Information report for OsNUC1
Gene Details
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Functional Descriptions
- ) nucleolin gene, OsNUC1, transcripts were expressed in rice leaves, flowers, seeds and roots but differentially expressed within and between two pairs of salt-sensitive and salt-resistant rice lines when subjected to salt stress.
- Salt-resistant lines exhibited higher OsNUC1 transcript expression levels than salt-sensitive lines during 0.
- Without salt stress, OsNUC1-L expressing Arabidopsis thaliana Atnuc1-L1 plants displayed a substantial but incomplete revertant phenotype, whereas OsNUC1-S expression only induced a weak effect.
- We propose that OsNUC1-S plays an important role in salt resistance during salt stress, a new role for nucleolin in plants.
- Overexpression of a partial fragment of the salt-responsive gene OsNUC1 enhances salt adaptation in transgenic Arabidopsis thaliana and rice (Oryza sativa L.) during salt stress.
- Two of these genes, OsNUC1 and OsRAD23 emerged as top candidate genes with splice variants that exhibited significant divergence between the variants for shoot growth under salt stress conditions.
Literature and News
- Overexpression of a partial fragment of the salt-responsive gene OsNUC1 enhances salt adaptation in transgenic Arabidopsis thaliana and rice (Oryza sativa L.) during salt stress . DOI: 10.1016/j.plantsci.2013.08.013 ; PMID: 24157209
- Rice Overexpressing OsNUC1-S Reveals Differential Gene Expression Leading to Yield Loss Reduction after Salt Stress at the Booting Stage . DOI: 10.3390/ijms19123936 ; PMID: 30544581
- Genome-wide discovery of natural variation in pre-mRNA splicing and prioritising causal alternative splicing to salt stress response in rice . DOI: 10.1111/nph.17189 ; PMID: 33453070
Gene Resources
- UniProt: Q7XTT4
- EMBL: AK103446, AL662970, AP008210
- AlphaFoldDB: Q7XTT4
- EnsemblPlants: Os04t0620700-01
- Gramene: Os04t0620700-01
- KEGG: dosa:Os04g0620700
- Orthologous matrix: DIHQIRN
- InterPro: IPR000504, IPR012677, IPR034350
- PANTHER: PTHR23236, PTHR23236:SF119
- SUPFAM: SSF54928
- PROSITE: PS50102
- Gene3D: 3.30.70.330
- OrthoDB: Q7XTT4
- SWISS-MODEL: Q7XTT4
- Conserved Domain Database: cd12451
- eggNOG: KOG4210
Sequences
cDNA Sequence
- >LOC_Os04g52960.1
ATTACCTCCCCGCCCGCGCACCTCGAGCCCCCAGGTCCGCCTCGCCTCTCCGTCGCTTGCCGCCGCCCGCAGTGGTCGCCGGCCGCGCGGGGCTTCGCCGGTGTCGCTTCCTCGTTTGGAATTAATTAAGCAATACTTAATATGGGCAAGTCAAGCAAGAAATCTGCTGTTGAAGTTGCACCTACCTCTGTCTCAGTCTCAGAGGGGAAATCTGGGAAGAAGGGAAAGAGAAATGCAGAAGATGAGATTGAGAAAGCTGTGAGTGCCAAGAAACAAAAGACTGTACGTGAGAAGGTTGTGCCCTCAAAGGAGGAAGCCAAAAAAGTGAAGAAGCAGCCCCCACCGAAGAAGGTTGAGAGCAGCAGTTCTGAGGAGGATTCTTCAGAATCTGAAGAGGAGGTAAAGGCCCAACCAAAGAAGACTGTCCAACCGAAGAAGGCTGCACAACCTGCTAAAGAGGAGTCAAGTGATGATAGCAGTGATGATAGCTCCTCAGATGATGAGCCTGCAAAAAAACCTGTTGCTCGTCCAAATAAGGCTGCACTTTCTACCAACAGTAGCAGCAGTGATGATAGCAGTGATGAGAGTTTATCAGATGATGAACCTGTGAAAAAGCCTGCTGCCCCTTTGAAGAAGCCAGTTGCACTTGCTACCAATGGATCAAAAAAGGTTGAGACAGACAGCAGCAGCTCTGATAGCAGCTCTGATGAGGAGTCTGATGAGGATGATAAAAAAACTGCTGCTCCAGTGAAGAAACCTTCAGTTGCTGCTATACAAAAGAAGACCCAGGAGTCTGACAGTTCTGATAGTGACTCTGATTCTGAATCAGATGAGGATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGTGAAAGCTCTGATTCTGAAAGTGATTCAGACTCTGATGATGAGGCTGCTGCTGTTAAAAAGGAAGAAGAATCCAGTGATAGCTCAGACAGTGACTCTGAATCTGAGTCTGATTCTGATGAACCAGCAAAACCTACTATTCCTGCAAAAAGGCCACTGACAAAAGACACAAAGAAGGGACAATCCAAGGATGAATCTGAAGATAGTTCTGATGAGAGTTCTGAGGAAAGTGGTGATGAACCTCCGCAAAAGAAGATTAAGGATTCTACAACTTCTGGTACTACCAAGCCTTCCCCTAAGGCTACCAAGAAAGAAATCAGCAGTGATGACGAAAGTGATGAAGATGACAGTTCTGATGAAAGCTCTGATGAGGATGTTAAGCAAAAACAAACTCAAGCTAAGAAGCAAGCACCAGTAGCACAAGAGAGTAGCAGCTCCGATGAATCTTCTGAAGAAGATAGTGACATGGAAAGTGATGAACCAGCAAAAACTCCCCAAAAGAAGGAAACTGCTGTGTCTGTTGGTTCGAATAAGTCTGCGACAAAACCGGGACAAGAGGAACCAAAAACGCCTGCCAGCAACCAAAATCAAGCTACCGGGTCAAAGACTCTTTTTGTTGGAAATTTACCATACAATGTGGAGCAAGAACAAGTGAAGCAATTTTTCCAGGAGGCAGGTGAAGTTGTTGATATTCGTTTCAGTACCTTTGAAGATGGGAACTTCAGGGGCTTTGGACATGTTGAATTTGCCACAGCGGAAGCTGCTAAGAAGGCACTTGAACTTGCTGGTCATGACCTGATGGGACGGCCGGTCAGGCTTGACCTGGCTCGTGAGAGAGGCGCGTATACTCCTGGCAGCGGGAGGGACAATAGTTCTTTCAAGAAGCCTGCTCAAAGCTCAGGAAACACTATATTTATTAAAGGCTTTGATACTTCTCTTGACATACACCAGATCCGGAATTCACTTGAAGAACATTTTGGCTCGTGTGGAGAGATTACACGGGTTTCAATTCCAAAGGATTATGAAACCGGTGCAAGCAAAGGGATGGCGTACATGGATTTTGCGGACAACGGTTCCTTGTCGAAAGCATACGAACTGAATGGATCTGACCTCGGTGGATACAGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGCTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAGACGTGGTGGACGTGGTGATGGTAGCCGTGGGCGCGGTGACCGTGGACGTGGTAGAGGCTTTGGTAGGGGTGACAGGGGCCATGGTGGACGGGGTACACCGTTCAAGCAGAGCGCTGGTACACCTAGTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAGACGAACAATTTGAGCCGATTTTGTTCTAGTACTGTAGTAATCTCCATCCCCCCTAATATATGCGATTCTAGTGAGCCGTGAATTGGCTACCTCCGGACTGTTACATTCTAGCCGTGTTATGTACTTTGTTGGCAGTTGGGACCGTGTTGGTAAATTTGCCCGACAGATTTGGCAATTTTGGAACCTCTTGACTTCGTAATCATTCTTATCATAATATAGTGCTTTGTGGCTTAATGGCACTGTTAACTGCTTCCGAAACTTAAAAGTTCC
CDS Sequence
- >LOC_Os04g52960.1
ATGGGCAAGTCAAGCAAGAAATCTGCTGTTGAAGTTGCACCTACCTCTGTCTCAGTCTCAGAGGGGAAATCTGGGAAGAAGGGAAAGAGAAATGCAGAAGATGAGATTGAGAAAGCTGTGAGTGCCAAGAAACAAAAGACTGTACGTGAGAAGGTTGTGCCCTCAAAGGAGGAAGCCAAAAAAGTGAAGAAGCAGCCCCCACCGAAGAAGGTTGAGAGCAGCAGTTCTGAGGAGGATTCTTCAGAATCTGAAGAGGAGGTAAAGGCCCAACCAAAGAAGACTGTCCAACCGAAGAAGGCTGCACAACCTGCTAAAGAGGAGTCAAGTGATGATAGCAGTGATGATAGCTCCTCAGATGATGAGCCTGCAAAAAAACCTGTTGCTCGTCCAAATAAGGCTGCACTTTCTACCAACAGTAGCAGCAGTGATGATAGCAGTGATGAGAGTTTATCAGATGATGAACCTGTGAAAAAGCCTGCTGCCCCTTTGAAGAAGCCAGTTGCACTTGCTACCAATGGATCAAAAAAGGTTGAGACAGACAGCAGCAGCTCTGATAGCAGCTCTGATGAGGAGTCTGATGAGGATGATAAAAAAACTGCTGCTCCAGTGAAGAAACCTTCAGTTGCTGCTATACAAAAGAAGACCCAGGAGTCTGACAGTTCTGATAGTGACTCTGATTCTGAATCAGATGAGGATGTGCCGACTAAAGCACCAGCAGTAGCCAAGAAAAAGGAAGAATCCAGTGAAAGCTCTGATTCTGAAAGTGATTCAGACTCTGATGATGAGGCTGCTGCTGTTAAAAAGGAAGAAGAATCCAGTGATAGCTCAGACAGTGACTCTGAATCTGAGTCTGATTCTGATGAACCAGCAAAACCTACTATTCCTGCAAAAAGGCCACTGACAAAAGACACAAAGAAGGGACAATCCAAGGATGAATCTGAAGATAGTTCTGATGAGAGTTCTGAGGAAAGTGGTGATGAACCTCCGCAAAAGAAGATTAAGGATTCTACAACTTCTGGTACTACCAAGCCTTCCCCTAAGGCTACCAAGAAAGAAATCAGCAGTGATGACGAAAGTGATGAAGATGACAGTTCTGATGAAAGCTCTGATGAGGATGTTAAGCAAAAACAAACTCAAGCTAAGAAGCAAGCACCAGTAGCACAAGAGAGTAGCAGCTCCGATGAATCTTCTGAAGAAGATAGTGACATGGAAAGTGATGAACCAGCAAAAACTCCCCAAAAGAAGGAAACTGCTGTGTCTGTTGGTTCGAATAAGTCTGCGACAAAACCGGGACAAGAGGAACCAAAAACGCCTGCCAGCAACCAAAATCAAGCTACCGGGTCAAAGACTCTTTTTGTTGGAAATTTACCATACAATGTGGAGCAAGAACAAGTGAAGCAATTTTTCCAGGAGGCAGGTGAAGTTGTTGATATTCGTTTCAGTACCTTTGAAGATGGGAACTTCAGGGGCTTTGGACATGTTGAATTTGCCACAGCGGAAGCTGCTAAGAAGGCACTTGAACTTGCTGGTCATGACCTGATGGGACGGCCGGTCAGGCTTGACCTGGCTCGTGAGAGAGGCGCGTATACTCCTGGCAGCGGGAGGGACAATAGTTCTTTCAAGAAGCCTGCTCAAAGCTCAGGAAACACTATATTTATTAAAGGCTTTGATACTTCTCTTGACATACACCAGATCCGGAATTCACTTGAAGAACATTTTGGCTCGTGTGGAGAGATTACACGGGTTTCAATTCCAAAGGATTATGAAACCGGTGCAAGCAAAGGGATGGCGTACATGGATTTTGCGGACAACGGTTCCTTGTCGAAAGCATACGAACTGAATGGATCTGACCTCGGTGGATACAGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGCTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAGACGTGGTGGACGTGGTGATGGTAGCCGTGGGCGCGGTGACCGTGGACGTGGTAGAGGCTTTGGTAGGGGTGACAGGGGCCATGGTGGACGGGGTACACCGTTCAAGCAGAGCGCTGGTACACCTAGTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAG
Protein Sequence
- >LOC_Os04g52960.1
MGKSSKKSAVEVAPTSVSVSEGKSGKKGKRNAEDEIEKAVSAKKQKTVREKVVPSKEEAKKVKKQPPPKKVESSSSEEDSSESEEEVKAQPKKTVQPKKAAQPAKEESSDDSSDDSSSDDEPAKKPVARPNKAALSTNSSSSDDSSDESLSDDEPVKKPAAPLKKPVALATNGSKKVETDSSSSDSSSDEESDEDDKKTAAPVKKPSVAAIQKKTQESDSSDSDSDSESDEDVPTKAPAVAKKKEESSESSDSESDSDSDDEAAAVKKEEESSDSSDSDSESESDSDEPAKPTIPAKRPLTKDTKKGQSKDESEDSSDESSEESGDEPPQKKIKDSTTSGTTKPSPKATKKEISSDDESDEDDSSDESSDEDVKQKQTQAKKQAPVAQESSSSDESSEEDSDMESDEPAKTPQKKETAVSVGSNKSATKPGQEEPKTPASNQNQATGSKTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALELAGHDLMGRPVRLDLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIHQIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFADNGSLSKAYELNGSDLGGYSLYVDEARPRPDNNREGGFSGGRDFNSSGRGGRRGGRGDGSRGRGDRGRGRGFGRGDRGHGGRGTPFKQSAGTPSAGKKTTFGDDD*