Gene Details:
- MSU gene ID: LOC_Os04g53310
- RAPdb gene ID: Os04g0624600
- Gene Symbol: OsSSIIIb
- Genome: MSU7 , IRGSP-1.0
- Species: Oryza sativa
Functional Descriptions:
- Creating high-resistant starch rice by simultaneous editing of SS3a and SS3b.
Function-related keywords:
Literature:
- Creating high-resistant starch rice by simultaneous editing of SS3a and SS3b . DOI: 10.1111/pbi.14053 ; PMID: 37128176
- Loss of function of SSIIIa and SSIIIb coordinately confers high RS content in cooked rice . DOI: 10.1073/pnas.2220622120 ; PMID: 37126676
Related News:
Gene Resources:
Sequences:
cDNA Sequence
- >LOC_Os04g53310.1
AGAAAATAAAAAAGAAAAAGATCGCGAAAATTTCACGGGAAAGCACGGGAGCCTTTCTTTCTCCTTCGATCGAGCGTGCGCGCGTGTGTGTGTCTGCGGACAGCACACAGCTGCGCATTTCGATGCGAGTTTTTGGAAACCAGAAAAGAAAAAGAAGGGAAGGGAGTCAGCTCTGAGGAGGGAGAGGGAGAGGGAGGGAGGAGGAGGGGATCAGGGGGAGAGGAGGGAGGTTTTGGCGCTGGCAATGGAGATGGCGCATAGCCCGCTCTGCTCCCGGAGCCGGCCGGTGCTCGTCGTCCGCCCGGCGACGGCCGCCACTGGCTTCGCGCAGCCGATCATAAGGTGCAGGAGATTTACAAGGACAAGGCTTCTCCGATGCTTGGTGGCAAGTGCAGATTATTCTAAGAGAAACCCAAGGAGAGCCTCCACTCCGAAACCTAAAGGTGCTGCCTCTAGAACATATGCTCCGAGACCTACTGTTGAATCCAGCATGAAGAAGATTGGACAAAGCGGCACAGATGAAGGTGATCTTGGCACAAGCAATGGGAAGCTCAGTAGTGAAGCAACAGAGCAAACTAGTAATGTAGAAGAATCATCGGAGGTGGACTTCTCTGGAAATGTATCGAGCAGTGTATTCTTGGAGGGAATGGATGATGCTTTTGAAGCTGAGACTGAAGAAGAGGTCGAGCAAAATCAGTCTCCAGAACTGTCTTCTGAATCTATGGATGATGATGCAATTGACAGAAAACTTGATGAATACCGTGGTAAAATAAGTGCACTAATAAGTTCGAAACCTGAACCTACATCAGTTTCTAGCACTCATGTACAGGACAGATCAATTGTTGGTTTTCATGAACAAGAAAAATCTGTAGTTAGTTTCCATGAGCAAGATAGATCAATTGTCTCTGTTCCCGAACAAAGCCAGCCAAGTAGTGGTGTCAGTGGACAAAATCCAACAGAAGAGAAAACCATTATTAGTGGACAAGATGTCACCGAAGAAGCACCAGAAGAGATAACTGGCAAGAGTATTGAGAGGGAACCATTAAGTAGAGAAACTGAGAAAGTTCTGTTTGCTGATGATGACCCTAGGATAATCAAGGATGAACAGTATGAACCTGATATAGCACCAGTACAGGATGATGTGGATCCACAAGTGCTCAGGAGGCGGCTTGAAGAGCTTGCTGAGAAAAATTATTTGGCTGGGAATAAGTGTTTTGTTTTTCCTGAAGTAGTACAGGCGGATTCGGTCATTGATCTTTACTTGAACCATAGCATGTCAGCCTTAGCCAGTGAGCCTGATATTCTTATCAAAGGGGCATTCAATGGTTGGAGATGGAAAAAATTTACCCAAAAAATGCATAAAAGTGAGTTAACAGGGGATTGGTGGTGCTGCAAACTCCATATACCCAAGCAGGCTTACAGATTAGATTTTGTATTCTTTAATGGTGACACCATCTACGAAAATAACAATCATAATGATTTCGTCCTACAAATAGAAAGCGAAATCAATGAACACTCATTTGAGGACTTCTTGGTTGAAGAAAAACAAAGAGAGCTTGAAAGGCTTGCTGCAGAAGAAGCTGAAAGGAAAAGACAGGCTGAGGAGGAGCGTCGTAAGGAGGAAGAAAGGGCTGCAATGGAGGCTGACAGGGCACAAGCAAAGGCTGAAGTCGAGATGAACAAGAATAAGTTGCAAAATTTATTAAATTCAGCCAGCAGATATGCTGATAATCTATGGTATATAGAGCCTCACACATACAAAGCAGGGGATAGGGTCAAATTGTTCTACAACAGAAGCTCAAGACCGCTAATGCATAACACTGAGATTTGGATGCATGGCGGTTACAATAATTGGAGTGATGGGCTCTCTATTGCTGAAAAATTAATCAAATCATATGAAAAGGATGGTGATTGGTGGTATGCAGATGTTACTCTACCTGAAGGGGCATTGGTGTTAGACTGGGTTTTTGCTGATGGGCCACCTGGGAATGCAAGGAATTATGATAACAATGGACGCCAGGATTTCCATGCTGTTGTTCCAAATAACATATCTGAGGACCTGTTTTGGGTGGAAGAAGAGCACATGATATTTAAAAGGCTTCAGAAAGAAAGGAAAGAAAGGGAGGATGCTGATCGAAGAAAGTCTGAGATAACTGCAAAAATGAAAGCTGAGATGAAGGAAAAGACTATGAGAGACTTTCTTCTCTCGCAGAAACACATTGTGTACACTGAGCCTCTCGAAGTACGTGCAGGAACCACCGTGGATGTTCTATACAATCCGTCTAACACGGTGCTGAACGGAAAGCCAGAGGTTTGGTTCAGATGTTCCTTTAATCGTTGGACTCATCCAAGTGGTCCTTTGCCGCCACAGAAGATGGTGAATGCGGAGAATGGTTCACACTTAAGAGCAACAGTTAGGGTTCCTTTGGATGCATATATGATGGACTTTGTTTTCTCTGAGTCGGAAGAAGGTGGAATATATGACAACAGGAATGGCATGGACTATCATAGTCCTGTGACTGATTCCGTTGCAAAAGAACCTCCTATGCATATTGTGCACATTGCAGTAGAAATGGCTCCTATTGCAAAGGTTGGGGGTCTTGGTGATGTTGTTACAAGTCTTTCACGAGCCGTTCAAGATTTAGGCCACAATGTTGAGGTTATTCTTCCCAAGTATGACTGTTTAAACCTAAGCAATGTGAAAGATTTACATTACCGTCAAAGTTTTACTTGGGGTAATACAGAGATAAAAGTATGGTTTGGAAAAGTTGAAGACGTCCCTGTTTACTTCTTGGAACCACAGAATGGGATGTTTTGGGTTGGATGTGTCTATGGAAGAAATGACGAGAGTAGATTTGGCTTCTTCTGCCATTCTGCTCTAGAGTTTCTCCGCCAAAATGGATCTTCTCCTGATATTATACATTGTCATGATTGGTCAAGTGCTCCAGTTGCTTGGCTATTCAAGGAACAATATGCTCAAAATGGACTGTCAAATGGGCGGGTTGTATTTACCATCCACAACCTTGAATTTGGTGCACATCACATCGGCAAAGCAATGGCACGTTGTGATAAGGCTACAACTGTTTCATATACGTATTCAAGGGAAGTGTCAGGACATGGTGCTATTGCCCCTCACTTTTCCAAATTCCACGGTATTCGTAACGGAATTGATCCAGATATTTGGGATCCATACAGTGACAATTTTATCCCGGTCCACTATACCTCTGAGAATGTTGTTGAGGGCAAGAGTGCTGCCAAAAAGGCATTGCAACAGAGGCTTGGACTACAGCAAACTGATACCCCTGTTGTTGGAATTATCAGTCGTCTGACAGTCCAGAAGGGAATTCACCTTATCAAACATGCAATTTATCGAACTCTTGAACGCAATGGGCAGGTGGTTTTACTAGGCTCAGCTCCAGATCATCGCATACAAGGTGACTTTACCAACTTAGCTAGTAAACTGCATGGCGAATACCATGGTCGTGTAAAGCTTTGTTTAACCTATGATGAGCCACTATCTCATTTGATTTATGCTGGTGCCGACTTCATCCTTGTTCCTTCCATGTTTGAACCTTGTGGTTTAACCCAGCTTACTGCTATGCGTTATGGATCTATCCCAATAGTTCGGAAAACTGGAGGCCTTTATGACACCGTTTTTGACGTCGACGATGATAAGGATCGAGCTCGAGAACAAGGTCTTGAGCCAAACGGGTTCAGTTTCGAAGGAGCTGACAGCAACGGTGTGGATTACGCCCTTGACAGAGCGATCACCACATGGTATGATGCTCGCGATTGGTTCCACTCCCTCTGCAAGAGGGTGATGGAGCAAGATTGGACATGGAACCGACCTGCTCTGGACTATATGGAATTGTACCATTCCGCTCGCAAGAACTGAGACCTTTCTAGCCCCAAGAACACATGGATTTTGGGAAGTAGGTTTCCCCAGGTTTCTGGGACATGCCGGCATCCCAGTACATACCCTTTCTCTGGGTACCATTCTTTAGACAGAAAGAAAATGAGGAGAATCCAATCCCGGCTTCTACATTGATCTCCAGCGTCAGTAAGAGATCAATTAATCTTTCCGTTATCCTGCGGTTGTGAGTTCGCCATCGTACGGCGCCCGTGCGTATGTGACATGCAGGAAGCTCATCGTGCTTAAAGCCAGTTTTGCAAACATGTACCATGCAAATATGTTCCATTTTACGATTCTGCAGTGTTTCGGATGTACATATGTAAGGCAGATTAGATTTGTAGGGCGGATGTTCTCTCTGGTTTATTTTCTGCTCACTCGGAGAAGGAATGAAGTGCGAGCAGAATGGCATGTGACGGCCTGTGTAGCTTTTTAATTTCTCGTGCTGACATCTCAAAATTGATTTCAAATTGGCAGCGTGAACCAAACCATCAATTGAATACTCTAAAAGTTTCAAAGTTTTTAAGCCAATATCATCCATGCTCATTATATTACTGGCATTATTTTGTATACAATCATTAGTCACACACATATCAAACACAAATCCGTCTCTCCATCTGGGTTCACATGTATAGATGATAAATATACGTCCACGGTTCACGTTGTGCTTCACTTAGCGTAGCCGATGCTGACGCCGGCGACGGTGACCGAATCGCAGCCACACCTCGGCACGATCGACACGACGATCGTCTTGTCGCCGTCGGCGCCGATGTCGTCCAGCAAGTCGCATATGCCGAACCTCGCCTCCGTCTTCCTCGGCGACAGCTGCCCCTCGCGGTGGATCCCGTGCGGCGCCAGCGCGACGCTGCCGGCGCACGTCGCCGCGCACGTCGCCGCGCCGTCCCCGCTCTCGGGCGCGTTCACGAACACGTCGAACTTGACGTACGTGGAGTGGTCGGGGATCTCGACCTCCTCCTCCTCCTCCTTCTCCTCGCGGCTCCTCGACGCCCTGGGCCTCGTCACGGCCACCCGCACGGTCTTGTCCAGGGTCGCCGGGAACGCGCCGGCCGCGGGCGCCGGCGTGCTGGCTGCTCCCGTGGACGGCTTGGCGTTCAGCCACGGGAGACCCACGTCCTGGTACGTGAAGCGCAGCGCCGACGGGTCGAGGGTGTCG
CDS Sequence
- >LOC_Os04g53310.1
ATGGAGATGGCGCATAGCCCGCTCTGCTCCCGGAGCCGGCCGGTGCTCGTCGTCCGCCCGGCGACGGCCGCCACTGGCTTCGCGCAGCCGATCATAAGGTGCAGGAGATTTACAAGGACAAGGCTTCTCCGATGCTTGGTGGCAAGTGCAGATTATTCTAAGAGAAACCCAAGGAGAGCCTCCACTCCGAAACCTAAAGGTGCTGCCTCTAGAACATATGCTCCGAGACCTACTGTTGAATCCAGCATGAAGAAGATTGGACAAAGCGGCACAGATGAAGGTGATCTTGGCACAAGCAATGGGAAGCTCAGTAGTGAAGCAACAGAGCAAACTAGTAATGTAGAAGAATCATCGGAGGTGGACTTCTCTGGAAATGTATCGAGCAGTGTATTCTTGGAGGGAATGGATGATGCTTTTGAAGCTGAGACTGAAGAAGAGGTCGAGCAAAATCAGTCTCCAGAACTGTCTTCTGAATCTATGGATGATGATGCAATTGACAGAAAACTTGATGAATACCGTGGTAAAATAAGTGCACTAATAAGTTCGAAACCTGAACCTACATCAGTTTCTAGCACTCATGTACAGGACAGATCAATTGTTGGTTTTCATGAACAAGAAAAATCTGTAGTTAGTTTCCATGAGCAAGATAGATCAATTGTCTCTGTTCCCGAACAAAGCCAGCCAAGTAGTGGTGTCAGTGGACAAAATCCAACAGAAGAGAAAACCATTATTAGTGGACAAGATGTCACCGAAGAAGCACCAGAAGAGATAACTGGCAAGAGTATTGAGAGGGAACCATTAAGTAGAGAAACTGAGAAAGTTCTGTTTGCTGATGATGACCCTAGGATAATCAAGGATGAACAGTATGAACCTGATATAGCACCAGTACAGGATGATGTGGATCCACAAGTGCTCAGGAGGCGGCTTGAAGAGCTTGCTGAGAAAAATTATTTGGCTGGGAATAAGTGTTTTGTTTTTCCTGAAGTAGTACAGGCGGATTCGGTCATTGATCTTTACTTGAACCATAGCATGTCAGCCTTAGCCAGTGAGCCTGATATTCTTATCAAAGGGGCATTCAATGGTTGGAGATGGAAAAAATTTACCCAAAAAATGCATAAAAGTGAGTTAACAGGGGATTGGTGGTGCTGCAAACTCCATATACCCAAGCAGGCTTACAGATTAGATTTTGTATTCTTTAATGGTGACACCATCTACGAAAATAACAATCATAATGATTTCGTCCTACAAATAGAAAGCGAAATCAATGAACACTCATTTGAGGACTTCTTGGTTGAAGAAAAACAAAGAGAGCTTGAAAGGCTTGCTGCAGAAGAAGCTGAAAGGAAAAGACAGGCTGAGGAGGAGCGTCGTAAGGAGGAAGAAAGGGCTGCAATGGAGGCTGACAGGGCACAAGCAAAGGCTGAAGTCGAGATGAACAAGAATAAGTTGCAAAATTTATTAAATTCAGCCAGCAGATATGCTGATAATCTATGGTATATAGAGCCTCACACATACAAAGCAGGGGATAGGGTCAAATTGTTCTACAACAGAAGCTCAAGACCGCTAATGCATAACACTGAGATTTGGATGCATGGCGGTTACAATAATTGGAGTGATGGGCTCTCTATTGCTGAAAAATTAATCAAATCATATGAAAAGGATGGTGATTGGTGGTATGCAGATGTTACTCTACCTGAAGGGGCATTGGTGTTAGACTGGGTTTTTGCTGATGGGCCACCTGGGAATGCAAGGAATTATGATAACAATGGACGCCAGGATTTCCATGCTGTTGTTCCAAATAACATATCTGAGGACCTGTTTTGGGTGGAAGAAGAGCACATGATATTTAAAAGGCTTCAGAAAGAAAGGAAAGAAAGGGAGGATGCTGATCGAAGAAAGTCTGAGATAACTGCAAAAATGAAAGCTGAGATGAAGGAAAAGACTATGAGAGACTTTCTTCTCTCGCAGAAACACATTGTGTACACTGAGCCTCTCGAAGTACGTGCAGGAACCACCGTGGATGTTCTATACAATCCGTCTAACACGGTGCTGAACGGAAAGCCAGAGGTTTGGTTCAGATGTTCCTTTAATCGTTGGACTCATCCAAGTGGTCCTTTGCCGCCACAGAAGATGGTGAATGCGGAGAATGGTTCACACTTAAGAGCAACAGTTAGGGTTCCTTTGGATGCATATATGATGGACTTTGTTTTCTCTGAGTCGGAAGAAGGTGGAATATATGACAACAGGAATGGCATGGACTATCATAGTCCTGTGACTGATTCCGTTGCAAAAGAACCTCCTATGCATATTGTGCACATTGCAGTAGAAATGGCTCCTATTGCAAAGGTTGGGGGTCTTGGTGATGTTGTTACAAGTCTTTCACGAGCCGTTCAAGATTTAGGCCACAATGTTGAGGTTATTCTTCCCAAGTATGACTGTTTAAACCTAAGCAATGTGAAAGATTTACATTACCGTCAAAGTTTTACTTGGGGTAATACAGAGATAAAAGTATGGTTTGGAAAAGTTGAAGACGTCCCTGTTTACTTCTTGGAACCACAGAATGGGATGTTTTGGGTTGGATGTGTCTATGGAAGAAATGACGAGAGTAGATTTGGCTTCTTCTGCCATTCTGCTCTAGAGTTTCTCCGCCAAAATGGATCTTCTCCTGATATTATACATTGTCATGATTGGTCAAGTGCTCCAGTTGCTTGGCTATTCAAGGAACAATATGCTCAAAATGGACTGTCAAATGGGCGGGTTGTATTTACCATCCACAACCTTGAATTTGGTGCACATCACATCGGCAAAGCAATGGCACGTTGTGATAAGGCTACAACTGTTTCATATACGTATTCAAGGGAAGTGTCAGGACATGGTGCTATTGCCCCTCACTTTTCCAAATTCCACGGTATTCGTAACGGAATTGATCCAGATATTTGGGATCCATACAGTGACAATTTTATCCCGGTCCACTATACCTCTGAGAATGTTGTTGAGGGCAAGAGTGCTGCCAAAAAGGCATTGCAACAGAGGCTTGGACTACAGCAAACTGATACCCCTGTTGTTGGAATTATCAGTCGTCTGACAGTCCAGAAGGGAATTCACCTTATCAAACATGCAATTTATCGAACTCTTGAACGCAATGGGCAGGTGGTTTTACTAGGCTCAGCTCCAGATCATCGCATACAAGGTGACTTTACCAACTTAGCTAGTAAACTGCATGGCGAATACCATGGTCGTGTAAAGCTTTGTTTAACCTATGATGAGCCACTATCTCATTTGATTTATGCTGGTGCCGACTTCATCCTTGTTCCTTCCATGTTTGAACCTTGTGGTTTAACCCAGCTTACTGCTATGCGTTATGGATCTATCCCAATAGTTCGGAAAACTGGAGGCCTTTATGACACCGTTTTTGACGTCGACGATGATAAGGATCGAGCTCGAGAACAAGGTCTTGAGCCAAACGGGTTCAGTTTCGAAGGAGCTGACAGCAACGGTGTGGATTACGCCCTTGACAGAGCGATCACCACATGGTATGATGCTCGCGATTGGTTCCACTCCCTCTGCAAGAGGGTGATGGAGCAAGATTGGACATGGAACCGACCTGCTCTGGACTATATGGAATTGTACCATTCCGCTCGCAAGAACTGA
Protein Sequence
- >LOC_Os04g53310.1
MEMAHSPLCSRSRPVLVVRPATAATGFAQPIIRCRRFTRTRLLRCLVASADYSKRNPRRASTPKPKGAASRTYAPRPTVESSMKKIGQSGTDEGDLGTSNGKLSSEATEQTSNVEESSEVDFSGNVSSSVFLEGMDDAFEAETEEEVEQNQSPELSSESMDDDAIDRKLDEYRGKISALISSKPEPTSVSSTHVQDRSIVGFHEQEKSVVSFHEQDRSIVSVPEQSQPSSGVSGQNPTEEKTIISGQDVTEEAPEEITGKSIEREPLSRETEKVLFADDDPRIIKDEQYEPDIAPVQDDVDPQVLRRRLEELAEKNYLAGNKCFVFPEVVQADSVIDLYLNHSMSALASEPDILIKGAFNGWRWKKFTQKMHKSELTGDWWCCKLHIPKQAYRLDFVFFNGDTIYENNNHNDFVLQIESEINEHSFEDFLVEEKQRELERLAAEEAERKRQAEEERRKEEERAAMEADRAQAKAEVEMNKNKLQNLLNSASRYADNLWYIEPHTYKAGDRVKLFYNRSSRPLMHNTEIWMHGGYNNWSDGLSIAEKLIKSYEKDGDWWYADVTLPEGALVLDWVFADGPPGNARNYDNNGRQDFHAVVPNNISEDLFWVEEEHMIFKRLQKERKEREDADRRKSEITAKMKAEMKEKTMRDFLLSQKHIVYTEPLEVRAGTTVDVLYNPSNTVLNGKPEVWFRCSFNRWTHPSGPLPPQKMVNAENGSHLRATVRVPLDAYMMDFVFSESEEGGIYDNRNGMDYHSPVTDSVAKEPPMHIVHIAVEMAPIAKVGGLGDVVTSLSRAVQDLGHNVEVILPKYDCLNLSNVKDLHYRQSFTWGNTEIKVWFGKVEDVPVYFLEPQNGMFWVGCVYGRNDESRFGFFCHSALEFLRQNGSSPDIIHCHDWSSAPVAWLFKEQYAQNGLSNGRVVFTIHNLEFGAHHIGKAMARCDKATTVSYTYSREVSGHGAIAPHFSKFHGIRNGIDPDIWDPYSDNFIPVHYTSENVVEGKSAAKKALQQRLGLQQTDTPVVGIISRLTVQKGIHLIKHAIYRTLERNGQVVLLGSAPDHRIQGDFTNLASKLHGEYHGRVKLCLTYDEPLSHLIYAGADFILVPSMFEPCGLTQLTAMRYGSIPIVRKTGGLYDTVFDVDDDKDRAREQGLEPNGFSFEGADSNGVDYALDRAITTWYDARDWFHSLCKRVMEQDWTWNRPALDYMELYHSARKN*