACTGTGGACTTGTGAAAAATCTAGCTGTTACAGCTACTGTTAGCTCCAGAGTAGCACCGCCATTGATTGACAGGTTCATTTCTTGTGGAATGAATAAGCTGCATGAGATTCCTACAGAGGAGGTTCCTAGAATGGATAAAATCTTCCTGAATGGGGATTGGGTGGGGTCCTGTAGTGACCCGGCTTCATTTGTCTTGCGTTTAAGGTGCATGAGACGCAGTGGTCTGATAGATCCACAGGTTGAGATAAAACGGGACAAGCACCAAAGGGAAGTTCGGGTGTTTTCTGATGCAGGTCGAATCCTCAGACCGCTTCTTGTGGTTGAAAATCTCAATAAAATTAGGAGACCGAAGGGCAGTTCATATTCTTTTCAGTGGTTAATGCAACAAGAAATAATTGAGTTTATTGGCGTTGAAGAAGAGGAAGATATACGAAGTGCCTGGGGCATCAGGAACCTATTTGAGAGTGAAGAAGAGGCTCCCATGGTAAAAATGAATAAAGCAGAGGATGTCTTCAATGTTAAGAGGAAGATCGGAGGGGAGGTTTCAGGTTATACGCACTGTGAGCTGGATCTTTCTTTTCTGCTAGGATTAAGTTGTGGTATTATCCCTTTTGCGAACCACAATTTTGCTCGGAGGGTTCTTTACCAATCTGAAAAACATTCACAGCAAGCTATTGGATACTCTACAACAAATCCGCACATCAGAGTTGATACCCTTTCCCATCAACTTTACTATCCTCAGAGACCCCTTTTCAAAACAGTGATAGCTGACTGCATTGGTAGATCAGAATATACTTTTGGGAGAAAGGATGACTTTGCCAGACCAGAGTATTTCAATGGCCAAAATGCAATAGTGGCAGTGAATGTTCATCAGGGGTTTAATCAAGAAGATTCCCTGGTTATGAATAGGGCTTCTCTTGAGCGGGGTATGTTTAGGACTGAGCACTTCAGGAACTATAAGGCTGAAGTAGAGAACAAAGGTGGGCCAGGTGGCAACAAACGACTAAAAATGAAGGATAAGATTGACTTCGGTAAAATGCAAAGCAAGAGAGGACGTGTTGACAATCTTGACGATGATGGATTACCATATGTCGGTGCAAGTCTTCAGAGTGGTGACATTGTCATTGGAAAGGTCTCAGAATCTGGTGAAGATCATAGTATTAAGCTGAAGCATACTGAAAAGGGTATGGTGCAGAGGGTATTACTTTCAGCTAATGATGAGGGGAAGAACTTTGCAGTTGTTACTCTAAGACAGGTTCGATCACCTTGCCTTGGAGATAAATTTTCCAGCATGCATGGCCAGAAAGGTGTCGTTGGTTTTCTAGAATCTCAGGAGAATTTCCCATTTACTTACCAAGGAATAGTACCAGATATTGTGATAAATCCACATGCATTTCCTACCCGTCAAACTCCAGGCCAGCTTCTTGAAGCTGCTTTGGGGAAAGGAATTGCCCTCGGTGGTACAATGAGATATGCTACACCATTCACAACAGCATCGTTTGATGTGATCACAGACCAATTACACAAGGCTGGATTTTCAAGATGGGGAGCTGAAAGTGTTCTCAATGGCCGGACTGGTGAAAGGATGCACTCATTGATTTTCATGGGTCCTACTTTTTACCAGAGGCTGATACACATGGCAGAAGATAAGGTCAAGTTCAGGAACACGGGGCCAGTGCACCCCCTAACACGGCAACCTGTTGCTGACAGGAAGAGGTTTGGGGGAGTGAAGTTTGGAGAAATGGAGCGTGACTGCCTCCTCGCCCATGGTGCAGCAGCCAACCTCCATGAGCGGCTCTTCATGCTTAGTGACTTCTCGCAGATGCACGTCTGCCAGACGTGCGAACGTGTGGCGAATGTTATCATGAGGCCTGTCCCAGGAGGAAAGAAGATCCGGGGGCCATACTGTGGGTTCTGCCGCTCTTCTGAAAACATAGTAAGGATCAATGTGCCCTACGGCGCAAAGCTGCTCTATCAAGAGCTATTCAGCATGGGGATCTGCCTTAGATTTGAGACGGAAGTCTGCTAGAACTCCACATCTACTATCGACTCACCATGTATATATATCCTCGTTGTCCCTTGGAGATTCTGTTATGGGCATTAGTGTTGTAGCCACATGACTTCTCTTCCGGTTGGACGATGGCATAGCTAGGAGGGGTGAATCTGAAGTCAGGTGAAACCTTTCTTTTGCTATTTATTTGGGTGAAGACTCAATTCCCATCACCTGCCTTTGATGTCCTGTGACCAACCGATGGCATAGTTAGGGATGGGGTGAATCAGAGGTCAACTGAAAACCCTTTTGCTATAGTTCGATGTTTCACCTTGGCACTGTACTATGCATATTTGGATGAAAACTCATTTCCCATCTCCTGCTTTTGCTGTTCTGTGATGAA
CDS Sequence
- >LOC_Os04g54840.1
ATGGAAGAGCCATCAAAGGACAATGGGCAATCATCCTGTGTTGTTGATCCTGAGCTGGAACCTATGATGCTGGATGATGCTAGAGAGGGAGTATCCCATACATTGGATGATGCAAATGGGCATTCTTCTATGGATGTTGACAGAGGATGCCATTCTATGGACACCACGAGATCATCTCTGGGTGATGATGGTAAAGGAAAGCGCGACTCATATGCCCAAATTCCAGTCGACATGAGTATTCCAAGCCTAGAAAAGTTCTGCAAAGAAGCATCAAGGTCCTTCTTTGATGAGATTGGTCTGATCAGCCATCAGATAAATTCTTATAACGAGTTTGTCTCACATGGGCTCCAGGAACTTTTTGATTCTCTGGGGGAAGTGACTGTGGAGCCTAGTTATGATCCTTCAAATAGAGGACCAGGTGGCTGGAGACATGCTATCATCAAGTTTGGAAGAGTGCAACTAGAAGAACCAGTATTTTGGTCTCATGGATGTGATATTGATGAACAATCGCTCAAACTGAAGCCAAGGCATGCTCGCCTACAGAATATGACATATTCTTCCAAAATGAAAGTGGAAGTTCATTTCCAGGTTTACTCTATGGAGAAGAGTGACAAGGCTAAAACAGGGAATGATAAATTTGGTTACAAGCGAAACATTATTAATGAAACATATTATATAAATATTGGCCGCCTTCCAGTTATGGTTATGTCAAATTTATGTTGGCTCCACAAACTCAAGGAAAGTGATTGCCAATTTGATTCTGGTGGATACTTTTTGATCAAGGGAATGGAGAAGGTATTCATTGCGCAAGAGCAAAAATGTCTGACCAGGATTTGGGTTGAGGACCGTCCTTGCTGGATGGTCTCTTTCTTGTCTCCAATCAGAAGAAGGCGCATATATATAAAACTAATTGATTCTGCAAATAATGAAGATGCCAGTGGGGGGAAGATCATTTCCATCTCCTTTTTGTATGCAAATATGCCAATATGGTTGATGTTTTTTGCACTAGGCATATCATCAGATAAGGATATCTTTGATGTTATAAATATGGAAGACTGTGATGCTTGTGTTATCAACACAATTACCGCAACTATTAAAGAATCAGATGAATTGTGTGAAGGCTTCCGTAAATCAGATAAAGCCCGGCAGTATGTTGACGAATTGATTAAGAATTCAAAATTTCCTCCTGCAGAGCCATTTGATGATTATATTGCTAAATACCTCTTCCCCAGCATAAGTGGGAACCGGAACAAAGCACTTTTCTTAGGTTACATGGTCAAATGCCTTTTAATGGCTTTCACTGGGAAGCGCAAATGTGACAACAAGGATGATTTCCGGAACAAGAGGTTGGACCTAGCTGGTGAATTGCTTGGAAGAGAACTCCGTGCGCATATTAGGCATGCAGAGAGACTCATGGTTAAGGCCTTGCAGAGAGATTTAAATAGTGAGCGTGAGTTACAAGAATTTGATCATTATCTGGATGCTTCAATTATTACCAATGGTCTAAACCGTGCCTTCTCTACTGGTTCTTGGTGCCATCCTTACAAAAGAAATGAAAGATGCGCAGGAATTGTTGCGACACTAAGGAGAACAAATCCGCTTCAGATGATCTCGGACTTGAGGAAAACTCGCCAACGAGTTGCTTATGCTGGGAAAGCCGGTGATGCAAGATATCCAAATCCATCCTACTGGGGAAAATTGTGTTTTATGTCCACTCCTGATGGTGAAAACTGTGGACTTGTGAAAAATCTAGCTGTTACAGCTACTGTTAGCTCCAGAGTAGCACCGCCATTGATTGACAGGTTCATTTCTTGTGGAATGAATAAGCTGCATGAGATTCCTACAGAGGAGGTTCCTAGAATGGATAAAATCTTCCTGAATGGGGATTGGGTGGGGTCCTGTAGTGACCCGGCTTCATTTGTCTTGCGTTTAAGGTGCATGAGACGCAGTGGTCTGATAGATCCACAGGTTGAGATAAAACGGGACAAGCACCAAAGGGAAGTTCGGGTGTTTTCTGATGCAGGTCGAATCCTCAGACCGCTTCTTGTGGTTGAAAATCTCAATAAAATTAGGAGACCGAAGGGCAGTTCATATTCTTTTCAGTGGTTAATGCAACAAGAAATAATTGAGTTTATTGGCGTTGAAGAAGAGGAAGATATACGAAGTGCCTGGGGCATCAGGAACCTATTTGAGAGTGAAGAAGAGGCTCCCATGGTAAAAATGAATAAAGCAGAGGATGTCTTCAATGTTAAGAGGAAGATCGGAGGGGAGGTTTCAGGTTATACGCACTGTGAGCTGGATCTTTCTTTTCTGCTAGGATTAAGTTGTGGTATTATCCCTTTTGCGAACCACAATTTTGCTCGGAGGGTTCTTTACCAATCTGAAAAACATTCACAGCAAGCTATTGGATACTCTACAACAAATCCGCACATCAGAGTTGATACCCTTTCCCATCAACTTTACTATCCTCAGAGACCCCTTTTCAAAACAGTGATAGCTGACTGCATTGGTAGATCAGAATATACTTTTGGGAGAAAGGATGACTTTGCCAGACCAGAGTATTTCAATGGCCAAAATGCAATAGTGGCAGTGAATGTTCATCAGGGGTTTAATCAAGAAGATTCCCTGGTTATGAATAGGGCTTCTCTTGAGCGGGGTATGTTTAGGACTGAGCACTTCAGGAACTATAAGGCTGAAGTAGAGAACAAAGGTGGGCCAGGTGGCAACAAACGACTAAAAATGAAGGATAAGATTGACTTCGGTAAAATGCAAAGCAAGAGAGGACGTGTTGACAATCTTGACGATGATGGATTACCATATGTCGGTGCAAGTCTTCAGAGTGGTGACATTGTCATTGGAAAGGTCTCAGAATCTGGTGAAGATCATAGTATTAAGCTGAAGCATACTGAAAAGGGTATGGTGCAGAGGGTATTACTTTCAGCTAATGATGAGGGGAAGAACTTTGCAGTTGTTACTCTAAGACAGGTTCGATCACCTTGCCTTGGAGATAAATTTTCCAGCATGCATGGCCAGAAAGGTGTCGTTGGTTTTCTAGAATCTCAGGAGAATTTCCCATTTACTTACCAAGGAATAGTACCAGATATTGTGATAAATCCACATGCATTTCCTACCCGTCAAACTCCAGGCCAGCTTCTTGAAGCTGCTTTGGGGAAAGGAATTGCCCTCGGTGGTACAATGAGATATGCTACACCATTCACAACAGCATCGTTTGATGTGATCACAGACCAATTACACAAGGCTGGATTTTCAAGATGGGGAGCTGAAAGTGTTCTCAATGGCCGGACTGGTGAAAGGATGCACTCATTGATTTTCATGGGTCCTACTTTTTACCAGAGGCTGATACACATGGCAGAAGATAAGGTCAAGTTCAGGAACACGGGGCCAGTGCACCCCCTAACACGGCAACCTGTTGCTGACAGGAAGAGGTTTGGGGGAGTGAAGTTTGGAGAAATGGAGCGTGACTGCCTCCTCGCCCATGGTGCAGCAGCCAACCTCCATGAGCGGCTCTTCATGCTTAGTGACTTCTCGCAGATGCACGTCTGCCAGACGTGCGAACGTGTGGCGAATGTTATCATGAGGCCTGTCCCAGGAGGAAAGAAGATCCGGGGGCCATACTGTGGGTTCTGCCGCTCTTCTGAAAACATAGTAAGGATCAATGTGCCCTACGGCGCAAAGCTGCTCTATCAAGAGCTATTCAGCATGGGGATCTGCCTTAGATTTGAGACGGAAGTCTGCTAG
Protein Sequence
- >LOC_Os04g54840.1
MEEPSKDNGQSSCVVDPELEPMMLDDAREGVSHTLDDANGHSSMDVDRGCHSMDTTRSSLGDDGKGKRDSYAQIPVDMSIPSLEKFCKEASRSFFDEIGLISHQINSYNEFVSHGLQELFDSLGEVTVEPSYDPSNRGPGGWRHAIIKFGRVQLEEPVFWSHGCDIDEQSLKLKPRHARLQNMTYSSKMKVEVHFQVYSMEKSDKAKTGNDKFGYKRNIINETYYINIGRLPVMVMSNLCWLHKLKESDCQFDSGGYFLIKGMEKVFIAQEQKCLTRIWVEDRPCWMVSFLSPIRRRRIYIKLIDSANNEDASGGKIISISFLYANMPIWLMFFALGISSDKDIFDVINMEDCDACVINTITATIKESDELCEGFRKSDKARQYVDELIKNSKFPPAEPFDDYIAKYLFPSISGNRNKALFLGYMVKCLLMAFTGKRKCDNKDDFRNKRLDLAGELLGRELRAHIRHAERLMVKALQRDLNSERELQEFDHYLDASIITNGLNRAFSTGSWCHPYKRNERCAGIVATLRRTNPLQMISDLRKTRQRVAYAGKAGDARYPNPSYWGKLCFMSTPDGENCGLVKNLAVTATVSSRVAPPLIDRFISCGMNKLHEIPTEEVPRMDKIFLNGDWVGSCSDPASFVLRLRCMRRSGLIDPQVEIKRDKHQREVRVFSDAGRILRPLLVVENLNKIRRPKGSSYSFQWLMQQEIIEFIGVEEEEDIRSAWGIRNLFESEEEAPMVKMNKAEDVFNVKRKIGGEVSGYTHCELDLSFLLGLSCGIIPFANHNFARRVLYQSEKHSQQAIGYSTTNPHIRVDTLSHQLYYPQRPLFKTVIADCIGRSEYTFGRKDDFARPEYFNGQNAIVAVNVHQGFNQEDSLVMNRASLERGMFRTEHFRNYKAEVENKGGPGGNKRLKMKDKIDFGKMQSKRGRVDNLDDDGLPYVGASLQSGDIVIGKVSESGEDHSIKLKHTEKGMVQRVLLSANDEGKNFAVVTLRQVRSPCLGDKFSSMHGQKGVVGFLESQENFPFTYQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIALGGTMRYATPFTTASFDVITDQLHKAGFSRWGAESVLNGRTGERMHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGAAANLHERLFMLSDFSQMHVCQTCERVANVIMRPVPGGKKIRGPYCGFCRSSENIVRINVPYGAKLLYQELFSMGICLRFETEVC*