Information report for KS2;OsKS2
Gene Details
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Functional Descriptions
- The expression pattern of OsKS2 in wild-type cv Dongjin, showed that it is expressed in all organs, most prominently in the stem and floral organs.
- The putative OsKS2 gene was a chromosome 4-located ent-kaurene synthase (KS), encoding the enzyme that catalyses an early step of the GA biosynthesis pathway.
- Reverse transcription PCR analyses of 22 candidate genes related to the gibberellin (GA) biosynthesis pathway revealed that among 22 candidate genes tested, a dwarf mutant transcript was not expressed only in one OsKS2 gene.
- We propose that dwarfism in this mutant is caused by a point mutation in OsKS2, which plays a significant role in growth and development of higher plants.
- Further investigation on OsKS2 and other OsKS-like proteins is underway and may yield better understanding of the putative role of OsKS in severe dwarf mutants.
Literature and News
Sequences
cDNA Sequence
- >LOC_Os04g52240.1
ATGGTGCCGGCCCTCCGCCGTGGCGGCGGCGGCCCGCGGTTCCCGCAGTGCGTCGCGTGGATCCAGCGGAACCAGCGGGGCGACGGGTCATGGCGCCACGCGGCGGCGGCGCACCAGCAGCTCGGCTCCTCGCCGGAGATCGTCACCGAGCGCGACCTCTCGTCCACCCTCGCCTGCGTCCTCGCGCTCGCGCGATGGGACGCCGGCAGTGAGCACGTCAGGAGAGGGCTGCAGTTTATCGGGAGGAACATGTCGGTCGCCATGGACGATCAGACGGCTGCTCCGGCGTCTGGTTCCGTCGTCAGTTTCGCAGCGATGCTCCGGATGGCGATGGAGATGGGTTTGGAGGTTCCTGCCGTCAGCCAAGCTGACGTCCGCGACAGAGATGCTGGGGTGATCTGCCACGGTGGAAGAACAGAATATACGGCTTATGTCTCAGAAGGATTAGGCAATATTCAGAACTGGAATGAAGTGATGAAATTCCAAAGAAAGAATGGCTCACTGTTCAACTCCCCTTACACAACTGCAGCTGCATTAGTCCACAACTATGATGCCAAAGCTCTCCAGTACTTAGACATGCTTCTGGACAAATTTGGAAGTGCAGTGCCAGCGGCCTATCCTGCAAATATTCAGTCTCAGCTCTACATGGTGGATGTGCTTGAAAAGATGGGAATATCTAGGCATTTTGTTGGTGAGATAAAGAGCATACTGGACATGACCTACAGTTGCTGGAAACAGAGGGATGAGGAAATTGTGCTTGACATGCAAACATGTGGGATGGCATTTCGTATGTTGCGTATGAATGGATATGATGTTTCTTCAGATGAGCTATCTCATTTTTCTGAACCTTCAAGTTTCCACAATTCACTTCAAGGATATCTGAATGATACAAGATCTTTATTAGAATTACATAAGGCTTCAAAAGTCAGTATCGCAGAAAAGGAGGTTGAATATGCTCTTGAATTTCCCTTCTATACCATCTTGGATCGTCTAGACCATAAAAGAAATATCGAACATTTTGACATTACAAGCAGTCAGATGCTAGAAACAGCGTACTTGCCATGTCATTCCAATGAAGAAATCATGGCCTTGGGTGTGAGAGATTTTAGTAGCTCTCAGTTTATTTTCCAAGAAGAGCTGCAGCAACTCAACAGCTGGGTGAAAGAGAGCAGGTTGGATCAGCTGCAATTCGCACGGCAGAAGTTGGACTACTTCTATTTCTCTGCTGCTGCTACCATTTTCACTCCTGAACTGTCAGATGTTCGCATTTTGTGGGCCAAAAATGGCGTGCTGACAACGGTCGTCGACGACTTCTTCGACGTTGGAGGATCAAAAGAAGAACTGGAAAACCTCGTCGCATTAGTTGAGAAGTGGGACAAGAATGACAAAACTGAGTACTACTCTGAACAAGTAGAGATTGTGTTCTCTGCAATTTATACTTCAACTAACCAGCTTGGATCAATGGCCTCTGTAGTACAAGGCCGTGATGTCACCAAACACCTTGTAGAAATAGTAAGCATCATCTCTGACATACTTTGGAATTATTTTTTTTCAGAAGTGAGAACTGACAAGCTAAATATAGTGGCCTCTGTTAATCTGTGTATAGTGGCAAGAATTGCTGAGGTCTATGATGACAGAGGTAGAGTGGAGGCAGAGCCGCATTGTATCTTGTTGGACCAAAGATCCCTGATTCTGTCATAAGAAGCCAAGAATGCAGCGAGTTGTTCCGGCTAATGAGCAAATGTGGCCGTCTCCTGAATGATGTCCAATCCTACGAGAGAGAGGGCAGCCAGGGCAAGCTGAACAGCGTCTCTCTGCTTGCCCTCCACAGTGGAGGCTCTGTCTCCATGGAAGAGGCTGTGAAGCAGATTCAGAGACCCATCGAGAAATGCAGGAGAGAGTTGCTGAAGCTGGTCGTCAGCAGAGGAGGCGCCGTTCCAAGGCCATGCAGGGAGCTGTTCTGGAGCATGTGCAAGGTCTGCCACTTCTTCTACTCCGGCGGCGACGGGTTCAGCTCGCCGACGGCGAAGGCCGGCGCGTTGGACGCGATTCCTATATGTTTCGTGGAATGCGATGAGAAGAAGAAAAATGAGGAAGAGAGGATTGTTATATTTTGGGCCGAGAAGAAGGAGAAGGAGAAGGAGAAGGAGAGGGTAAATAATAAAAAAATGGTGTTGTTATTATTTACTTGGGTCACGGGTGACGATGGTGGCGGTGCCGCCGAAGTCGCAGGTGCCACCGGCGGCCTTGGTCATCTGCCAGTAGCTGTTGAAGGCGTAGGAGGCGTGGGCGAGCACGACCCAGGCGTGCTCGGGGTGAAGCCAGGCGTGGACGACGCAGGCGGGCTCGGCTCGAACGACGGTGGCGTGAAGCCGCCGATGGGGGGCAGCGGCGGGGGCTGGTCGTCCGGGGCGAACGGCGTCGAGGCGAAGGGAGGTGTCGGCGTCGGTGTCGTTGTCGGGGTGGAGGACGACGGGGGCGCGTTCGGAGGGTTGACGCAGTACGGCGAGCTCGAGCCGTCGCCGGTGGCGTCGGCGAGGCTCGCCGCGTCGCCGTCCGGCTTCGCCGGAGAAGGAGACGAAGAAGGCAGCTGCATCGGCTCCACCGTCCTGATGAAGTTGAGCTTGTACAGCGCGTTCAGCAGCGTGTTCCTCCTGCTTCGCCTCATCAGAGCTCTCGCCTCTGCTCCATCAACAACAACAACAACCACACAATCAAATGCACATCAAAAACCAAACTAA
CDS Sequence
- >LOC_Os04g52240.1
ATGGTGCCGGCCCTCCGCCGTGGCGGCGGCGGCCCGCGGTTCCCGCAGTGCGTCGCGTGGATCCAGCGGAACCAGCGGGGCGACGGGTCATGGCGCCACGCGGCGGCGGCGCACCAGCAGCTCGGCTCCTCGCCGGAGATCGTCACCGAGCGCGACCTCTCGTCCACCCTCGCCTGCGTCCTCGCGCTCGCGCGATGGGACGCCGGCAGTGAGCACGTCAGGAGAGGGCTGCAGTTTATCGGGAGGAACATGTCGGTCGCCATGGACGATCAGACGGCTGCTCCGGCGTCTGGTTCCGTCGTCAGTTTCGCAGCGATGCTCCGGATGGCGATGGAGATGGGTTTGGAGGTTCCTGCCGTCAGCCAAGCTGACGTCCGCGACAGAGATGCTGGGGTGATCTGCCACGGTGGAAGAACAGAATATACGGCTTATGTCTCAGAAGGATTAGGCAATATTCAGAACTGGAATGAAGTGATGAAATTCCAAAGAAAGAATGGCTCACTGTTCAACTCCCCTTACACAACTGCAGCTGCATTAGTCCACAACTATGATGCCAAAGCTCTCCAGTACTTAGACATGCTTCTGGACAAATTTGGAAGTGCAGTGCCAGCGGCCTATCCTGCAAATATTCAGTCTCAGCTCTACATGGTGGATGTGCTTGAAAAGATGGGAATATCTAGGCATTTTGTTGGTGAGATAAAGAGCATACTGGACATGACCTACAGTTGCTGGAAACAGAGGGATGAGGAAATTGTGCTTGACATGCAAACATGTGGGATGGCATTTCGTATGTTGCGTATGAATGGATATGATGTTTCTTCAGATGAGCTATCTCATTTTTCTGAACCTTCAAGTTTCCACAATTCACTTCAAGGATATCTGAATGATACAAGATCTTTATTAGAATTACATAAGGCTTCAAAAGTCAGTATCGCAGAAAAGGAGGTTGAATATGCTCTTGAATTTCCCTTCTATACCATCTTGGATCGTCTAGACCATAAAAGAAATATCGAACATTTTGACATTACAAGCAGTCAGATGCTAGAAACAGCGTACTTGCCATGTCATTCCAATGAAGAAATCATGGCCTTGGGTGTGAGAGATTTTAGTAGCTCTCAGTTTATTTTCCAAGAAGAGCTGCAGCAACTCAACAGCTGGGTGAAAGAGAGCAGGTTGGATCAGCTGCAATTCGCACGGCAGAAGTTGGACTACTTCTATTTCTCTGCTGCTGCTACCATTTTCACTCCTGAACTGTCAGATGTTCGCATTTTGTGGGCCAAAAATGGCGTGCTGACAACGGTCGTCGACGACTTCTTCGACGTTGGAGGATCAAAAGAAGAACTGGAAAACCTCGTCGCATTAGTTGAGAAGTGGGACAAGAATGACAAAACTGAGTACTACTCTGAACAAGTAGAGATTGTGTTCTCTGCAATTTATACTTCAACTAACCAGCTTGGATCAATGGCCTCTGTAGTACAAGGCCGTGATGTCACCAAACACCTTGTAGAAATAGTAAGCATCATCTCTGACATACTTTGGAATTATTTTTTTTCAGAAGTGAGAACTGACAAGCTAAATATAGTGGCCTCTGTTAATCTGTGTATAGTGGCAAGAATTGCTGAGGTCTATGATGACAGAGGTAGAGTGGAGGCAGAGCCGCATTGTATCTTGTTGGACCAAAGATCCCTGATTCTGTCATAA
Protein Sequence
- >LOC_Os04g52240.1
MVPALRRGGGGPRFPQCVAWIQRNQRGDGSWRHAAAAHQQLGSSPEIVTERDLSSTLACVLALARWDAGSEHVRRGLQFIGRNMSVAMDDQTAAPASGSVVSFAAMLRMAMEMGLEVPAVSQADVRDRDAGVICHGGRTEYTAYVSEGLGNIQNWNEVMKFQRKNGSLFNSPYTTAAALVHNYDAKALQYLDMLLDKFGSAVPAAYPANIQSQLYMVDVLEKMGISRHFVGEIKSILDMTYSCWKQRDEEIVLDMQTCGMAFRMLRMNGYDVSSDELSHFSEPSSFHNSLQGYLNDTRSLLELHKASKVSIAEKEVEYALEFPFYTILDRLDHKRNIEHFDITSSQMLETAYLPCHSNEEIMALGVRDFSSSQFIFQEELQQLNSWVKESRLDQLQFARQKLDYFYFSAAATIFTPELSDVRILWAKNGVLTTVVDDFFDVGGSKEELENLVALVEKWDKNDKTEYYSEQVEIVFSAIYTSTNQLGSMASVVQGRDVTKHLVEIVSIISDILWNYFFSEVRTDKLNIVASVNLCIVARIAEVYDDRGRVEAEPHCILLDQRSLILS*