Gene Details:

Functional Descriptions:

  • The expression pattern of OsKS2 in wild-type cv Dongjin, showed that it is expressed in all organs, most prominently in the stem and floral organs.
  • The putative OsKS2 gene was a chromosome 4-located ent-kaurene synthase (KS), encoding the enzyme that catalyses an early step of the GA biosynthesis pathway.
  • Reverse transcription PCR analyses of 22 candidate genes related to the gibberellin (GA) biosynthesis pathway revealed that among 22 candidate genes tested, a dwarf mutant transcript was not expressed only in one OsKS2 gene.
  • We propose that dwarfism in this mutant is caused by a point mutation in OsKS2, which plays a significant role in growth and development of higher plants.
  • Further investigation on OsKS2 and other OsKS-like proteins is underway and may yield better understanding of the putative role of OsKS in severe dwarf mutants.

Literature:

Gene Resources:

  • NCBI ID:
  • UniProt accessions:

Sequences:

cDNA Sequence
  • >LOC_Os04g52240.1
    ATGGTGCCGGCCCTCCGCCGTGGCGGCGGCGGCCCGCGGTTCCCGCAGTGCGTCGCGTGGATCCAGCGGAACCAGCGGGGCGACGGGTCATGGCGCCACGCGGCGGCGGCGCACCAGCAGCTCGGCTCCTCGCCGGAGATCGTCACCGAGCGCGACCTCTCGTCCACCCTCGCCTGCGTCCTCGCGCTCGCGCGATGGGACGCCGGCAGTGAGCACGTCAGGAGAGGGCTGCAGTTTATCGGGAGGAACATGTCGGTCGCCATGGACGATCAGACGGCTGCTCCGGCGTCTGGTTCCGTCGTCAGTTTCGCAGCGATGCTCCGGATGGCGATGGAGATGGGTTTGGAGGTTCCTGCCGTCAGCCAAGCTGACGTCCGCGACAGAGATGCTGGGGTGATCTGCCACGGTGGAAGAACAGAATATACGGCTTATGTCTCAGAAGGATTAGGCAATATTCAGAACTGGAATGAAGTGATGAAATTCCAAAGAAAGAATGGCTCACTGTTCAACTCCCCTTACACAACTGCAGCTGCATTAGTCCACAACTATGATGCCAAAGCTCTCCAGTACTTAGACATGCTTCTGGACAAATTTGGAAGTGCAGTGCCAGCGGCCTATCCTGCAAATATTCAGTCTCAGCTCTACATGGTGGATGTGCTTGAAAAGATGGGAATATCTAGGCATTTTGTTGGTGAGATAAAGAGCATACTGGACATGACCTACAGTTGCTGGAAACAGAGGGATGAGGAAATTGTGCTTGACATGCAAACATGTGGGATGGCATTTCGTATGTTGCGTATGAATGGATATGATGTTTCTTCAGATGAGCTATCTCATTTTTCTGAACCTTCAAGTTTCCACAATTCACTTCAAGGATATCTGAATGATACAAGATCTTTATTAGAATTACATAAGGCTTCAAAAGTCAGTATCGCAGAAAAGGAGGTTGAATATGCTCTTGAATTTCCCTTCTATACCATCTTGGATCGTCTAGACCATAAAAGAAATATCGAACATTTTGACATTACAAGCAGTCAGATGCTAGAAACAGCGTACTTGCCATGTCATTCCAATGAAGAAATCATGGCCTTGGGTGTGAGAGATTTTAGTAGCTCTCAGTTTATTTTCCAAGAAGAGCTGCAGCAACTCAACAGCTGGGTGAAAGAGAGCAGGTTGGATCAGCTGCAATTCGCACGGCAGAAGTTGGACTACTTCTATTTCTCTGCTGCTGCTACCATTTTCACTCCTGAACTGTCAGATGTTCGCATTTTGTGGGCCAAAAATGGCGTGCTGACAACGGTCGTCGACGACTTCTTCGACGTTGGAGGATCAAAAGAAGAACTGGAAAACCTCGTCGCATTAGTTGAGAAGTGGGACAAGAATGACAAAACTGAGTACTACTCTGAACAAGTAGAGATTGTGTTCTCTGCAATTTATACTTCAACTAACCAGCTTGGATCAATGGCCTCTGTAGTACAAGGCCGTGATGTCACCAAACACCTTGTAGAAATAGTAAGCATCATCTCTGACATACTTTGGAATTATTTTTTTTCAGAAGTGAGAACTGACAAGCTAAATATAGTGGCCTCTGTTAATCTGTGTATAGTGGCAAGAATTGCTGAGGTCTATGATGACAGAGGTAGAGTGGAGGCAGAGCCGCATTGTATCTTGTTGGACCAAAGATCCCTGATTCTGTCATAAGAAGCCAAGAATGCAGCGAGTTGTTCCGGCTAATGAGCAAATGTGGCCGTCTCCTGAATGATGTCCAATCCTACGAGAGAGAGGGCAGCCAGGGCAAGCTGAACAGCGTCTCTCTGCTTGCCCTCCACAGTGGAGGCTCTGTCTCCATGGAAGAGGCTGTGAAGCAGATTCAGAGACCCATCGAGAAATGCAGGAGAGAGTTGCTGAAGCTGGTCGTCAGCAGAGGAGGCGCCGTTCCAAGGCCATGCAGGGAGCTGTTCTGGAGCATGTGCAAGGTCTGCCACTTCTTCTACTCCGGCGGCGACGGGTTCAGCTCGCCGACGGCGAAGGCCGGCGCGTTGGACGCGATTCCTATATGTTTCGTGGAATGCGATGAGAAGAAGAAAAATGAGGAAGAGAGGATTGTTATATTTTGGGCCGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGTAAATAATAAAAAAATGGTGTTGTTATTATTTACTTGGGTCACGGGTGACGATGGTGGCGGTGCCGCCGAAGTCGCAGGTGCCACCGGCGGCCTTGGTCATCTGCCAGTAGCTGTTGAAGGCGTAGGAGGCGTGGGCGAGCACGACCCAGGCGTGCTCGGGGTGAAGCCAGGCGTGGACGACGCAGGCGGGCTCGGCTCGAACGACGGTGGCGTGAAGCCGCCGATGGGGGGCAGCGGCGGGGGCTGGTCGTCCGGGGCGAACGGCGTCGAGGCGAAGGGAGGTGTCGGCGTCGGTGTCGTTGTCGGGGTGGAGGACGACGGGGGCGCGTTCGGAGGGTTGACGCAGTACGGCGAGCTCGAGCCGTCGCCGGTGGCGTCGGCGAGGCTCGCCGCGTCGCCGTCCGGCTTCGCCGGAGAAGGAGACGAAGAAGGCAGCTGCATCGGCTCCACCGTCCTGATGAAGTTGAGCTTGTACAGCGCGTTCAGCAGCGTGTTCCTCCTGCTTCGCCTCATCAGAGCTCTCGCCTCTGCTCCATCAACAACAACAACAACCACACAATCAAATGCACATCAAAAACCAAACTAA
CDS Sequence
  • >LOC_Os04g52240.1
    ATGGTGCCGGCCCTCCGCCGTGGCGGCGGCGGCCCGCGGTTCCCGCAGTGCGTCGCGTGGATCCAGCGGAACCAGCGGGGCGACGGGTCATGGCGCCACGCGGCGGCGGCGCACCAGCAGCTCGGCTCCTCGCCGGAGATCGTCACCGAGCGCGACCTCTCGTCCACCCTCGCCTGCGTCCTCGCGCTCGCGCGATGGGACGCCGGCAGTGAGCACGTCAGGAGAGGGCTGCAGTTTATCGGGAGGAACATGTCGGTCGCCATGGACGATCAGACGGCTGCTCCGGCGTCTGGTTCCGTCGTCAGTTTCGCAGCGATGCTCCGGATGGCGATGGAGATGGGTTTGGAGGTTCCTGCCGTCAGCCAAGCTGACGTCCGCGACAGAGATGCTGGGGTGATCTGCCACGGTGGAAGAACAGAATATACGGCTTATGTCTCAGAAGGATTAGGCAATATTCAGAACTGGAATGAAGTGATGAAATTCCAAAGAAAGAATGGCTCACTGTTCAACTCCCCTTACACAACTGCAGCTGCATTAGTCCACAACTATGATGCCAAAGCTCTCCAGTACTTAGACATGCTTCTGGACAAATTTGGAAGTGCAGTGCCAGCGGCCTATCCTGCAAATATTCAGTCTCAGCTCTACATGGTGGATGTGCTTGAAAAGATGGGAATATCTAGGCATTTTGTTGGTGAGATAAAGAGCATACTGGACATGACCTACAGTTGCTGGAAACAGAGGGATGAGGAAATTGTGCTTGACATGCAAACATGTGGGATGGCATTTCGTATGTTGCGTATGAATGGATATGATGTTTCTTCAGATGAGCTATCTCATTTTTCTGAACCTTCAAGTTTCCACAATTCACTTCAAGGATATCTGAATGATACAAGATCTTTATTAGAATTACATAAGGCTTCAAAAGTCAGTATCGCAGAAAAGGAGGTTGAATATGCTCTTGAATTTCCCTTCTATACCATCTTGGATCGTCTAGACCATAAAAGAAATATCGAACATTTTGACATTACAAGCAGTCAGATGCTAGAAACAGCGTACTTGCCATGTCATTCCAATGAAGAAATCATGGCCTTGGGTGTGAGAGATTTTAGTAGCTCTCAGTTTATTTTCCAAGAAGAGCTGCAGCAACTCAACAGCTGGGTGAAAGAGAGCAGGTTGGATCAGCTGCAATTCGCACGGCAGAAGTTGGACTACTTCTATTTCTCTGCTGCTGCTACCATTTTCACTCCTGAACTGTCAGATGTTCGCATTTTGTGGGCCAAAAATGGCGTGCTGACAACGGTCGTCGACGACTTCTTCGACGTTGGAGGATCAAAAGAAGAACTGGAAAACCTCGTCGCATTAGTTGAGAAGTGGGACAAGAATGACAAAACTGAGTACTACTCTGAACAAGTAGAGATTGTGTTCTCTGCAATTTATACTTCAACTAACCAGCTTGGATCAATGGCCTCTGTAGTACAAGGCCGTGATGTCACCAAACACCTTGTAGAAATAGTAAGCATCATCTCTGACATACTTTGGAATTATTTTTTTTCAGAAGTGAGAACTGACAAGCTAAATATAGTGGCCTCTGTTAATCTGTGTATAGTGGCAAGAATTGCTGAGGTCTATGATGACAGAGGTAGAGTGGAGGCAGAGCCGCATTGTATCTTGTTGGACCAAAGATCCCTGATTCTGTCATAA
Protein Sequence
  • >LOC_Os04g52240.1
    MVPALRRGGGGPRFPQCVAWIQRNQRGDGSWRHAAAAHQQLGSSPEIVTERDLSSTLACVLALARWDAGSEHVRRGLQFIGRNMSVAMDDQTAAPASGSVVSFAAMLRMAMEMGLEVPAVSQADVRDRDAGVICHGGRTEYTAYVSEGLGNIQNWNEVMKFQRKNGSLFNSPYTTAAALVHNYDAKALQYLDMLLDKFGSAVPAAYPANIQSQLYMVDVLEKMGISRHFVGEIKSILDMTYSCWKQRDEEIVLDMQTCGMAFRMLRMNGYDVSSDELSHFSEPSSFHNSLQGYLNDTRSLLELHKASKVSIAEKEVEYALEFPFYTILDRLDHKRNIEHFDITSSQMLETAYLPCHSNEEIMALGVRDFSSSQFIFQEELQQLNSWVKESRLDQLQFARQKLDYFYFSAAATIFTPELSDVRILWAKNGVLTTVVDDFFDVGGSKEELENLVALVEKWDKNDKTEYYSEQVEIVFSAIYTSTNQLGSMASVVQGRDVTKHLVEIVSIISDILWNYFFSEVRTDKLNIVASVNLCIVARIAEVYDDRGRVEAEPHCILLDQRSLILS*